RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 CABP5Q9NP86 173 aa17.44■□□□□ 0.38
CIITA-204ENST00000570546 ANTXR1Q9H6X2 564 aa17.44■□□□□ 0.38
CIITA-204ENST00000570546 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
CIITA-204ENST00000570546 MAP2K1Q02750 393 aaPredicted RBP17.44■□□□□ 0.38
CIITA-204ENST00000570546 PTH1RQ03431 593 aa17.44■□□□□ 0.38
CIITA-204ENST00000570546 ZNF594Q96JF6 807 aaPredicted RBP17.44■□□□□ 0.38
CIITA-204ENST00000570546 TMEM87BQ96K49 555 aa17.44■□□□□ 0.38
CIITA-204ENST00000570546 DRC1Q96MC2 740 aa17.44■□□□□ 0.38
CIITA-204ENST00000570546 C19orf44Q9H6X5 657 aa17.44■□□□□ 0.38
CIITA-204ENST00000570546 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
CIITA-204ENST00000570546 RGS12O14924 1447 aa17.44■□□□□ 0.38
CIITA-204ENST00000570546 OTUD7BQ6GQQ9 843 aa17.43■□□□□ 0.38
CIITA-204ENST00000570546 APPBP2Q92624 585 aa17.43■□□□□ 0.38
CIITA-204ENST00000570546 FAM89AQ96GI7 184 aa17.43■□□□□ 0.38
CIITA-204ENST00000570546 PLCD4Q9BRC7 762 aa17.43■□□□□ 0.38
CIITA-204ENST00000570546 PUF60Q9UHX1 559 aaKnown RBP17.43■□□□□ 0.38
CIITA-204ENST00000570546 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
CIITA-204ENST00000570546 HLA-DOAP06340 250 aa17.43■□□□□ 0.38
CIITA-204ENST00000570546 IFI16Q16666 785 aaKnown RBP17.43■□□□□ 0.38
CIITA-204ENST00000570546 ACSBG1Q96GR2 724 aa17.43■□□□□ 0.38
CIITA-204ENST00000570546 RBM28Q9NW13 759 aaKnown RBP17.43■□□□□ 0.38
CIITA-204ENST00000570546 AATKQ6ZMQ8 1374 aa17.43■□□□□ 0.38
CIITA-204ENST00000570546 FSD2A1L4K1 749 aa17.43■□□□□ 0.38
CIITA-204ENST00000570546 ZRSR2Q15696 482 aaKnown RBP17.43■□□□□ 0.38
CIITA-204ENST00000570546 GCOM1H8Y6P7 765 aaPredicted RBP17.42■□□□□ 0.38
CIITA-204ENST00000570546 TACC1O75410 805 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
CIITA-204ENST00000570546 MYZAPP0CAP1 466 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 CETN1Q12798 172 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 PRPF4BQ13523 1007 aaKnown RBP17.42■□□□□ 0.38
CIITA-204ENST00000570546 IL17REQ8NFR9 667 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 KCNH3Q9ULD8 1083 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 AKR1B15C9JRZ8 316 aaPredicted RBP17.42■□□□□ 0.38
CIITA-204ENST00000570546 KRT86O43790 486 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 RILPL1Q5EBL4 403 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 SPECC1Q5M775 1068 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
CIITA-204ENST00000570546 FANCCQ00597 558 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 IQUBQ8NA54 791 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 GUCA1BQ9UMX6 200 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
CIITA-204ENST00000570546 KDRP35968 1356 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 ITGA6P23229 1130 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 STXBP4Q6ZWJ1 553 aa17.42■□□□□ 0.38
CIITA-204ENST00000570546 GPAA1O43292 621 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 ATP5JP18859 108 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 NLRP12P59046 1061 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 PLA2R1Q13018 1463 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 TUBB4BP68371 445 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 GTF3C6Q969F1 213 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 C6orf50Q9HD87 102 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 TRPM1Q7Z4N2 1603 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 TBCAO75347 108 aaKnown RBP17.41■□□□□ 0.38
CIITA-204ENST00000570546 CNGA4Q8IV77 575 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 ZFP91Q96JP5 570 aaPredicted RBP17.41■□□□□ 0.38
CIITA-204ENST00000570546 NLRP3Q96P20 1036 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 IMPACTQ9P2X3 320 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 BICDL2A1A5D9 508 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 SETDB2Q96T68 719 aa17.41■□□□□ 0.38
CIITA-204ENST00000570546 ZNF500O60304 480 aaPredicted RBP17.4■□□□□ 0.38
CIITA-204ENST00000570546 ZNF202O95125 648 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 RFC4P35249 363 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 MMRN2Q9H8L6 949 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 ZSWIM6Q9HCJ5 1215 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 PPP1R1BQ9UD71 204 aaPredicted RBP17.4■□□□□ 0.38
CIITA-204ENST00000570546 DEXIO95424 95 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 KIF5AQ12840 1032 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 ERMNQ8TAM6 284 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 TAOK3Q9H2K8 898 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 KIF1BO60333 1816 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 CFAP74Q9C0B2 1584 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 ZNF174Q15697 407 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 SMAP1Q8IYB5 467 aaPredicted RBP17.4■□□□□ 0.38
CIITA-204ENST00000570546 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 CTNNBL1Q8WYA6 563 aaPredicted RBP17.4■□□□□ 0.38
CIITA-204ENST00000570546 VWA3AA6NCI4 1184 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 NEURL1BA8MQ27 555 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 CUTAO60888 179 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 SPAG5Q96R06 1193 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 DSCC1Q9BVC3 393 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 MCM9Q9NXL9 1143 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 MTMR6Q9Y217 621 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 GSTTP1A0A1W2PQM5 241 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 IVLP07476 585 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 BEND3Q5T5X7 828 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 CAPZA3Q96KX2 299 aa17.4■□□□□ 0.38
CIITA-204ENST00000570546 ATP7BP35670 1465 aa17.39■□□□□ 0.38
CIITA-204ENST00000570546 A0A0D9SFI3 127 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 KCNQ3O43525 872 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 ARMT1Q9H993 441 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 TPCN1Q9ULQ1 816 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 CTNND2Q9UQB3 1225 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 E7EWF7 191 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 EVCP57679 992 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 DTHD1Q6ZMT9 781 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 SYCP3Q8IZU3 236 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 CHAMP1Q96JM3 812 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 CCDC42Q96M95 316 aa17.39■□□□□ 0.37
CIITA-204ENST00000570546 RHOXF2BP0C7M4 288 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms