RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 LINS1Q8NG48 757 aa14.45□□□□□ -0.1
CHMP6-202ENST00000571457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.1
CHMP6-202ENST00000571457 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
CHMP6-202ENST00000571457 TEPSINQ96N21 525 aa14.45□□□□□ -0.1
CHMP6-202ENST00000571457 HTATIP2Q9BUP3 242 aa14.45□□□□□ -0.1
CHMP6-202ENST00000571457 TDRD3Q9H7E2 651 aaKnown RBP14.45□□□□□ -0.1
CHMP6-202ENST00000571457 TTF2Q9UNY4 1162 aaKnown RBP14.45□□□□□ -0.1
CHMP6-202ENST00000571457 JAG2Q9Y219 1238 aa14.45□□□□□ -0.1
CHMP6-202ENST00000571457 SPDYE5A6NIY4 337 aa14.44□□□□□ -0.1
CHMP6-202ENST00000571457 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
CHMP6-202ENST00000571457 DZIP1LQ8IYY4 767 aaKnown RBP14.44□□□□□ -0.1
CHMP6-202ENST00000571457 HOOK2Q96ED9 719 aa14.44□□□□□ -0.1
CHMP6-202ENST00000571457 RBM27Q9P2N5 1060 aaKnown RBP14.44□□□□□ -0.1
CHMP6-202ENST00000571457 TCP10L2B9ZVM9 353 aa14.43□□□□□ -0.1
CHMP6-202ENST00000571457 HOXD10P28358 340 aa14.43□□□□□ -0.1
CHMP6-202ENST00000571457 ERO1BQ86YB8 467 aa14.43□□□□□ -0.1
CHMP6-202ENST00000571457 SLC17A8Q8NDX2 589 aa14.43□□□□□ -0.1
CHMP6-202ENST00000571457 DNAAF4Q8WXU2 420 aa14.43□□□□□ -0.1
CHMP6-202ENST00000571457 ARHGAP39Q9C0H5 1083 aa14.43□□□□□ -0.1
CHMP6-202ENST00000571457 TMEM39BQ9GZU3 492 aa14.43□□□□□ -0.1
CHMP6-202ENST00000571457 CHMP3Q9Y3E7 222 aa14.43□□□□□ -0.1
CHMP6-202ENST00000571457 NR2E3Q9Y5X4 410 aa14.43□□□□□ -0.1
CHMP6-202ENST00000571457 DLL1O00548 723 aa14.42□□□□□ -0.1
CHMP6-202ENST00000571457 FLIIQ13045 1269 aa14.42□□□□□ -0.1
CHMP6-202ENST00000571457 FKBP5Q13451 457 aaPredicted RBP14.42□□□□□ -0.1
CHMP6-202ENST00000571457 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
CHMP6-202ENST00000571457 TWISTNBQ3B726 338 aaPredicted RBP14.42□□□□□ -0.1
CHMP6-202ENST00000571457 TAF7LQ5H9L4 462 aa14.42□□□□□ -0.1
CHMP6-202ENST00000571457 G2E3Q7L622 706 aa14.42□□□□□ -0.1
CHMP6-202ENST00000571457 BTBD19C9JJ37 291 aa14.41□□□□□ -0.1
CHMP6-202ENST00000571457 PLIN1O60240 522 aa14.41□□□□□ -0.1
CHMP6-202ENST00000571457 GJB1P08034 283 aa14.41□□□□□ -0.1
CHMP6-202ENST00000571457 HIBADHP31937 336 aaKnown RBP14.41□□□□□ -0.1
CHMP6-202ENST00000571457 LDHAL6AQ6ZMR3 332 aa14.41□□□□□ -0.1
CHMP6-202ENST00000571457 CDAN1Q8IWY9 1227 aa14.41□□□□□ -0.1
CHMP6-202ENST00000571457 TDRD7Q8NHU6 1098 aaKnown RBP14.41□□□□□ -0.1
CHMP6-202ENST00000571457 RAET1EQ8TD07 263 aa14.41□□□□□ -0.1
CHMP6-202ENST00000571457 CNNM1Q9NRU3 951 aa14.41□□□□□ -0.1
CHMP6-202ENST00000571457 SRRDQ9UH36 339 aa14.41□□□□□ -0.1
CHMP6-202ENST00000571457 A0A1W2PPC1 479 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 IRF6O14896 467 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 GRK4P32298 578 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 CRKP46108 304 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 GJA8P48165 433 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 FOXO4P98177 505 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
CHMP6-202ENST00000571457 PPIL2Q13356 520 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 UBE4AQ14139 1066 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 MTFR1Q15390 333 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 TSR2Q969E8 191 aaKnown RBP14.4□□□□□ -0.1
CHMP6-202ENST00000571457 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 WRNIP1Q96S55 665 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 TMOD2Q9NZR1 351 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 SNCAIPQ9Y6H5 919 aa14.4□□□□□ -0.1
CHMP6-202ENST00000571457 ARAP2Q8WZ64 1704 aa14.39□□□□□ -0.11
CHMP6-202ENST00000571457 FMNL1O95466 1100 aaPredicted RBP14.39□□□□□ -0.11
CHMP6-202ENST00000571457 PSMC4P43686 418 aa14.39□□□□□ -0.11
CHMP6-202ENST00000571457 FKBP1CQ5VVH2 108 aa14.39□□□□□ -0.11
CHMP6-202ENST00000571457 LMBR1LQ6UX01 489 aa14.39□□□□□ -0.11
CHMP6-202ENST00000571457 C17orf99Q6UX52 265 aa14.39□□□□□ -0.11
CHMP6-202ENST00000571457 TRIM47Q96LD4 638 aa14.39□□□□□ -0.11
CHMP6-202ENST00000571457 BIN2Q9UBW5 565 aaPredicted RBP14.39□□□□□ -0.11
CHMP6-202ENST00000571457 A0A1B0GUL6 1792 aa14.39□□□□□ -0.11
CHMP6-202ENST00000571457 CCL5P13501 91 aa14.38□□□□□ -0.11
CHMP6-202ENST00000571457 UBXN2AP68543 259 aa14.38□□□□□ -0.11
CHMP6-202ENST00000571457 PPATQ06203 517 aa14.38□□□□□ -0.11
CHMP6-202ENST00000571457 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
CHMP6-202ENST00000571457 DCAF15Q66K64 600 aa14.38□□□□□ -0.11
CHMP6-202ENST00000571457 UBE2Q1Q7Z7E8 422 aa14.38□□□□□ -0.11
CHMP6-202ENST00000571457 FAM83AQ86UY5 434 aa14.38□□□□□ -0.11
CHMP6-202ENST00000571457 TBC1D22AQ8WUA7 517 aa14.38□□□□□ -0.11
CHMP6-202ENST00000571457 ZKSCAN4Q969J2 545 aaPredicted RBP14.38□□□□□ -0.11
CHMP6-202ENST00000571457 PRO3102Q9H379 93 aa14.38□□□□□ -0.11
CHMP6-202ENST00000571457 RIPOR2Q9Y4F9 1068 aa14.38□□□□□ -0.11
CHMP6-202ENST00000571457 COL6A3P12111 3177 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 LAMA3Q16787 3333 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 CACNA1FO60840 1977 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 CAPN2P17655 700 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 OSBPP22059 807 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 GYG1P46976 350 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 VPS37DQ86XT2 251 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 TEKT1Q969V4 418 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 FAM84BQ96KN1 310 aaPredicted RBP14.37□□□□□ -0.11
CHMP6-202ENST00000571457 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 CPA4Q9UI42 421 aa14.37□□□□□ -0.11
CHMP6-202ENST00000571457 ZSWIM8A7E2V4 1837 aa14.36□□□□□ -0.11
CHMP6-202ENST00000571457 ZBTB7BO15156 539 aaPredicted RBP14.36□□□□□ -0.11
CHMP6-202ENST00000571457 ZNF594Q96JF6 807 aaPredicted RBP14.36□□□□□ -0.11
CHMP6-202ENST00000571457 MRIQ9BWK5 157 aa14.36□□□□□ -0.11
CHMP6-202ENST00000571457 ZNF341Q9BYN7 854 aa14.36□□□□□ -0.11
CHMP6-202ENST00000571457 MYPNQ86TC9 1320 aa14.36□□□□□ -0.11
CHMP6-202ENST00000571457 PDHXO00330 501 aa14.35□□□□□ -0.11
CHMP6-202ENST00000571457 FRAT2O75474 233 aaPredicted RBP14.35□□□□□ -0.11
CHMP6-202ENST00000571457 ECM2O94769 699 aaPredicted RBP14.35□□□□□ -0.11
CHMP6-202ENST00000571457 FARP2O94887 1054 aaPredicted RBP14.35□□□□□ -0.11
CHMP6-202ENST00000571457 CACNB3P54284 484 aa14.35□□□□□ -0.11
CHMP6-202ENST00000571457 CCDC27Q2M243 656 aa14.35□□□□□ -0.11
CHMP6-202ENST00000571457 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
CHMP6-202ENST00000571457 SLAIN1Q8ND83 568 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms