RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 ABI1Q8IZP0 508 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 NAP1L4Q99733 375 aaKnown RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 SNAPC4Q5SXM2 1469 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 CABLES1Q8TDN4 633 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 ZNF830Q96NB3 372 aaPredicted RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 MED10Q9BTT4 135 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 BTG4Q9NY30 223 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 FAM184BQ9ULE4 1060 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 ABT1Q9ULW3 272 aaKnown RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 CFAP65Q6ZU64 1925 aaKnown RBP10.63□□□□□ -0.71
USP6-204ENST00000572949 MARCKSP29966 332 aaPredicted RBP10.63□□□□□ -0.71
USP6-204ENST00000572949 PABPC4Q13310 644 aaKnown RBP eCLIP10.63□□□□□ -0.71
USP6-204ENST00000572949 USP48Q86UV5 1035 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 ANKS4BQ8N8V4 417 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 POLR3GO15318 223 aaPredicted RBP10.63□□□□□ -0.71
USP6-204ENST00000572949 OPA1O60313 960 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 ERCC6LQ2NKX8 1250 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 EXOC7Q9UPT5 735 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 SBNO2Q9Y2G9 1366 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 ADGRL1O94910 1474 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 FNBP4Q8N3X1 1017 aaPredicted RBP10.63□□□□□ -0.71
USP6-204ENST00000572949 PDCL2Q8N4E4 241 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 RTEL1Q9NZ71 1219 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 STIM2Q9P246 746 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 SLC39A6Q13433 755 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 LRRC9Q6ZRR7 1453 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 RAPGEF1Q13905 1077 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 MTUS1Q9ULD2 1270 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 CFTRP13569 1480 aa10.63□□□□□ -0.71
USP6-204ENST00000572949 DDX39AO00148 427 aaKnown RBP10.63□□□□□ -0.71
USP6-204ENST00000572949 LEO1Q8WVC0 666 aaPredicted RBP10.63□□□□□ -0.71
USP6-204ENST00000572949 ZSCAN16Q9H4T2 348 aaPredicted RBP10.63□□□□□ -0.71
USP6-204ENST00000572949 HSPA1LP34931 641 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 CHPF2Q9P2E5 772 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 UBASH3AP57075 661 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 ALDH1B1P30837 517 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 IL15P40933 162 aaPredicted RBP10.62□□□□□ -0.71
USP6-204ENST00000572949 PARD3BQ8TEW8 1205 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 TACC1O75410 805 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 CLUL1Q15846 466 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 HELBQ8NG08 1087 aaPredicted RBP10.62□□□□□ -0.71
USP6-204ENST00000572949 AS3MTQ9HBK9 375 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 USP25Q9UHP3 1055 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 CASKIN1Q8WXD9 1431 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 EHBP1L1Q8N3D4 1523 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 PPIP5K2O43314 1243 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 ANXA1P04083 346 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 P4HA1P13674 534 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 SEL1L2Q5TEA6 688 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 MAEAQ7L5Y9 396 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 GLG1Q92896 1179 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 USP21Q9UK80 565 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 ACEP12821 1306 aa10.62□□□□□ -0.71
USP6-204ENST00000572949 ARHGEF35A5YM69 484 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 NEMFO60524 1076 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 MYCP01106 439 aaPredicted RBP10.61□□□□□ -0.71
USP6-204ENST00000572949 DLGAP5Q15398 846 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 LIN9Q5TKA1 542 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 SELENOSQ9BQE4 189 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 XPAP23025 273 aaPredicted RBP10.61□□□□□ -0.71
USP6-204ENST00000572949 TCP10Q12799 353 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 MCMDC2Q4G0Z9 681 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 RAB3IPQ96QF0 476 aaPredicted RBP10.61□□□□□ -0.71
USP6-204ENST00000572949 DENND2AQ9ULE3 1009 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 TRIM75PA6NK02 468 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 SMIM23A6NLE4 172 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 HMGB1P1B2RPK0 211 aaPredicted RBP10.61□□□□□ -0.71
USP6-204ENST00000572949 TNFAIP1Q13829 316 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 ZSWIM4Q9H7M6 989 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 PPME1Q9Y570 386 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 ABCC11Q96J66 1382 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 TYW5A2RUC4 315 aaKnown RBP10.61□□□□□ -0.71
USP6-204ENST00000572949 ELMSAN1Q6PJG2 1045 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 SKA2Q8WVK7 121 aaPredicted RBP10.61□□□□□ -0.71
USP6-204ENST00000572949 IGF1RP08069 1367 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 HSPA4P34932 840 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 HSP90AA4PQ58FG1 418 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 LMCD1Q9NZU5 365 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 SPAG1Q07617 926 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 LMBR1LQ6UX01 489 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 GPR161Q8N6U8 529 aaKnown RBP10.61□□□□□ -0.71
USP6-204ENST00000572949 DHX58Q96C10 678 aa10.61□□□□□ -0.71
USP6-204ENST00000572949 GRM8O00222 908 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 KIF11P52732 1056 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 DIXDC1Q155Q3 683 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 CASC4Q6P4E1 433 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 KCNG4Q8TDN1 519 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 KCNK9Q9NPC2 374 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 KIF14Q15058 1648 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 SNW1Q13573 536 aaKnown RBP10.6□□□□□ -0.71
USP6-204ENST00000572949 FAM98CQ17RN3 349 aaKnown RBP10.6□□□□□ -0.71
USP6-204ENST00000572949 MTRF1LQ9UGC7 380 aaKnown RBP10.6□□□□□ -0.71
USP6-204ENST00000572949 LRFN2Q9ULH4 789 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 GNG11P61952 73 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 IFRD2Q12894 506 aaPredicted RBP10.6□□□□□ -0.71
USP6-204ENST00000572949 SKIV2LQ15477 1246 aaKnown RBP10.6□□□□□ -0.71
USP6-204ENST00000572949 NSMFQ6X4W1 530 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 GOLGA6CA6NDK9 693 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 GOLGA6BA6NDN3 693 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms