RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 NXPE3Q969Y0 559 aa7.84□□□□□ -1.15
KARSP3-201ENST00000571212 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
KARSP3-201ENST00000571212 RAPGEF6Q8TEU7 1601 aa7.84□□□□□ -1.15
KARSP3-201ENST00000571212 PTPRMP28827 1452 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 POLR3DP05423 398 aaPredicted RBP7.83□□□□□ -1.16
KARSP3-201ENST00000571212 NLRP12P59046 1061 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 ARMC10Q8N2F6 343 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 SNX29Q8TEQ0 813 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 PMEPA1Q969W9 287 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 ZFP64Q9NPA5 681 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 SOX13Q9UN79 622 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 BCORL1Q5H9F3 1711 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 CABP4P57796 275 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 ECM1Q16610 540 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 GJD3Q8N144 294 aa7.83□□□□□ -1.16
KARSP3-201ENST00000571212 TMEM102Q8N9M5 508 aaPredicted RBP7.83□□□□□ -1.16
KARSP3-201ENST00000571212 HYAL3O43820 417 aaPredicted RBP7.82□□□□□ -1.16
KARSP3-201ENST00000571212 RAPGEF3O95398 923 aa7.82□□□□□ -1.16
KARSP3-201ENST00000571212 FSTP19883 344 aa7.82□□□□□ -1.16
KARSP3-201ENST00000571212 USP5P45974 858 aa7.82□□□□□ -1.16
KARSP3-201ENST00000571212 PEAR1Q5VY43 1037 aaPredicted RBP7.82□□□□□ -1.16
KARSP3-201ENST00000571212 ASAP3Q8TDY4 903 aa7.82□□□□□ -1.16
KARSP3-201ENST00000571212 FBXO41Q8TF61 875 aa7.82□□□□□ -1.16
KARSP3-201ENST00000571212 USTQ9Y2C2 406 aa7.82□□□□□ -1.16
KARSP3-201ENST00000571212 FRMPD1Q5SYB0 1578 aa7.81□□□□□ -1.16
KARSP3-201ENST00000571212 SOX1O00570 391 aaPredicted RBP7.81□□□□□ -1.16
KARSP3-201ENST00000571212 ICMTO60725 284 aa7.81□□□□□ -1.16
KARSP3-201ENST00000571212 PIP4K2BP78356 416 aa7.81□□□□□ -1.16
KARSP3-201ENST00000571212 VN1R5Q7Z5H4 357 aa7.81□□□□□ -1.16
KARSP3-201ENST00000571212 METTL12A8MUP2 240 aa7.8□□□□□ -1.16
KARSP3-201ENST00000571212 H3BRB1 525 aa7.8□□□□□ -1.16
KARSP3-201ENST00000571212 EHHADHQ08426 723 aa7.8□□□□□ -1.16
KARSP3-201ENST00000571212 TUT1Q9H6E5 874 aaKnown RBP7.8□□□□□ -1.16
KARSP3-201ENST00000571212 ZFYVE28Q9HCC9 887 aa7.8□□□□□ -1.16
KARSP3-201ENST00000571212 RAXQ9Y2V3 346 aa7.8□□□□□ -1.16
KARSP3-201ENST00000571212 MADDQ8WXG6 1647 aa7.8□□□□□ -1.16
KARSP3-201ENST00000571212 NUP153P49790 1475 aaKnown RBP7.8□□□□□ -1.16
KARSP3-201ENST00000571212 EEA1Q15075 1411 aa7.79□□□□□ -1.16
KARSP3-201ENST00000571212 RICTORQ6R327 1708 aa7.79□□□□□ -1.16
KARSP3-201ENST00000571212 EDN3P14138 238 aa7.79□□□□□ -1.16
KARSP3-201ENST00000571212 LRP8Q14114 963 aa7.79□□□□□ -1.16
KARSP3-201ENST00000571212 BSNDQ8WZ55 320 aa7.79□□□□□ -1.16
KARSP3-201ENST00000571212 OSGEPQ9NPF4 335 aa7.79□□□□□ -1.16
KARSP3-201ENST00000571212 AMOTL2Q9Y2J4 779 aa7.79□□□□□ -1.16
KARSP3-201ENST00000571212 PCF11O94913 1555 aaKnown RBP7.79□□□□□ -1.16
KARSP3-201ENST00000571212 ARID4BQ4LE39 1312 aaPredicted RBP7.79□□□□□ -1.16
KARSP3-201ENST00000571212 ARHGEF40Q8TER5 1519 aa7.79□□□□□ -1.16
KARSP3-201ENST00000571212 WNT8BQ93098 351 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 UTP4Q969X6 686 aaKnown RBP7.78□□□□□ -1.16
KARSP3-201ENST00000571212 FAM46AQ96IP4 442 aaKnown RBP7.78□□□□□ -1.16
KARSP3-201ENST00000571212 CEP41Q9BYV8 373 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 STOML1Q9UBI4 398 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 RNF112Q9ULX5 631 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 DENND4BO75064 1496 aaPredicted RBP7.78□□□□□ -1.16
KARSP3-201ENST00000571212 CFAP74Q9C0B2 1584 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 RIMS1Q86UR5 1692 aaKnown RBP7.78□□□□□ -1.16
KARSP3-201ENST00000571212 PLEKHD1A6NEE1 506 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 C19orf57Q0VDD7 668 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 IKBKEQ14164 716 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 USPL1Q5W0Q7 1092 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 GLYCTKQ8IVS8 523 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 RETREG2Q8NC44 543 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 EGFL7Q9UHF1 273 aa7.78□□□□□ -1.16
KARSP3-201ENST00000571212 FHOD3Q2V2M9 1422 aa7.77□□□□□ -1.17
KARSP3-201ENST00000571212 AKNAQ7Z591 1439 aa7.77□□□□□ -1.17
KARSP3-201ENST00000571212 LMTK3Q96Q04 1460 aa7.77□□□□□ -1.17
KARSP3-201ENST00000571212 DHX15O43143 795 aaKnown RBP7.77□□□□□ -1.17
KARSP3-201ENST00000571212 PREPP48147 710 aa7.77□□□□□ -1.17
KARSP3-201ENST00000571212 ARHGAP4P98171 946 aa7.77□□□□□ -1.17
KARSP3-201ENST00000571212 RUSC1Q9BVN2 902 aa7.77□□□□□ -1.17
KARSP3-201ENST00000571212 BHLHE41Q9C0J9 482 aaPredicted RBP7.77□□□□□ -1.17
KARSP3-201ENST00000571212 BRPF3Q9ULD4 1205 aa7.77□□□□□ -1.17
KARSP3-201ENST00000571212 ZMYM4Q5VZL5 1548 aa7.76□□□□□ -1.17
KARSP3-201ENST00000571212 HMX2A2RU54 273 aa7.76□□□□□ -1.17
KARSP3-201ENST00000571212 SSTR4P31391 388 aa7.76□□□□□ -1.17
KARSP3-201ENST00000571212 ARL4DP49703 201 aa7.76□□□□□ -1.17
KARSP3-201ENST00000571212 NBPF11Q86T75 865 aa7.76□□□□□ -1.17
KARSP3-201ENST00000571212 TRIM42Q8IWZ5 723 aa7.76□□□□□ -1.17
KARSP3-201ENST00000571212 POGZQ7Z3K3 1410 aa7.76□□□□□ -1.17
KARSP3-201ENST00000571212 FANCAO15360 1455 aa7.75□□□□□ -1.17
KARSP3-201ENST00000571212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.75□□□□□ -1.17
KARSP3-201ENST00000571212 DLGAP3O95886 979 aa7.75□□□□□ -1.17
KARSP3-201ENST00000571212 ESRRAP11474 423 aaPredicted RBP7.75□□□□□ -1.17
KARSP3-201ENST00000571212 MYRFLQ96LU7 910 aa7.75□□□□□ -1.17
KARSP3-201ENST00000571212 USP26Q9BXU7 913 aa7.75□□□□□ -1.17
KARSP3-201ENST00000571212 RNF208Q9H0X6 261 aa7.75□□□□□ -1.17
KARSP3-201ENST00000571212 C7orf69Q9H7B7 122 aa7.75□□□□□ -1.17
KARSP3-201ENST00000571212 MAGI2Q86UL8 1455 aa7.75□□□□□ -1.17
KARSP3-201ENST00000571212 EFCAB5A4FU69 1503 aa7.74□□□□□ -1.17
KARSP3-201ENST00000571212 TTC37Q6PGP7 1564 aa7.74□□□□□ -1.17
KARSP3-201ENST00000571212 A0A1W2PP55 124 aa7.74□□□□□ -1.17
KARSP3-201ENST00000571212 SART1O43290 800 aaKnown RBP7.74□□□□□ -1.17
KARSP3-201ENST00000571212 IGLV1-40P01703 118 aa7.74□□□□□ -1.17
KARSP3-201ENST00000571212 ORC1Q13415 861 aa7.74□□□□□ -1.17
KARSP3-201ENST00000571212 SPRED3Q2MJR0 410 aa7.74□□□□□ -1.17
KARSP3-201ENST00000571212 B4GALNT3Q6L9W6 998 aa7.74□□□□□ -1.17
KARSP3-201ENST00000571212 ZFYVE16Q7Z3T8 1539 aa7.74□□□□□ -1.17
KARSP3-201ENST00000571212 MED26O95402 600 aa7.73□□□□□ -1.17
KARSP3-201ENST00000571212 TGFB1P01137 390 aa7.73□□□□□ -1.17
KARSP3-201ENST00000571212 BMP3P12645 472 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms