RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 MAP2K2P36507 400 aa24.89■■□□□ 1.58
NUP88-204ENST00000572290 TEKT1Q969V4 418 aa24.89■■□□□ 1.58
NUP88-204ENST00000572290 AIDAQ96BJ3 306 aa24.89■■□□□ 1.58
NUP88-204ENST00000572290 COG6Q9Y2V7 657 aa24.89■■□□□ 1.58
NUP88-204ENST00000572290 PPP2R3BQ9Y5P8 575 aa24.89■■□□□ 1.58
NUP88-204ENST00000572290 COL1A1P02452 1464 aaPredicted RBP24.89■■□□□ 1.57
NUP88-204ENST00000572290 SURF6O75683 361 aaKnown RBP24.88■■□□□ 1.57
NUP88-204ENST00000572290 OS9Q13438 667 aaPredicted RBP24.88■■□□□ 1.57
NUP88-204ENST00000572290 SPDYE2Q495Y8 402 aa24.88■■□□□ 1.57
NUP88-204ENST00000572290 CEP85Q6P2H3 762 aa24.88■■□□□ 1.57
NUP88-204ENST00000572290 MRIQ9BWK5 157 aa24.88■■□□□ 1.57
NUP88-204ENST00000572290 TDRD3Q9H7E2 651 aaKnown RBP24.88■■□□□ 1.57
NUP88-204ENST00000572290 ZNF70Q9UC06 446 aaPredicted RBP24.88■■□□□ 1.57
NUP88-204ENST00000572290 DDX19BQ9UMR2 479 aa24.88■■□□□ 1.57
NUP88-204ENST00000572290 ZNF157P51786 506 aaPredicted RBP24.87■■□□□ 1.57
NUP88-204ENST00000572290 TTLL12Q14166 644 aaPredicted RBP24.87■■□□□ 1.57
NUP88-204ENST00000572290 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.87■■□□□ 1.57
NUP88-204ENST00000572290 CCDC102AQ96A19 550 aa24.87■■□□□ 1.57
NUP88-204ENST00000572290 NOGQ13253 232 aa24.86■■□□□ 1.57
NUP88-204ENST00000572290 MOB2Q70IA6 237 aa24.86■■□□□ 1.57
NUP88-204ENST00000572290 NOP58Q9Y2X3 529 aaKnown RBP24.86■■□□□ 1.57
NUP88-204ENST00000572290 UBE2Q2LH0YL09 131 aa24.85■■□□□ 1.57
NUP88-204ENST00000572290 FOXN1O15353 648 aa24.85■■□□□ 1.57
NUP88-204ENST00000572290 TNFAIP1Q13829 316 aa24.85■■□□□ 1.57
NUP88-204ENST00000572290 GORABQ5T7V8 394 aa24.85■■□□□ 1.57
NUP88-204ENST00000572290 ZDHHC15Q96MV8 337 aa24.85■■□□□ 1.57
NUP88-204ENST00000572290 SALL1Q9NSC2 1324 aa24.85■■□□□ 1.57
NUP88-204ENST00000572290 RASGRF1Q13972 1273 aa24.84■■□□□ 1.57
NUP88-204ENST00000572290 RASA3Q14644 834 aa24.84■■□□□ 1.57
NUP88-204ENST00000572290 HHIPL2Q6UWX4 724 aa24.84■■□□□ 1.57
NUP88-204ENST00000572290 CHMP4BQ9H444 224 aaKnown RBP24.84■■□□□ 1.57
NUP88-204ENST00000572290 GPR108Q9NPR9 543 aa24.84■■□□□ 1.57
NUP88-204ENST00000572290 FAM155AB1AL88 458 aaPredicted RBP24.83■■□□□ 1.57
NUP88-204ENST00000572290 LDHBP07195 334 aaKnown RBP24.83■■□□□ 1.57
NUP88-204ENST00000572290 PRDX5P30044 214 aa24.83■■□□□ 1.57
NUP88-204ENST00000572290 PRKG1Q13976 671 aa24.83■■□□□ 1.57
NUP88-204ENST00000572290 PDE3AQ14432 1141 aa24.83■■□□□ 1.57
NUP88-204ENST00000572290 ARMC9Q7Z3E5 817 aa24.83■■□□□ 1.57
NUP88-204ENST00000572290 ZGPATQ8N5A5 531 aaKnown RBP24.83■■□□□ 1.57
NUP88-204ENST00000572290 BEGAINQ9BUH8 593 aa24.83■■□□□ 1.57
NUP88-204ENST00000572290 PCNTO95613 3336 aa24.83■■□□□ 1.57
NUP88-204ENST00000572290 PDS5AQ29RF7 1337 aaKnown RBP24.83■■□□□ 1.56
NUP88-204ENST00000572290 SLC10A3P09131 477 aa24.82■■□□□ 1.56
NUP88-204ENST00000572290 SUPT20HL1Q3ZLR7 823 aa24.82■■□□□ 1.56
NUP88-204ENST00000572290 TNNI3KQ59H18 835 aa24.82■■□□□ 1.56
NUP88-204ENST00000572290 APOBEC3HQ6NTF7 200 aaKnown RBP24.82■■□□□ 1.56
NUP88-204ENST00000572290 ARAP2Q8WZ64 1704 aa24.82■■□□□ 1.56
NUP88-204ENST00000572290 ZBTB40Q9NUA8 1239 aa24.82■■□□□ 1.56
NUP88-204ENST00000572290 FPGT-TNNI3KV9GXZ4 949 aa24.82■■□□□ 1.56
NUP88-204ENST00000572290 PAPPA2Q9BXP8 1791 aa24.82■■□□□ 1.56
NUP88-204ENST00000572290 THSD7BQ9C0I4 1608 aa24.82■■□□□ 1.56
NUP88-204ENST00000572290 POLR2AP24928 1970 aaKnown RBP24.82■■□□□ 1.56
NUP88-204ENST00000572290 TCP10L2B9ZVM9 353 aa24.81■■□□□ 1.56
NUP88-204ENST00000572290 TNNI2P48788 182 aa24.81■■□□□ 1.56
NUP88-204ENST00000572290 CTCFP49711 727 aaPredicted RBP24.81■■□□□ 1.56
NUP88-204ENST00000572290 C20orf194Q5TEA3 1177 aa24.81■■□□□ 1.56
NUP88-204ENST00000572290 YTHDC1Q96MU7 727 aaKnown RBP24.81■■□□□ 1.56
NUP88-204ENST00000572290 ZIC5Q96T25 663 aa24.81■■□□□ 1.56
NUP88-204ENST00000572290 NBPF12Q5TAG4 269 aaPredicted RBP24.8■■□□□ 1.56
NUP88-204ENST00000572290 RASAL3Q86YV0 1011 aa24.8■■□□□ 1.56
NUP88-204ENST00000572290 RPAP2Q8IXW5 612 aaPredicted RBP24.8■■□□□ 1.56
NUP88-204ENST00000572290 TMOD2Q9NZR1 351 aa24.8■■□□□ 1.56
NUP88-204ENST00000572290 ANGEL1Q9UNK9 670 aaKnown RBP24.8■■□□□ 1.56
NUP88-204ENST00000572290 PPP1R12BO60237 982 aaPredicted RBP24.79■■□□□ 1.56
NUP88-204ENST00000572290 DIXDC1Q155Q3 683 aa24.79■■□□□ 1.56
NUP88-204ENST00000572290 HMG20BQ9P0W2 317 aa24.79■■□□□ 1.56
NUP88-204ENST00000572290 ABCF2Q9UG63 623 aa24.79■■□□□ 1.56
NUP88-204ENST00000572290 UQCRFS1P1P0C7P4 283 aa24.78■■□□□ 1.56
NUP88-204ENST00000572290 ARID4AP29374 1257 aaPredicted RBP24.78■■□□□ 1.56
NUP88-204ENST00000572290 KIF23Q02241 960 aaPredicted RBP24.78■■□□□ 1.56
NUP88-204ENST00000572290 COL13A1Q5TAT6 717 aaPredicted RBP24.78■■□□□ 1.56
NUP88-204ENST00000572290 SPTY2D1Q68D10 685 aaPredicted RBP24.78■■□□□ 1.56
NUP88-204ENST00000572290 DAGLAQ9Y4D2 1042 aa24.78■■□□□ 1.56
NUP88-204ENST00000572290 CACNB3P54284 484 aa24.77■■□□□ 1.56
NUP88-204ENST00000572290 LDLRAD1Q5T700 205 aa24.77■■□□□ 1.56
NUP88-204ENST00000572290 ERC1Q8IUD2 1116 aa24.77■■□□□ 1.56
NUP88-204ENST00000572290 SPATA5Q8NB90 893 aa24.77■■□□□ 1.56
NUP88-204ENST00000572290 DBNDD2Q9BQY9 259 aa24.77■■□□□ 1.56
NUP88-204ENST00000572290 FZD1Q9UP38 647 aa24.77■■□□□ 1.56
NUP88-204ENST00000572290 EXOC6BQ9Y2D4 811 aa24.77■■□□□ 1.56
NUP88-204ENST00000572290 SSC5DA1L4H1 1573 aa24.76■■□□□ 1.55
NUP88-204ENST00000572290 HMMRO75330 724 aa24.76■■□□□ 1.55
NUP88-204ENST00000572290 HSPA8P11142 646 aaKnown RBP24.76■■□□□ 1.55
NUP88-204ENST00000572290 MAP3K11Q16584 847 aa24.76■■□□□ 1.55
NUP88-204ENST00000572290 HSP90AB4PQ58FF6 505 aa24.76■■□□□ 1.55
NUP88-204ENST00000572290 CCDC158Q5M9N0 1113 aa24.76■■□□□ 1.55
NUP88-204ENST00000572290 DZIP1Q86YF9 867 aaKnown RBP24.76■■□□□ 1.55
NUP88-204ENST00000572290 TEPSINQ96N21 525 aa24.76■■□□□ 1.55
NUP88-204ENST00000572290 TMEM39BQ9GZU3 492 aa24.76■■□□□ 1.55
NUP88-204ENST00000572290 TTC39AQ5SRH9 613 aa24.75■■□□□ 1.55
NUP88-204ENST00000572290 FKBP1CQ5VVH2 108 aa24.75■■□□□ 1.55
NUP88-204ENST00000572290 PI16Q6UXB8 463 aa24.75■■□□□ 1.55
NUP88-204ENST00000572290 PRDM10Q9NQV6 1147 aa24.75■■□□□ 1.55
NUP88-204ENST00000572290 CA12O43570 354 aa24.74■■□□□ 1.55
NUP88-204ENST00000572290 MCAMP43121 646 aa24.74■■□□□ 1.55
NUP88-204ENST00000572290 LBX1P52954 281 aa24.74■■□□□ 1.55
NUP88-204ENST00000572290 ERICH6Q7L0X2 663 aa24.74■■□□□ 1.55
NUP88-204ENST00000572290 FAM83AQ86UY5 434 aa24.74■■□□□ 1.55
NUP88-204ENST00000572290 CDAN1Q8IWY9 1227 aa24.74■■□□□ 1.55
NUP88-204ENST00000572290 SLF2Q8IX21 1173 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms