RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 IREB2P48200 963 aaKnown RBP27.7■■■□□ 2.02
SNF8-216ENST00000573795 IQSEC3Q9UPP2 1182 aaPredicted RBP27.7■■■□□ 2.02
SNF8-216ENST00000573795 ANKRD13AQ8IZ07 590 aa27.69■■■□□ 2.02
SNF8-216ENST00000573795 KLHDC4Q8TBB5 520 aa27.69■■■□□ 2.02
SNF8-216ENST00000573795 SSH1Q8WYL5 1049 aa27.69■■■□□ 2.02
SNF8-216ENST00000573795 PTPRCP08575 1304 aa27.68■■■□□ 2.02
SNF8-216ENST00000573795 TNFAIP1Q13829 316 aa27.68■■■□□ 2.02
SNF8-216ENST00000573795 METTL24Q5JXM2 366 aa27.68■■■□□ 2.02
SNF8-216ENST00000573795 CENPFP49454 3210 aa27.68■■■□□ 2.02
SNF8-216ENST00000573795 PTPN18Q99952 460 aa27.67■■■□□ 2.02
SNF8-216ENST00000573795 USP44Q9H0E7 712 aa27.67■■■□□ 2.02
SNF8-216ENST00000573795 TESPA1A2RU30 521 aaPredicted RBP27.66■■■□□ 2.02
SNF8-216ENST00000573795 TCP10L2B9ZVM9 353 aa27.66■■■□□ 2.02
SNF8-216ENST00000573795 PDE8BO95263 885 aa27.66■■■□□ 2.02
SNF8-216ENST00000573795 CHAF1AQ13111 956 aaPredicted RBP27.66■■■□□ 2.02
SNF8-216ENST00000573795 TMEM39BQ9GZU3 492 aa27.66■■■□□ 2.02
SNF8-216ENST00000573795 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.65■■■□□ 2.02
SNF8-216ENST00000573795 ELP3Q9H9T3 547 aa27.65■■■□□ 2.02
SNF8-216ENST00000573795 E9PSI1 815 aa27.64■■■□□ 2.02
SNF8-216ENST00000573795 CRHR2Q13324 411 aa27.64■■■□□ 2.02
SNF8-216ENST00000573795 VPS37DQ86XT2 251 aa27.64■■■□□ 2.02
SNF8-216ENST00000573795 OPTNQ96CV9 577 aa27.64■■■□□ 2.02
SNF8-216ENST00000573795 MYH13Q9UKX3 1938 aa27.63■■■□□ 2.01
SNF8-216ENST00000573795 FGFR2P21802 821 aa27.63■■■□□ 2.01
SNF8-216ENST00000573795 BCAMP50895 628 aa27.63■■■□□ 2.01
SNF8-216ENST00000573795 HDLBPQ00341 1268 aaKnown RBP27.63■■■□□ 2.01
SNF8-216ENST00000573795 OTOP1Q7RTM1 612 aa27.63■■■□□ 2.01
SNF8-216ENST00000573795 CNKSR2Q8WXI2 1034 aa27.63■■■□□ 2.01
SNF8-216ENST00000573795 RFX5P48382 616 aaPredicted RBP27.62■■■□□ 2.01
SNF8-216ENST00000573795 SLFN5Q08AF3 891 aa27.62■■■□□ 2.01
SNF8-216ENST00000573795 CAVIN4Q5BKX8 364 aa27.62■■■□□ 2.01
SNF8-216ENST00000573795 TBC1D22AQ8WUA7 517 aa27.62■■■□□ 2.01
SNF8-216ENST00000573795 MS4A4AQ96JQ5 239 aa27.62■■■□□ 2.01
SNF8-216ENST00000573795 TRIM17Q9Y577 477 aa27.62■■■□□ 2.01
SNF8-216ENST00000573795 CACNB3P54284 484 aa27.61■■■□□ 2.01
SNF8-216ENST00000573795 CAP1Q01518 475 aa27.61■■■□□ 2.01
SNF8-216ENST00000573795 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.61■■■□□ 2.013e-6■■■■■ 38.3
SNF8-216ENST00000573795 KIF16BQ96L93 1317 aa27.61■■■□□ 2.01
SNF8-216ENST00000573795 BRCA2P51587 3418 aa27.6■■■□□ 2.01
SNF8-216ENST00000573795 MKI67P46013 3256 aaKnown RBP27.6■■■□□ 2.01
SNF8-216ENST00000573795 VGLL4Q14135 290 aa27.6■■■□□ 2.01
SNF8-216ENST00000573795 TNNI2P48788 182 aa27.59■■■□□ 2.01
SNF8-216ENST00000573795 CD99L2Q8TCZ2 262 aa27.59■■■□□ 2.01
SNF8-216ENST00000573795 TEKT1Q969V4 418 aa27.59■■■□□ 2.01
SNF8-216ENST00000573795 ZDHHC15Q96MV8 337 aa27.59■■■□□ 2.01
SNF8-216ENST00000573795 FRAT2O75474 233 aaPredicted RBP27.58■■■□□ 2.01
SNF8-216ENST00000573795 PUM3Q15397 648 aaKnown RBP27.58■■■□□ 2.01
SNF8-216ENST00000573795 OTUD7BQ6GQQ9 843 aa27.58■■■□□ 2.01
SNF8-216ENST00000573795 APOBEC3HQ6NTF7 200 aaKnown RBP27.58■■■□□ 2.01
SNF8-216ENST00000573795 BRI3BPQ8WY22 251 aa27.58■■■□□ 2.01
SNF8-216ENST00000573795 CDCA7LQ96GN5 454 aa27.58■■■□□ 2.01
SNF8-216ENST00000573795 MAP3K9P80192 1104 aa27.57■■■□□ 2
SNF8-216ENST00000573795 MRIQ9BWK5 157 aa27.57■■■□□ 2
SNF8-216ENST00000573795 RBBP6Q7Z6E9 1792 aaKnown RBP27.57■■■□□ 2
SNF8-216ENST00000573795 EYA2O00167 538 aa27.56■■■□□ 2
SNF8-216ENST00000573795 ALDH1L2Q3SY69 923 aa27.56■■■□□ 2
SNF8-216ENST00000573795 ATG9AQ7Z3C6 839 aa27.56■■■□□ 2
SNF8-216ENST00000573795 ERO1AQ96HE7 468 aa27.56■■■□□ 2
SNF8-216ENST00000573795 IFIT1P09914 478 aaKnown RBP27.55■■■□□ 2
SNF8-216ENST00000573795 PRPF38BQ5VTL8 546 aaKnown RBP27.55■■■□□ 2
SNF8-216ENST00000573795 PTPN22Q9Y2R2 807 aa27.55■■■□□ 2
SNF8-216ENST00000573795 SUGT1Q9Y2Z0 365 aa27.55■■■□□ 2
SNF8-216ENST00000573795 FAM83AQ86UY5 434 aa27.54■■■□□ 2
SNF8-216ENST00000573795 SNCAIPQ9Y6H5 919 aa27.54■■■□□ 2
SNF8-216ENST00000573795 RPAP1Q9BWH6 1393 aaPredicted RBP27.53■■■□□ 2
SNF8-216ENST00000573795 CCL15-CCL14A0A0B4J2E2 113 aa27.53■■■□□ 2
SNF8-216ENST00000573795 SP3Q02447 781 aa27.53■■■□□ 2
SNF8-216ENST00000573795 CCL15Q16663 113 aa27.53■■■□□ 2
SNF8-216ENST00000573795 FKBP1CQ5VVH2 108 aa27.53■■■□□ 2
SNF8-216ENST00000573795 TRMT2AQ8IZ69 625 aaKnown RBP27.53■■■□□ 2
SNF8-216ENST00000573795 OTUD5Q96G74 571 aa27.53■■■□□ 2
SNF8-216ENST00000573795 CSADQ9Y600 493 aa27.53■■■□□ 2
SNF8-216ENST00000573795 MAST3O60307 1309 aa27.52■■■□□ 2
SNF8-216ENST00000573795 SPDYE5A6NIY4 337 aa27.52■■■□□ 2
SNF8-216ENST00000573795 HHIPL2Q6UWX4 724 aa27.52■■■□□ 2
SNF8-216ENST00000573795 FAM43AQ8N2R8 423 aa27.52■■■□□ 2
SNF8-216ENST00000573795 LPIN2Q92539 896 aa27.52■■■□□ 2
SNF8-216ENST00000573795 SMC4Q9NTJ3 1288 aa27.52■■■□□ 2
SNF8-216ENST00000573795 POTEFA5A3E0 1075 aa27.51■■□□□ 1.99
SNF8-216ENST00000573795 SLC5A1P13866 664 aa27.51■■□□□ 1.99
SNF8-216ENST00000573795 GTF2A2P52657 109 aa27.51■■□□□ 1.99
SNF8-216ENST00000573795 EFCC1Q9HA90 598 aa27.51■■□□□ 1.99
SNF8-216ENST00000573795 ZSWIM8A7E2V4 1837 aa27.51■■□□□ 1.99
SNF8-216ENST00000573795 ZKSCAN4Q969J2 545 aaPredicted RBP27.5■■□□□ 1.99
SNF8-216ENST00000573795 TMOD2Q9NZR1 351 aa27.5■■□□□ 1.99
SNF8-216ENST00000573795 TAF1CQ15572 869 aaPredicted RBP27.49■■□□□ 1.99
SNF8-216ENST00000573795 WRNIP1Q96S55 665 aa27.49■■□□□ 1.99
SNF8-216ENST00000573795 KIAA0100Q14667 2235 aaKnown RBP27.49■■□□□ 1.99
SNF8-216ENST00000573795 INTS3Q68E01 1043 aaKnown RBP27.48■■□□□ 1.99
SNF8-216ENST00000573795 WDR66Q8TBY9 1149 aa27.48■■□□□ 1.99
SNF8-216ENST00000573795 ARMC5Q96C12 935 aa27.48■■□□□ 1.99
SNF8-216ENST00000573795 ERO1BQ86YB8 467 aa27.47■■□□□ 1.99
SNF8-216ENST00000573795 SIL1Q9H173 461 aa27.47■■□□□ 1.99
SNF8-216ENST00000573795 ZFYVE28Q9HCC9 887 aa27.47■■□□□ 1.99
SNF8-216ENST00000573795 DAGLAQ9Y4D2 1042 aa27.47■■□□□ 1.99
SNF8-216ENST00000573795 CIAO1O76071 339 aa27.46■■□□□ 1.99
SNF8-216ENST00000573795 UBTFL1P0CB47 393 aaPredicted RBP27.46■■□□□ 1.99
SNF8-216ENST00000573795 PRDX5P30044 214 aa27.46■■□□□ 1.99
SNF8-216ENST00000573795 DIXDC1Q155Q3 683 aa27.46■■□□□ 1.99
SNF8-216ENST00000573795 FBXO3Q9UK99 471 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms