RNA–Protein interactions for RNA: ENST00000574096.1

NDC80-202, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 3

Gene NDC80, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-202ENST00000574096 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
NDC80-202ENST00000574096 CRAMP1Q96RY5 1269 aa13.62□□□□□ -0.23
NDC80-202ENST00000574096 KDM2BQ8NHM5 1336 aa13.62□□□□□ -0.23
NDC80-202ENST00000574096 GLTPD2A6NH11 291 aa13.61□□□□□ -0.23
NDC80-202ENST00000574096 WNT7AO00755 349 aa13.61□□□□□ -0.23
NDC80-202ENST00000574096 FKBP4Q02790 459 aaKnown RBP eCLIP13.61□□□□□ -0.23
NDC80-202ENST00000574096 TWISTNBQ3B726 338 aaPredicted RBP13.61□□□□□ -0.23
NDC80-202ENST00000574096 FAM89AQ96GI7 184 aa13.61□□□□□ -0.23
NDC80-202ENST00000574096 RBM17Q96I25 401 aaKnown RBP13.61□□□□□ -0.23
NDC80-202ENST00000574096 RRAGCQ9HB90 399 aa13.61□□□□□ -0.23
NDC80-202ENST00000574096 ZNF277Q9NRM2 450 aaPredicted RBP13.61□□□□□ -0.23
NDC80-202ENST00000574096 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
NDC80-202ENST00000574096 ARFGEF2Q9Y6D5 1785 aa13.6□□□□□ -0.23
NDC80-202ENST00000574096 TNFRSF10AO00220 468 aa13.6□□□□□ -0.23
NDC80-202ENST00000574096 G2E3Q7L622 706 aa13.6□□□□□ -0.23
NDC80-202ENST00000574096 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
NDC80-202ENST00000574096 ABCC4O15439 1325 aa13.6□□□□□ -0.23
NDC80-202ENST00000574096 POTECB2RU33 542 aa13.59□□□□□ -0.23
NDC80-202ENST00000574096 VAMP4O75379 141 aa13.59□□□□□ -0.23
NDC80-202ENST00000574096 TOMM70O94826 608 aa13.59□□□□□ -0.23
NDC80-202ENST00000574096 CTHP32929 405 aa13.59□□□□□ -0.23
NDC80-202ENST00000574096 SH3BP2P78314 561 aa13.59□□□□□ -0.23
NDC80-202ENST00000574096 LRRN4Q8WUT4 740 aa13.59□□□□□ -0.23
NDC80-202ENST00000574096 MYD88Q99836 296 aa13.59□□□□□ -0.23
NDC80-202ENST00000574096 ZNF521Q96K83 1311 aa13.59□□□□□ -0.23
NDC80-202ENST00000574096 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
NDC80-202ENST00000574096 FOXC1Q12948 553 aa13.58□□□□□ -0.24
NDC80-202ENST00000574096 CC2D2BQ6DHV5 1058 aa13.58□□□□□ -0.24
NDC80-202ENST00000574096 PSMD1Q99460 953 aa13.58□□□□□ -0.24
NDC80-202ENST00000574096 METTL22Q9BUU2 404 aaPredicted RBP13.58□□□□□ -0.24
NDC80-202ENST00000574096 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.24
NDC80-202ENST00000574096 MAP3K2Q9Y2U5 619 aa13.58□□□□□ -0.24
NDC80-202ENST00000574096 ANKRD36CQ5JPF3 1778 aa13.58□□□□□ -0.24
NDC80-202ENST00000574096 PI4KAP2A4QPH2 592 aa13.57□□□□□ -0.24
NDC80-202ENST00000574096 IARSP41252 1262 aaKnown RBP13.57□□□□□ -0.24
NDC80-202ENST00000574096 SF3B3Q15393 1217 aaKnown RBP13.57□□□□□ -0.24
NDC80-202ENST00000574096 KSR2Q6VAB6 950 aa13.57□□□□□ -0.24
NDC80-202ENST00000574096 PI4KAP1Q8N8J0 262 aa13.57□□□□□ -0.24
NDC80-202ENST00000574096 ZBTB38Q8NAP3 1195 aaPredicted RBP13.57□□□□□ -0.24
NDC80-202ENST00000574096 BAP1Q92560 729 aa13.57□□□□□ -0.24
NDC80-202ENST00000574096 TOR4AQ9NXH8 423 aa13.57□□□□□ -0.24
NDC80-202ENST00000574096 ATP6V0A2Q9Y487 856 aa13.57□□□□□ -0.24
NDC80-202ENST00000574096 IRS4O14654 1257 aaPredicted RBP13.56□□□□□ -0.24
NDC80-202ENST00000574096 AP1G2O75843 785 aa13.56□□□□□ -0.24
NDC80-202ENST00000574096 BBOX1O75936 387 aa13.56□□□□□ -0.24
NDC80-202ENST00000574096 DDNO94850 711 aaPredicted RBP13.56□□□□□ -0.24
NDC80-202ENST00000574096 DDX58O95786 925 aaKnown RBP13.56□□□□□ -0.24
NDC80-202ENST00000574096 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
NDC80-202ENST00000574096 CCDC191Q8NCU4 936 aa13.56□□□□□ -0.24
NDC80-202ENST00000574096 JARID2Q92833 1246 aaPredicted RBP13.56□□□□□ -0.24
NDC80-202ENST00000574096 STK31Q9BXU1 1019 aa13.56□□□□□ -0.24
NDC80-202ENST00000574096 CACNA1SQ13698 1873 aa13.56□□□□□ -0.24
NDC80-202ENST00000574096 ZNF541Q9H0D2 1346 aa13.56□□□□□ -0.24
NDC80-202ENST00000574096 COL4A5P29400 1685 aa13.56□□□□□ -0.24
NDC80-202ENST00000574096 TIAM2Q8IVF5 1701 aa13.56□□□□□ -0.24
NDC80-202ENST00000574096 USP17L8P0C7I0 530 aa13.55□□□□□ -0.24
NDC80-202ENST00000574096 VEGFAP15692 232 aaPredicted RBP13.55□□□□□ -0.24
NDC80-202ENST00000574096 HSPA6P17066 643 aa13.55□□□□□ -0.24
NDC80-202ENST00000574096 GRAPQ13588 217 aa13.55□□□□□ -0.24
NDC80-202ENST00000574096 DDX46Q7L014 1031 aaKnown RBP13.55□□□□□ -0.24
NDC80-202ENST00000574096 ZNF511Q8NB15 262 aa13.55□□□□□ -0.24
NDC80-202ENST00000574096 GRAPLQ8TC17 118 aaPredicted RBP13.55□□□□□ -0.24
NDC80-202ENST00000574096 MRGPRX2Q96LB1 330 aa13.55□□□□□ -0.24
NDC80-202ENST00000574096 CWC25Q9NXE8 425 aaPredicted RBP13.55□□□□□ -0.24
NDC80-202ENST00000574096 FZD9O00144 591 aa13.54□□□□□ -0.24
NDC80-202ENST00000574096 PCCAP05165 728 aaPredicted RBP13.54□□□□□ -0.24
NDC80-202ENST00000574096 FLIIQ13045 1269 aa13.54□□□□□ -0.24
NDC80-202ENST00000574096 LINC01559Q495D7 138 aa13.54□□□□□ -0.24
NDC80-202ENST00000574096 SP8Q8IXZ3 490 aa13.54□□□□□ -0.24
NDC80-202ENST00000574096 CELF1Q92879 486 aaKnown RBP13.54□□□□□ -0.24
NDC80-202ENST00000574096 MYH16Q9H6N6 1097 aa13.54□□□□□ -0.24
NDC80-202ENST00000574096 COL4A1P02462 1669 aa13.53□□□□□ -0.24
NDC80-202ENST00000574096 LCE2BO14633 110 aa13.53□□□□□ -0.24
NDC80-202ENST00000574096 CWF19L2Q2TBE0 894 aaKnown RBP13.53□□□□□ -0.24
NDC80-202ENST00000574096 TMEM259Q4ZIN3 620 aa13.53□□□□□ -0.24
NDC80-202ENST00000574096 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
NDC80-202ENST00000574096 RTFDC1Q9BY42 306 aaPredicted RBP13.53□□□□□ -0.24
NDC80-202ENST00000574096 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.25
NDC80-202ENST00000574096 CCER2I3L3R5 266 aa13.52□□□□□ -0.25
NDC80-202ENST00000574096 HMX1Q9NP08 348 aaPredicted RBP13.52□□□□□ -0.25
NDC80-202ENST00000574096 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.25
NDC80-202ENST00000574096 LAMB2P55268 1798 aa13.52□□□□□ -0.25
NDC80-202ENST00000574096 CCDC88AQ3V6T2 1871 aa13.52□□□□□ -0.25
NDC80-202ENST00000574096 CEP350Q5VT06 3117 aa13.52□□□□□ -0.25
NDC80-202ENST00000574096 WDR90Q96KV7 1748 aa13.51□□□□□ -0.25
NDC80-202ENST00000574096 SIAH2O43255 324 aa13.51□□□□□ -0.25
NDC80-202ENST00000574096 FSTL1Q12841 308 aa13.51□□□□□ -0.25
NDC80-202ENST00000574096 LARGE2Q8N3Y3 721 aa13.51□□□□□ -0.25
NDC80-202ENST00000574096 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
NDC80-202ENST00000574096 DICER1Q9UPY3 1922 aaKnown RBP13.51□□□□□ -0.25
NDC80-202ENST00000574096 CDHR2Q9BYE9 1310 aa13.5□□□□□ -0.25
NDC80-202ENST00000574096 PDE8AO60658 829 aa13.5□□□□□ -0.25
NDC80-202ENST00000574096 FKBP5Q13451 457 aaPredicted RBP13.5□□□□□ -0.25
NDC80-202ENST00000574096 AOC3Q16853 763 aa13.5□□□□□ -0.25
NDC80-202ENST00000574096 DPP8Q6V1X1 898 aaPredicted RBP13.5□□□□□ -0.25
NDC80-202ENST00000574096 TMC4Q7Z404 712 aa13.5□□□□□ -0.25
NDC80-202ENST00000574096 MPNDQ8N594 471 aa13.5□□□□□ -0.25
NDC80-202ENST00000574096 JDP2Q8WYK2 163 aa13.5□□□□□ -0.25
NDC80-202ENST00000574096 TMX4Q9H1E5 349 aaPredicted RBP13.5□□□□□ -0.25
NDC80-202ENST00000574096 F6X3S4 739 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms