RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 OTOP1Q7RTM1 612 aa21.09■□□□□ 0.97
TVP23A-209ENST00000575135 VPS37DQ86XT2 251 aa21.09■□□□□ 0.97
TVP23A-209ENST00000575135 MRPL50Q8N5N7 158 aaKnown RBP21.09■□□□□ 0.97
TVP23A-209ENST00000575135 TEPSINQ96N21 525 aa21.09■□□□□ 0.97
TVP23A-209ENST00000575135 PTPN18Q99952 460 aa21.09■□□□□ 0.97
TVP23A-209ENST00000575135 MKI67P46013 3256 aaKnown RBP21.09■□□□□ 0.97
TVP23A-209ENST00000575135 CHAF1AQ13111 956 aaPredicted RBP21.08■□□□□ 0.97
TVP23A-209ENST00000575135 CRHR2Q13324 411 aa21.08■□□□□ 0.97
TVP23A-209ENST00000575135 OTUD7BQ6GQQ9 843 aa21.08■□□□□ 0.97
TVP23A-209ENST00000575135 ANKRD44Q8N8A2 993 aa21.08■□□□□ 0.97
TVP23A-209ENST00000575135 ARAP2Q8WZ64 1704 aa21.08■□□□□ 0.97
TVP23A-209ENST00000575135 OPTNQ96CV9 577 aa21.08■□□□□ 0.97
TVP23A-209ENST00000575135 TMEM39BQ9GZU3 492 aa21.08■□□□□ 0.97
TVP23A-209ENST00000575135 OTOFQ9HC10 1997 aa21.08■□□□□ 0.96
TVP23A-209ENST00000575135 ZNF521Q96K83 1311 aa21.07■□□□□ 0.96
TVP23A-209ENST00000575135 TESPA1A2RU30 521 aaPredicted RBP21.07■□□□□ 0.96
TVP23A-209ENST00000575135 METTL24Q5JXM2 366 aa21.07■□□□□ 0.96
TVP23A-209ENST00000575135 PRPF38BQ5VTL8 546 aaKnown RBP21.07■□□□□ 0.96
TVP23A-209ENST00000575135 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.06■□□□□ 0.96
TVP23A-209ENST00000575135 KLHDC4Q8TBB5 520 aa21.06■□□□□ 0.96
TVP23A-209ENST00000575135 CD99L2Q8TCZ2 262 aa21.06■□□□□ 0.96
TVP23A-209ENST00000575135 FRAT2O75474 233 aaPredicted RBP21.05■□□□□ 0.96
TVP23A-209ENST00000575135 PDE8BO95263 885 aa21.05■□□□□ 0.96
TVP23A-209ENST00000575135 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
TVP23A-209ENST00000575135 TNNI2P48788 182 aa21.05■□□□□ 0.96
TVP23A-209ENST00000575135 CAVIN4Q5BKX8 364 aa21.05■□□□□ 0.96
TVP23A-209ENST00000575135 VGLL2Q8N8G2 317 aa21.05■□□□□ 0.96
TVP23A-209ENST00000575135 TBC1D22AQ8WUA7 517 aa21.05■□□□□ 0.96
TVP23A-209ENST00000575135 CNKSR2Q8WXI2 1034 aa21.05■□□□□ 0.96
TVP23A-209ENST00000575135 ERO1AQ96HE7 468 aa21.05■□□□□ 0.96
TVP23A-209ENST00000575135 MS4A4AQ96JQ5 239 aa21.05■□□□□ 0.96
TVP23A-209ENST00000575135 BCAMP50895 628 aa21.04■□□□□ 0.96
TVP23A-209ENST00000575135 CACNB3P54284 484 aa21.04■□□□□ 0.96
TVP23A-209ENST00000575135 MAP3K9P80192 1104 aa21.04■□□□□ 0.96
TVP23A-209ENST00000575135 HDLBPQ00341 1268 aaKnown RBP21.04■□□□□ 0.96
TVP23A-209ENST00000575135 PTPRCP08575 1304 aa21.04■□□□□ 0.96
TVP23A-209ENST00000575135 SP3Q02447 781 aa21.03■□□□□ 0.96
TVP23A-209ENST00000575135 VGLL4Q14135 290 aa21.03■□□□□ 0.96
TVP23A-209ENST00000575135 TEKT1Q969V4 418 aa21.03■□□□□ 0.96
TVP23A-209ENST00000575135 USP44Q9H0E7 712 aa21.03■□□□□ 0.96
TVP23A-209ENST00000575135 PTPN22Q9Y2R2 807 aa21.03■□□□□ 0.96
TVP23A-209ENST00000575135 CAP1Q01518 475 aa21.02■□□□□ 0.96
TVP23A-209ENST00000575135 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.02■□□□□ 0.96
TVP23A-209ENST00000575135 BRI3BPQ8WY22 251 aa21.02■□□□□ 0.96
TVP23A-209ENST00000575135 SSH1Q8WYL5 1049 aa21.02■□□□□ 0.96
TVP23A-209ENST00000575135 EFCC1Q9HA90 598 aa21.02■□□□□ 0.96
TVP23A-209ENST00000575135 BRCA2P51587 3418 aa21.01■□□□□ 0.95
TVP23A-209ENST00000575135 CCL15-CCL14A0A0B4J2E2 113 aa21.01■□□□□ 0.95
TVP23A-209ENST00000575135 CCL15Q16663 113 aa21.01■□□□□ 0.95
TVP23A-209ENST00000575135 INTS3Q68E01 1043 aaKnown RBP21.01■□□□□ 0.95
TVP23A-209ENST00000575135 CSADQ9Y600 493 aa21.01■□□□□ 0.95
TVP23A-209ENST00000575135 KIAA0100Q14667 2235 aaKnown RBP21■□□□□ 0.95
TVP23A-209ENST00000575135 POTEFA5A3E0 1075 aa21■□□□□ 0.95
TVP23A-209ENST00000575135 GTF2A2P52657 109 aa21■□□□□ 0.95
TVP23A-209ENST00000575135 APOBEC3HQ6NTF7 200 aaKnown RBP21■□□□□ 0.95
TVP23A-209ENST00000575135 OTUD5Q96G74 571 aa21■□□□□ 0.95
TVP23A-209ENST00000575135 ZDHHC15Q96MV8 337 aa21■□□□□ 0.95
TVP23A-209ENST00000575135 MRIQ9BWK5 157 aa21■□□□□ 0.95
TVP23A-209ENST00000575135 FGFR2P21802 821 aa20.99■□□□□ 0.95
TVP23A-209ENST00000575135 PUM3Q15397 648 aaKnown RBP20.99■□□□□ 0.95
TVP23A-209ENST00000575135 E9PSI1 815 aa20.98■□□□□ 0.95
TVP23A-209ENST00000575135 IFIT1P09914 478 aaKnown RBP20.98■□□□□ 0.95
TVP23A-209ENST00000575135 TAF1CQ15572 869 aaPredicted RBP20.98■□□□□ 0.95
TVP23A-209ENST00000575135 FAM83AQ86UY5 434 aa20.98■□□□□ 0.95
TVP23A-209ENST00000575135 FAM43AQ8N2R8 423 aa20.98■□□□□ 0.95
TVP23A-209ENST00000575135 ZFYVE28Q9HCC9 887 aa20.98■□□□□ 0.95
TVP23A-209ENST00000575135 TMOD2Q9NZR1 351 aa20.98■□□□□ 0.95
TVP23A-209ENST00000575135 SUGT1Q9Y2Z0 365 aa20.98■□□□□ 0.95
TVP23A-209ENST00000575135 KIF16BQ96L93 1317 aa20.98■□□□□ 0.95
TVP23A-209ENST00000575135 SPDYE5A6NIY4 337 aa20.97■□□□□ 0.95
TVP23A-209ENST00000575135 RFX5P48382 616 aaPredicted RBP20.97■□□□□ 0.95
TVP23A-209ENST00000575135 FKBP1CQ5VVH2 108 aa20.97■□□□□ 0.95
TVP23A-209ENST00000575135 ARMC5Q96C12 935 aa20.97■□□□□ 0.95
TVP23A-209ENST00000575135 SNCAIPQ9Y6H5 919 aa20.97■□□□□ 0.95
TVP23A-209ENST00000575135 EYA2O00167 538 aa20.96■□□□□ 0.95
TVP23A-209ENST00000575135 HHIPL2Q6UWX4 724 aa20.96■□□□□ 0.95
TVP23A-209ENST00000575135 ZKSCAN4Q969J2 545 aaPredicted RBP20.96■□□□□ 0.95
TVP23A-209ENST00000575135 WRNIP1Q96S55 665 aa20.96■□□□□ 0.95
TVP23A-209ENST00000575135 MAST3O60307 1309 aa20.96■□□□□ 0.95
TVP23A-209ENST00000575135 SLFN5Q08AF3 891 aa20.95■□□□□ 0.94
TVP23A-209ENST00000575135 ERO1BQ86YB8 467 aa20.95■□□□□ 0.94
TVP23A-209ENST00000575135 PCDH10Q9P2E7 1040 aa20.95■□□□□ 0.94
TVP23A-209ENST00000575135 SLC5A1P13866 664 aa20.94■□□□□ 0.94
TVP23A-209ENST00000575135 ATG9AQ7Z3C6 839 aa20.94■□□□□ 0.94
TVP23A-209ENST00000575135 WDR66Q8TBY9 1149 aa20.94■□□□□ 0.94
TVP23A-209ENST00000575135 LPIN2Q92539 896 aa20.94■□□□□ 0.94
TVP23A-209ENST00000575135 HOOK2Q96ED9 719 aa20.94■□□□□ 0.94
TVP23A-209ENST00000575135 MYH13Q9UKX3 1938 aa20.94■□□□□ 0.94
TVP23A-209ENST00000575135 RBBP6Q7Z6E9 1792 aaKnown RBP20.93■□□□□ 0.94
TVP23A-209ENST00000575135 IRF6O14896 467 aa20.93■□□□□ 0.94
TVP23A-209ENST00000575135 CETPP11597 493 aa20.93■□□□□ 0.94
TVP23A-209ENST00000575135 EN2P19622 333 aaPredicted RBP20.93■□□□□ 0.94
TVP23A-209ENST00000575135 ARHGEF6Q15052 776 aa20.93■□□□□ 0.94
TVP23A-209ENST00000575135 ALDH1L2Q3SY69 923 aa20.93■□□□□ 0.94
TVP23A-209ENST00000575135 MIGA2Q7L4E1 593 aa20.93■□□□□ 0.94
TVP23A-209ENST00000575135 DCAF15Q66K64 600 aa20.92■□□□□ 0.94
TVP23A-209ENST00000575135 CDCA7LQ96GN5 454 aa20.92■□□□□ 0.94
TVP23A-209ENST00000575135 BTBD19C9JJ37 291 aa20.91■□□□□ 0.94
TVP23A-209ENST00000575135 WDHD1O75717 1129 aaPredicted RBP20.91■□□□□ 0.94
TVP23A-209ENST00000575135 PPIL2Q13356 520 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms