RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 H7C1D1 291 aa10.81□□□□□ -0.68
SMG6-210ENST00000572205 ATP8B2P98198 1209 aa10.81□□□□□ -0.68
SMG6-210ENST00000572205 TFCP2Q12800 502 aa10.81□□□□□ -0.68
SMG6-210ENST00000572205 ANGEL2Q5VTE6 544 aaKnown RBP10.81□□□□□ -0.68
SMG6-210ENST00000572205 ZNF384Q8TF68 577 aa10.81□□□□□ -0.68
SMG6-210ENST00000572205 RYDENQ9NUL5 291 aaKnown RBP10.81□□□□□ -0.68
SMG6-210ENST00000572205 SCAF8Q9UPN6 1271 aaKnown RBP10.81□□□□□ -0.68
SMG6-210ENST00000572205 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
SMG6-210ENST00000572205 PHIPQ8WWQ0 1821 aa10.81□□□□□ -0.68
SMG6-210ENST00000572205 PDS5AQ29RF7 1337 aaKnown RBP10.81□□□□□ -0.68
SMG6-210ENST00000572205 TMEM88BA6NKF7 163 aa10.8□□□□□ -0.68
SMG6-210ENST00000572205 PYGBP11216 843 aa10.8□□□□□ -0.68
SMG6-210ENST00000572205 SCARF1Q14162 830 aa10.8□□□□□ -0.68
SMG6-210ENST00000572205 MFSD14BQ5SR56 506 aa10.8□□□□□ -0.68
SMG6-210ENST00000572205 CLEC11AQ9Y240 323 aa10.8□□□□□ -0.68
SMG6-210ENST00000572205 TLL2Q9Y6L7 1015 aa10.8□□□□□ -0.68
SMG6-210ENST00000572205 SALL1Q9NSC2 1324 aa10.8□□□□□ -0.68
SMG6-210ENST00000572205 PTPRFP10586 1907 aa10.8□□□□□ -0.68
SMG6-210ENST00000572205 A0A1B0GUL7 405 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 SLC5A1P13866 664 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 RASGRF1Q13972 1273 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 PDE3AQ14432 1141 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 RBM26Q5T8P6 1007 aaKnown RBP10.79□□□□□ -0.68
SMG6-210ENST00000572205 CCDC102BQ68D86 513 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 CDC37L1Q7L3B6 337 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 KRT26Q7Z3Y9 468 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 SAPCD2Q86UD0 394 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 USP48Q86UV5 1035 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
SMG6-210ENST00000572205 CDCA5Q96FF9 252 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 TLR7Q9NYK1 1049 aaKnown RBP10.79□□□□□ -0.68
SMG6-210ENST00000572205 HDAC5Q9UQL6 1122 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 ATAD5Q96QE3 1844 aa10.79□□□□□ -0.68
SMG6-210ENST00000572205 G3V3G9 751 aa10.78□□□□□ -0.68
SMG6-210ENST00000572205 IFIT1P09914 478 aaKnown RBP10.78□□□□□ -0.68
SMG6-210ENST00000572205 ARID4AP29374 1257 aaPredicted RBP10.78□□□□□ -0.68
SMG6-210ENST00000572205 PRDX5P30044 214 aa10.78□□□□□ -0.68
SMG6-210ENST00000572205 MMP14P50281 582 aa10.78□□□□□ -0.68
SMG6-210ENST00000572205 TIMM10P62072 90 aa10.78□□□□□ -0.68
SMG6-210ENST00000572205 PI16Q6UXB8 463 aa10.78□□□□□ -0.68
SMG6-210ENST00000572205 ERICH6Q7L0X2 663 aa10.78□□□□□ -0.68
SMG6-210ENST00000572205 FBXW7Q969H0 707 aa10.78□□□□□ -0.68
SMG6-210ENST00000572205 XAGE2Q96GT9 111 aa10.78□□□□□ -0.68
SMG6-210ENST00000572205 PRMT6Q96LA8 375 aaPredicted RBP10.78□□□□□ -0.68
SMG6-210ENST00000572205 CEP126Q9P2H0 1117 aa10.78□□□□□ -0.68
SMG6-210ENST00000572205 MKRN1Q9UHC7 482 aaKnown RBP10.78□□□□□ -0.68
SMG6-210ENST00000572205 ATRNL1Q5VV63 1379 aa10.77□□□□□ -0.68
SMG6-210ENST00000572205 DOCK1Q14185 1865 aa10.77□□□□□ -0.69
SMG6-210ENST00000572205 NAV1Q8NEY1 1877 aa10.77□□□□□ -0.69
SMG6-210ENST00000572205 FAM155AB1AL88 458 aaPredicted RBP10.77□□□□□ -0.69
SMG6-210ENST00000572205 F8W031 263 aaPredicted RBP10.77□□□□□ -0.69
SMG6-210ENST00000572205 CELF2O95319 508 aaKnown RBP10.77□□□□□ -0.69
SMG6-210ENST00000572205 VEGFBP49765 207 aa10.77□□□□□ -0.69
SMG6-210ENST00000572205 RRP1P56182 461 aaKnown RBP10.77□□□□□ -0.69
SMG6-210ENST00000572205 CFAP100Q494V2 611 aa10.77□□□□□ -0.69
SMG6-210ENST00000572205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMG6-210ENST00000572205 TEPSINQ96N21 525 aa10.77□□□□□ -0.69
SMG6-210ENST00000572205 GPR108Q9NPR9 543 aa10.77□□□□□ -0.69
SMG6-210ENST00000572205 DBNLQ9UJU6 430 aaKnown RBP10.77□□□□□ -0.69
SMG6-210ENST00000572205 SERPINA10Q9UK55 444 aa10.77□□□□□ -0.69
SMG6-210ENST00000572205 DDX19BQ9UMR2 479 aa10.77□□□□□ -0.69
SMG6-210ENST00000572205 RPAP1Q9BWH6 1393 aaPredicted RBP10.77□□□□□ -0.69
SMG6-210ENST00000572205 MCAMP43121 646 aa10.76□□□□□ -0.69
SMG6-210ENST00000572205 CRKP46108 304 aa10.76□□□□□ -0.69
SMG6-210ENST00000572205 CHAF1AQ13111 956 aaPredicted RBP10.76□□□□□ -0.69
SMG6-210ENST00000572205 TNNI3KQ59H18 835 aa10.76□□□□□ -0.69
SMG6-210ENST00000572205 CAVIN4Q5BKX8 364 aa10.76□□□□□ -0.69
SMG6-210ENST00000572205 APOBEC3HQ6NTF7 200 aaKnown RBP10.76□□□□□ -0.69
SMG6-210ENST00000572205 EAF2Q96CJ1 260 aaPredicted RBP10.76□□□□□ -0.69
SMG6-210ENST00000572205 HHIPL1Q96JK4 782 aa10.76□□□□□ -0.69
SMG6-210ENST00000572205 DBNDD2Q9BQY9 259 aa10.76□□□□□ -0.69
SMG6-210ENST00000572205 TTF2Q9UNY4 1162 aaKnown RBP10.76□□□□□ -0.69
SMG6-210ENST00000572205 EXOC6BQ9Y2D4 811 aa10.76□□□□□ -0.69
SMG6-210ENST00000572205 FPGT-TNNI3KV9GXZ4 949 aa10.76□□□□□ -0.69
SMG6-210ENST00000572205 GAKO14976 1311 aa10.76□□□□□ -0.69
SMG6-210ENST00000572205 SEMA3EO15041 775 aa10.75□□□□□ -0.69
SMG6-210ENST00000572205 HDLBPQ00341 1268 aaKnown RBP10.75□□□□□ -0.69
SMG6-210ENST00000572205 PRAMEF18Q5VWM3 479 aa10.75□□□□□ -0.69
SMG6-210ENST00000572205 TBC1D22AQ8WUA7 517 aa10.75□□□□□ -0.69
SMG6-210ENST00000572205 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
SMG6-210ENST00000572205 ZDHHC15Q96MV8 337 aa10.75□□□□□ -0.69
SMG6-210ENST00000572205 ZIC5Q96T25 663 aa10.75□□□□□ -0.69
SMG6-210ENST00000572205 HMG20BQ9P0W2 317 aa10.75□□□□□ -0.69
SMG6-210ENST00000572205 SUGT1Q9Y2Z0 365 aa10.75□□□□□ -0.69
SMG6-210ENST00000572205 DAGLAQ9Y4D2 1042 aa10.75□□□□□ -0.69
SMG6-210ENST00000572205 CLRN2A0PK11 232 aa10.74□□□□□ -0.69
SMG6-210ENST00000572205 DIXDC1Q155Q3 683 aa10.74□□□□□ -0.69
SMG6-210ENST00000572205 CYP4F22Q6NT55 531 aa10.74□□□□□ -0.69
SMG6-210ENST00000572205 MOB2Q70IA6 237 aa10.74□□□□□ -0.69
SMG6-210ENST00000572205 SULF1Q8IWU6 871 aa10.74□□□□□ -0.69
SMG6-210ENST00000572205 OGFOD1Q8N543 542 aa10.74□□□□□ -0.69
SMG6-210ENST00000572205 DCPSQ96C86 337 aaKnown RBP10.74□□□□□ -0.69
SMG6-210ENST00000572205 MRIQ9BWK5 157 aa10.74□□□□□ -0.69
SMG6-210ENST00000572205 GBA2Q9HCG7 927 aaPredicted RBP10.74□□□□□ -0.69
SMG6-210ENST00000572205 FZD1Q9UP38 647 aa10.74□□□□□ -0.69
SMG6-210ENST00000572205 MYH1P12882 1939 aa10.74□□□□□ -0.69
SMG6-210ENST00000572205 SURF6O75683 361 aaKnown RBP10.73□□□□□ -0.69
SMG6-210ENST00000572205 PRR29P0C7W0 189 aa10.73□□□□□ -0.69
SMG6-210ENST00000572205 MS4A1P11836 297 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms