RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 POLD1P28340 1107 aa13.14□□□□□ -0.31
NPLOC4-203ENST00000570300 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-203ENST00000570300 MAGEB6Q8N7X4 407 aa13.14□□□□□ -0.31
NPLOC4-203ENST00000570300 TBC1D22AQ8WUA7 517 aa13.14□□□□□ -0.31
NPLOC4-203ENST00000570300 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-203ENST00000570300 EYA3Q99504 573 aa13.14□□□□□ -0.31
NPLOC4-203ENST00000570300 SGIP1Q9BQI5 828 aa13.14□□□□□ -0.31
NPLOC4-203ENST00000570300 SUGT1Q9Y2Z0 365 aa13.14□□□□□ -0.31
NPLOC4-203ENST00000570300 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 CHRNA5P30532 468 aa13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 SLFNL1Q499Z3 407 aa13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 SLC51AQ86UW1 340 aa13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 TTC14Q96N46 770 aa13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 ZC3H12CQ9C0D7 883 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 VPS33BQ9H267 617 aa13.13□□□□□ -0.31
NPLOC4-203ENST00000570300 C6orf229H3BNL8 230 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 CYP21A2P08686 494 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 HMGB1P09429 215 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 KCNA3P22001 575 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 NEK4P51957 841 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 CERS3Q8IU89 383 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 TTLL6Q8N841 843 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 SUPT20HQ8NEM7 779 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 RAI14Q9P0K7 980 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 ABCF2Q9UG63 623 aa13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-203ENST00000570300 PATL2C9JE40 543 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 FGAP02671 866 aa13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 CYP7A1P22680 504 aa13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 GSTO1P78417 241 aa13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 RUFY3Q7L099 469 aa13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 PODNQ7Z5L7 613 aa13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 FAM163AQ96GL9 167 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 RIOK1Q9BRS2 568 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 CYP46A1Q9Y6A2 500 aa13.11□□□□□ -0.31
NPLOC4-203ENST00000570300 MBD4O95243 580 aa13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 ZBTB7AO95365 584 aa13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 PPP4CP60510 307 aa13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 FKBP1AP62942 108 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 MECOMQ03112 1051 aa13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 R3HDM1Q15032 1099 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 FBXL16Q8N461 479 aa13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 PSMD1Q99460 953 aa13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 LAMA4Q16363 1823 aa13.1□□□□□ -0.31
NPLOC4-203ENST00000570300 GSG1L2A8MUP6 293 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 LDHCP07864 332 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 DPEP1P16444 411 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 CASTP20810 708 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 RPS6KB1P23443 525 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 PRDX5P30044 214 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 BRCA1P38398 1863 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 CUL4AQ13619 759 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 ADGRA1Q86SQ6 560 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 JAKMIP1Q96N16 626 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 GPR101Q96P66 508 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 NACAP1Q9BZK3 213 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 CHD4Q14839 1912 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
NPLOC4-203ENST00000570300 MAGEB6P1A0A0J9YX57 407 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 DDIT3P35638 169 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 PTGER2P43116 358 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 SLC4A3P48751 1232 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 CHAF1AQ13111 956 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 CCDC93Q567U6 631 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 BLOC1S2Q6QNY1 142 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 OLFM4Q6UX06 510 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 LCORLQ8N3X6 602 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 INTS4Q96HW7 963 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 NEK1Q96PY6 1258 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 MRIQ9BWK5 157 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 UPF3BQ9BZI7 483 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 PIM2Q9P1W9 311 aa13.08□□□□□ -0.32
NPLOC4-203ENST00000570300 E7EWF7 191 aa13.07□□□□□ -0.32
NPLOC4-203ENST00000570300 ZNF213O14771 459 aa13.07□□□□□ -0.32
NPLOC4-203ENST00000570300 NT5C2P49902 561 aa13.07□□□□□ -0.32
NPLOC4-203ENST00000570300 DZIP1Q86YF9 867 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-203ENST00000570300 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-203ENST00000570300 AGXT2Q9BYV1 514 aa13.07□□□□□ -0.32
NPLOC4-203ENST00000570300 ARMT1Q9H993 441 aa13.07□□□□□ -0.32
NPLOC4-203ENST00000570300 EPB41L4AQ9HCS5 686 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-203ENST00000570300 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
NPLOC4-203ENST00000570300 PDRG1Q9NUG6 133 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms