RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 TM4SF1P30408 202 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 APOBRQ0VD83 1088 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 TRDNQ13061 729 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 GDPD2Q9HCC8 539 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 SLC15A2Q16348 729 aa16.47■□□□□ 0.23
TVP23A-207ENST00000573360 STOX1Q6ZVD7 989 aa16.47■□□□□ 0.23
TVP23A-207ENST00000573360 ANKRD2Q9GZV1 360 aa16.47■□□□□ 0.23
TVP23A-207ENST00000573360 GGA1Q9UJY5 639 aa16.47■□□□□ 0.23
TVP23A-207ENST00000573360 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.47■□□□□ 0.23
TVP23A-207ENST00000573360 ZFYP08048 801 aaPredicted RBP16.47■□□□□ 0.23
TVP23A-207ENST00000573360 C2CD5Q86YS7 1000 aa16.47■□□□□ 0.23
TVP23A-207ENST00000573360 NCOA5Q9HCD5 579 aaKnown RBP16.47■□□□□ 0.23
TVP23A-207ENST00000573360 PSDA5PKW4 1024 aaPredicted RBP16.47■□□□□ 0.23
TVP23A-207ENST00000573360 NUP188Q5SRE5 1749 aa16.47■□□□□ 0.23
TVP23A-207ENST00000573360 PTMAP06454 111 aaKnown RBP16.46■□□□□ 0.23
TVP23A-207ENST00000573360 MXD3Q9BW11 206 aa16.46■□□□□ 0.23
TVP23A-207ENST00000573360 TPCN1Q9ULQ1 816 aa16.46■□□□□ 0.23
TVP23A-207ENST00000573360 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.23
TVP23A-207ENST00000573360 B4E1Z4 1266 aa16.46■□□□□ 0.22
TVP23A-207ENST00000573360 ME3Q16798 604 aa16.46■□□□□ 0.22
TVP23A-207ENST00000573360 ADGRA1Q86SQ6 560 aa16.46■□□□□ 0.22
TVP23A-207ENST00000573360 E7EWF7 191 aa16.45■□□□□ 0.22
TVP23A-207ENST00000573360 GTF2IP78347 998 aa16.45■□□□□ 0.22
TVP23A-207ENST00000573360 NFXL1Q6ZNB6 911 aa16.45■□□□□ 0.22
TVP23A-207ENST00000573360 MPNDQ8N594 471 aa16.45■□□□□ 0.22
TVP23A-207ENST00000573360 DBNDD1Q9H9R9 158 aa16.45■□□□□ 0.22
TVP23A-207ENST00000573360 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
TVP23A-207ENST00000573360 SYCE3A1L190 88 aa16.45■□□□□ 0.22
TVP23A-207ENST00000573360 ARID4AP29374 1257 aaPredicted RBP16.45■□□□□ 0.22
TVP23A-207ENST00000573360 ZSCAN23Q3MJ62 389 aa16.45■□□□□ 0.22
TVP23A-207ENST00000573360 ZC3H12CQ9C0D7 883 aaKnown RBP16.45■□□□□ 0.22
TVP23A-207ENST00000573360 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
TVP23A-207ENST00000573360 MED23Q9ULK4 1368 aa16.45■□□□□ 0.22
TVP23A-207ENST00000573360 PPEF1O14829 653 aaPredicted RBP16.44■□□□□ 0.22
TVP23A-207ENST00000573360 GUCY1B3Q02153 619 aa16.44■□□□□ 0.22
TVP23A-207ENST00000573360 CCDC173Q0VFZ6 552 aa16.44■□□□□ 0.22
TVP23A-207ENST00000573360 PLCB2Q00722 1185 aa16.44■□□□□ 0.22
TVP23A-207ENST00000573360 MAGEB6P1A0A0J9YX57 407 aa16.44■□□□□ 0.22
TVP23A-207ENST00000573360 DPP8Q6V1X1 898 aaPredicted RBP16.44■□□□□ 0.22
TVP23A-207ENST00000573360 MYL10Q9BUA6 226 aa16.44■□□□□ 0.22
TVP23A-207ENST00000573360 RPS6KB1P23443 525 aa16.43■□□□□ 0.22
TVP23A-207ENST00000573360 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
TVP23A-207ENST00000573360 THSD7AQ9UPZ6 1657 aa16.43■□□□□ 0.22
TVP23A-207ENST00000573360 H0YIN7 160 aa16.43■□□□□ 0.22
TVP23A-207ENST00000573360 GRIK5Q16478 980 aa16.43■□□□□ 0.22
TVP23A-207ENST00000573360 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
TVP23A-207ENST00000573360 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
TVP23A-207ENST00000573360 XDHP47989 1333 aa16.43■□□□□ 0.22
TVP23A-207ENST00000573360 RBM5P52756 815 aaKnown RBP eCLIP16.43■□□□□ 0.22
TVP23A-207ENST00000573360 HSP90AA2PQ14568 343 aaPredicted RBP16.43■□□□□ 0.22
TVP23A-207ENST00000573360 POLLQ9UGP5 575 aa16.43■□□□□ 0.22
TVP23A-207ENST00000573360 PIBF1Q8WXW3 757 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 LMBRD1Q9NUN5 540 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 GJB2P29033 226 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 MCM2P49736 904 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 SCNN1DP51172 638 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 MECOMQ03112 1051 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 ZNF804AQ7Z570 1209 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
TVP23A-207ENST00000573360 JAK2O60674 1132 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 KRT32Q14532 448 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 SAP30BPQ9UHR5 308 aaKnown RBP16.42■□□□□ 0.22
TVP23A-207ENST00000573360 COL4A1P02462 1669 aa16.42■□□□□ 0.22
TVP23A-207ENST00000573360 C21orf2O43822 256 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 LDHBP07195 334 aaKnown RBP16.41■□□□□ 0.22
TVP23A-207ENST00000573360 EVX2Q03828 476 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 MFSD14BQ5SR56 506 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 FAM173BQ6P4H8 233 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 STRBPQ96SI9 672 aaKnown RBP16.41■□□□□ 0.22
TVP23A-207ENST00000573360 USP5P45974 858 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 R3HDM1Q15032 1099 aaKnown RBP16.41■□□□□ 0.22
TVP23A-207ENST00000573360 MICU3Q86XE3 530 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.41■□□□□ 0.22
TVP23A-207ENST00000573360 PRC1O43663 620 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 IFNL3Q8IZI9 196 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 ARID3AQ99856 593 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 RBSNQ9H1K0 784 aa16.41■□□□□ 0.22
TVP23A-207ENST00000573360 PICALMQ13492 652 aa16.4■□□□□ 0.22
TVP23A-207ENST00000573360 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
TVP23A-207ENST00000573360 BRIP1Q9BX63 1249 aa16.4■□□□□ 0.22
TVP23A-207ENST00000573360 CEBPZQ03701 1054 aaKnown RBP16.4■□□□□ 0.22
TVP23A-207ENST00000573360 UBE3CQ15386 1083 aa16.4■□□□□ 0.22
TVP23A-207ENST00000573360 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.4■□□□□ 0.22
TVP23A-207ENST00000573360 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
TVP23A-207ENST00000573360 C4BP0C0L5 1744 aa16.4■□□□□ 0.22
TVP23A-207ENST00000573360 TBC1D10CQ8IV04 446 aa16.4■□□□□ 0.22
TVP23A-207ENST00000573360 FLAD1Q8NFF5 587 aa16.4■□□□□ 0.22
TVP23A-207ENST00000573360 CAMKK2Q96RR4 588 aa16.4■□□□□ 0.22
TVP23A-207ENST00000573360 NOL10Q9BSC4 688 aaKnown RBP16.4■□□□□ 0.22
TVP23A-207ENST00000573360 AK9Q5TCS8 1911 aa16.39■□□□□ 0.21
TVP23A-207ENST00000573360 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.21
TVP23A-207ENST00000573360 PDE6BP35913 854 aa16.39■□□□□ 0.21
TVP23A-207ENST00000573360 DHX32Q7L7V1 743 aaKnown RBP16.39■□□□□ 0.21
TVP23A-207ENST00000573360 TBC1D16Q8TBP0 767 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms