RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 ARID5AQ03989 594 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 TMX1Q9H3N1 280 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 PPP2R5EQ16537 467 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 CCDC38Q502W7 563 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 IFT20Q8IY31 132 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.22□□□□□ -0.61
USP6-205ENST00000574788 TMEM110-MUSTN1A8MSY1 372 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 FAM212AQ96EL1 285 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 PPANQ9NQ55 473 aaKnown RBP11.22□□□□□ -0.61
USP6-205ENST00000574788 PRDM10Q9NQV6 1147 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 SLFN5Q08AF3 891 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 RNF34Q969K3 372 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
USP6-205ENST00000574788 KIF14Q15058 1648 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 SLC12A2P55011 1212 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 ARHGAP4P98171 946 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 RTL1A6NKG5 1358 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 GOLGA8CPA6NN73 597 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 GJC1P36383 396 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 TERF1P54274 439 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 ZKSCAN3Q9BRR0 538 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 TRIM6Q9C030 488 aaPredicted RBP11.21□□□□□ -0.61
USP6-205ENST00000574788 Q9H521 79 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 ZC3H6P61129 1189 aaKnown RBP11.21□□□□□ -0.61
USP6-205ENST00000574788 ANO6Q4KMQ2 910 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 ZNF622Q969S3 477 aaKnown RBP eCLIP11.21□□□□□ -0.61
USP6-205ENST00000574788 FLIIQ13045 1269 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 HAUS3Q68CZ6 603 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 IFT81Q8WYA0 676 aa11.21□□□□□ -0.61
USP6-205ENST00000574788 RAD50Q92878 1312 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 ZNF365Q70YC5 407 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 UBE3BQ7Z3V4 1068 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 TEKT1Q969V4 418 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 IQCDQ96DY2 449 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 ANKFY1Q9P2R3 1169 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 CNNM4Q6P4Q7 775 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 PANK2Q9BZ23 570 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.62
USP6-205ENST00000574788 NOD1Q9Y239 953 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 BACH1O14867 736 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 SPOPO43791 374 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 LMOD1P29536 600 aaPredicted RBP11.21□□□□□ -0.62
USP6-205ENST00000574788 SYCE1Q8N0S2 351 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 PPP4R1Q8TF05 950 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 JDP2Q8WYK2 163 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 SIRT1Q96EB6 747 aa11.21□□□□□ -0.62
USP6-205ENST00000574788 NAA16Q6N069 864 aaPredicted RBP11.2□□□□□ -0.62
USP6-205ENST00000574788 TFIP11Q9UBB9 837 aaKnown RBP11.2□□□□□ -0.62
USP6-205ENST00000574788 BAG5Q9UL15 447 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 LPXNO60711 386 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 KRT3P12035 628 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 P4HA1P13674 534 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 IRX3P78415 501 aaPredicted RBP11.2□□□□□ -0.62
USP6-205ENST00000574788 RPS6KA2Q15349 733 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 GPHNQ9NQX3 736 aaPredicted RBP11.2□□□□□ -0.62
USP6-205ENST00000574788 PARP2Q9UGN5 583 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 FAN1Q9Y2M0 1017 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 SNRPA1P09661 255 aaKnown RBP11.2□□□□□ -0.62
USP6-205ENST00000574788 PLCD1P51178 756 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 SDCCAG3Q96C92 435 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 NLRP3Q96P20 1036 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 RTEL1Q9NZ71 1219 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 TRERF1Q96PN7 1200 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 KLF18A0A0U1RQI7 1052 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 MAIP1Q8WWC4 291 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 HAUS1Q96CS2 278 aa11.2□□□□□ -0.62
USP6-205ENST00000574788 P3H4Q92791 437 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 FAM8A1Q9UBU6 413 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 TSKSQ9UJT2 592 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 UAP1Q16222 522 aaPredicted RBP11.19□□□□□ -0.62
USP6-205ENST00000574788 RNF10Q8N5U6 811 aaKnown RBP11.19□□□□□ -0.62
USP6-205ENST00000574788 ARHGEF2Q92974 986 aaKnown RBP11.19□□□□□ -0.62
USP6-205ENST00000574788 VPS18Q9P253 973 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 GUCA1BQ9UMX6 200 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 MAP3K2Q9Y2U5 619 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 NUP58Q9BVL2 599 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 CD2APQ9Y5K6 639 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 CALUO43852 315 aaPredicted RBP11.19□□□□□ -0.62
USP6-205ENST00000574788 KRT5P13647 590 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 TLDC2A0PJX2 215 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 SPTLC2O15270 562 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 BUB1BO60566 1050 aaPredicted RBP11.19□□□□□ -0.62
USP6-205ENST00000574788 SSH1Q8WYL5 1049 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
USP6-205ENST00000574788 INPP1P49441 399 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 YWHAEP62258 255 aaKnown RBP11.19□□□□□ -0.62
USP6-205ENST00000574788 BCRP11274 1271 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 HCLS1P14317 486 aaPredicted RBP11.19□□□□□ -0.62
USP6-205ENST00000574788 STRN3Q13033 797 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 IFNL2Q8IZJ0 200 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 RIOK1Q9BRS2 568 aaKnown RBP11.19□□□□□ -0.62
USP6-205ENST00000574788 CARD10Q9BWT7 1032 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 RASSF4Q9H2L5 321 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 TPCN1Q9ULQ1 816 aa11.19□□□□□ -0.62
USP6-205ENST00000574788 MTMR3Q13615 1198 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 BIRC3Q13489 604 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 NOLC1Q14978 699 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP6-205ENST00000574788 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms