RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 RTFDC1Q9BY42 306 aaPredicted RBP6.98□□□□□ -1.29
TRIM25-208ENST00000574234 LGR6Q9HBX8 967 aa6.98□□□□□ -1.29
TRIM25-208ENST00000574234 SCN9AQ15858 1988 aa6.98□□□□□ -1.29
TRIM25-208ENST00000574234 DUOX1Q9NRD9 1551 aa6.98□□□□□ -1.29
TRIM25-208ENST00000574234 RNMTO43148 476 aaKnown RBP6.97□□□□□ -1.29
TRIM25-208ENST00000574234 ERCC3P19447 782 aa6.97□□□□□ -1.29
TRIM25-208ENST00000574234 NR1H3Q13133 447 aa6.97□□□□□ -1.29
TRIM25-208ENST00000574234 PROX2Q3B8N5 592 aa6.97□□□□□ -1.29
TRIM25-208ENST00000574234 SWT1Q5T5J6 900 aaKnown RBP6.97□□□□□ -1.29
TRIM25-208ENST00000574234 TTC5Q8N0Z6 440 aa6.97□□□□□ -1.29
TRIM25-208ENST00000574234 CDCA5Q96FF9 252 aa6.97□□□□□ -1.29
TRIM25-208ENST00000574234 ZNF496Q96IT1 587 aaPredicted RBP6.97□□□□□ -1.29
TRIM25-208ENST00000574234 ZNF333Q96JL9 665 aa6.97□□□□□ -1.29
TRIM25-208ENST00000574234 CRAMP1Q96RY5 1269 aa6.97□□□□□ -1.29
TRIM25-208ENST00000574234 CARD14Q9BXL6 1004 aa6.97□□□□□ -1.29
TRIM25-208ENST00000574234 NOVA2Q9UNW9 492 aaKnown RBP6.97□□□□□ -1.29
TRIM25-208ENST00000574234 ECM29Q5VYK3 1845 aa6.97□□□□□ -1.29
TRIM25-208ENST00000574234 IBTKQ9P2D0 1353 aaPredicted RBP6.96□□□□□ -1.29
TRIM25-208ENST00000574234 PRUNE2Q8WUY3 3088 aa6.96□□□□□ -1.29
TRIM25-208ENST00000574234 SHTN1A0MZ66 631 aa6.96□□□□□ -1.3
TRIM25-208ENST00000574234 PIK3CDO00329 1044 aa6.96□□□□□ -1.3
TRIM25-208ENST00000574234 SOX1O00570 391 aaPredicted RBP6.96□□□□□ -1.3
TRIM25-208ENST00000574234 PPEF1O14829 653 aaPredicted RBP6.96□□□□□ -1.3
TRIM25-208ENST00000574234 ARID4AP29374 1257 aaPredicted RBP6.96□□□□□ -1.3
TRIM25-208ENST00000574234 KIAA2012Q0VF49 1180 aa6.96□□□□□ -1.3
TRIM25-208ENST00000574234 SAMD7Q7Z3H4 446 aa6.96□□□□□ -1.3
TRIM25-208ENST00000574234 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRIM25-208ENST00000574234 SYMPKQ92797 1274 aaKnown RBP6.96□□□□□ -1.3
TRIM25-208ENST00000574234 RPGRQ92834 1020 aaKnown RBP6.96□□□□□ -1.3
TRIM25-208ENST00000574234 ERO1AQ96HE7 468 aa6.96□□□□□ -1.3
TRIM25-208ENST00000574234 LRCH3Q96II8 777 aa6.96□□□□□ -1.3
TRIM25-208ENST00000574234 NYXQ9GZU5 481 aa6.96□□□□□ -1.3
TRIM25-208ENST00000574234 TMX4Q9H1E5 349 aaPredicted RBP6.96□□□□□ -1.3
TRIM25-208ENST00000574234 KIAA1522Q9P206 1035 aaPredicted RBP6.96□□□□□ -1.3
TRIM25-208ENST00000574234 NIP7Q9Y221 180 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRIM25-208ENST00000574234 ABCC12Q96J65 1359 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 RIMBP2O15034 1052 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 RAD17O75943 681 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 EGFRP00533 1210 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 A1BGP04217 495 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 RPS12P25398 132 aaKnown RBP6.95□□□□□ -1.3
TRIM25-208ENST00000574234 GTF2E1P29083 439 aaPredicted RBP6.95□□□□□ -1.3
TRIM25-208ENST00000574234 PLA2G5P39877 138 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 FUT2Q10981 343 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 ZNF790Q6PG37 636 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 NBPF11Q86T75 865 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 PLEKHM2Q8IWE5 1019 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 R3HDMLQ9H3Y0 253 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 ATP6V0A2Q9Y487 856 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 SSC5DA1L4H1 1573 aa6.95□□□□□ -1.3
TRIM25-208ENST00000574234 PRAMEF22A3QJZ6 481 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L3A6NCW0 530 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L4A6NCW7 530 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 YDJCA8MPS7 323 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 FBXO45P0C2W1 286 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 INHBEP58166 350 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 TBC1D10BQ4KMP7 808 aaPredicted RBP6.94□□□□□ -1.3
TRIM25-208ENST00000574234 SULT6B1Q6IMI4 303 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L2Q6R6M4 530 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L1Q7RTZ2 530 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 RBM17Q96I25 401 aaKnown RBP6.94□□□□□ -1.3
TRIM25-208ENST00000574234 GGA3Q9NZ52 723 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 KIAA1468Q9P260 1216 aa6.94□□□□□ -1.3
TRIM25-208ENST00000574234 ZSWIM8A7E2V4 1837 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 FAM196BA6NMK8 535 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 KIF4BQ2VIQ3 1234 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 DESI1Q6ICB0 168 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 MPNDQ8N594 471 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 DEFB123Q8N688 67 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 DPF3Q92784 378 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 FMNL2Q96PY5 1086 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 HTATIP2Q9BUP3 242 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 EFCC1Q9HA90 598 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 NR2E3Q9Y5X4 410 aa6.93□□□□□ -1.3
TRIM25-208ENST00000574234 SOWAHDA6NJG2 315 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 ZBBXA8MT70 800 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L5A8MUK1 530 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 SKIP12755 728 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 TNNT2P45379 298 aaPredicted RBP6.92□□□□□ -1.3
TRIM25-208ENST00000574234 SLC4A8Q2Y0W8 1093 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 SLC9C1Q4G0N8 1177 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 DPP8Q6V1X1 898 aaPredicted RBP6.92□□□□□ -1.3
TRIM25-208ENST00000574234 SLC51AQ86UW1 340 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 RETREG3Q86VR2 466 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 MRRFQ96E11 262 aaKnown RBP6.92□□□□□ -1.3
TRIM25-208ENST00000574234 MTMR10Q9NXD2 777 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 MGAMO43451 1857 aa6.92□□□□□ -1.3
TRIM25-208ENST00000574234 OTOFQ9HC10 1997 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 MANSC4A6NHS7 340 aaPredicted RBP6.91□□□□□ -1.3
TRIM25-208ENST00000574234 FAM177BA6PVY3 158 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L15C9J2P7 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L10C9JJH3 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L13C9JLJ4 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L12C9JPN9 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L11C9JVI0 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L21D6R901 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L18D6R9N7 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L22D6RA61 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L17D6RBQ6 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L19D6RCP7 530 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms