RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 TSKSQ9UJT2 592 aa21.29■■□□□ 1
MAP1LC3B-208ENST00000570189 CLRN2A0PK11 232 aa21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 PPP1R12BO60237 982 aaPredicted RBP21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 FRAT2O75474 233 aaPredicted RBP21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 BCAR3O75815 825 aa21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 TM4SF4P48230 202 aa21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 RBM5P52756 815 aaKnown RBP eCLIP21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 HNRNPUQ00839 825 aaKnown RBP eCLIP21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 WDR66Q8TBY9 1149 aa21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 ZNF70Q9UC06 446 aaPredicted RBP21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 IQSEC3Q9UPP2 1182 aaPredicted RBP21.28■■□□□ 1
MAP1LC3B-208ENST00000570189 GRIK5Q16478 980 aa21.27■■□□□ 1
MAP1LC3B-208ENST00000570189 ATP2B3Q16720 1220 aa21.27■■□□□ 1
MAP1LC3B-208ENST00000570189 TEKT1Q969V4 418 aa21.27■■□□□ 1
MAP1LC3B-208ENST00000570189 ZDHHC15Q96MV8 337 aa21.27■■□□□ 1
MAP1LC3B-208ENST00000570189 VEZTQ9HBM0 779 aa21.27■■□□□ 1
MAP1LC3B-208ENST00000570189 ZBED9Q6R2W3 1325 aa21.27■□□□□ 0.99
MAP1LC3B-208ENST00000570189 SEMA3EO15041 775 aa21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 CHAF1AQ13111 956 aaPredicted RBP21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 RASA3Q14644 834 aa21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 NOM1Q5C9Z4 860 aaKnown RBP21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 FKBP1CQ5VVH2 108 aa21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 HHIPL2Q6UWX4 724 aa21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 CFHR5Q9BXR6 569 aa21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 SIL1Q9H173 461 aa21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 ANGEL1Q9UNK9 670 aaKnown RBP21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 SALL1Q9NSC2 1324 aa21.26■□□□□ 0.99
MAP1LC3B-208ENST00000570189 ZBTB48P10074 688 aaPredicted RBP21.25■□□□□ 0.99
MAP1LC3B-208ENST00000570189 ABHD8Q96I13 439 aa21.25■□□□□ 0.99
MAP1LC3B-208ENST00000570189 TEPSINQ96N21 525 aa21.25■□□□□ 0.99
MAP1LC3B-208ENST00000570189 TDRD3Q9H7E2 651 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3B-208ENST00000570189 PDS5AQ29RF7 1337 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3B-208ENST00000570189 TRPA1O75762 1119 aa21.24■□□□□ 0.99
MAP1LC3B-208ENST00000570189 TNNI2P48788 182 aa21.24■□□□□ 0.99
MAP1LC3B-208ENST00000570189 SREBF2Q12772 1141 aa21.24■□□□□ 0.99
MAP1LC3B-208ENST00000570189 NBPF12Q5TAG4 269 aaPredicted RBP21.24■□□□□ 0.99
MAP1LC3B-208ENST00000570189 SPRYD7Q5W111 196 aa21.24■□□□□ 0.99
MAP1LC3B-208ENST00000570189 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
MAP1LC3B-208ENST00000570189 GNL3LQ9NVN8 582 aaKnown RBP21.24■□□□□ 0.99
MAP1LC3B-208ENST00000570189 PA2G4Q9UQ80 394 aaKnown RBP21.24■□□□□ 0.99
MAP1LC3B-208ENST00000570189 RPAP1Q9BWH6 1393 aaPredicted RBP21.23■□□□□ 0.99
MAP1LC3B-208ENST00000570189 SRGAP3O43295 1099 aa21.23■□□□□ 0.99
MAP1LC3B-208ENST00000570189 GNAI2P04899 355 aa21.23■□□□□ 0.99
MAP1LC3B-208ENST00000570189 IREB2P48200 963 aaKnown RBP21.23■□□□□ 0.99
MAP1LC3B-208ENST00000570189 FAM83AQ86UY5 434 aa21.23■□□□□ 0.99
MAP1LC3B-208ENST00000570189 USP2O75604 605 aaPredicted RBP21.22■□□□□ 0.99
MAP1LC3B-208ENST00000570189 CAPN15O75808 1086 aa21.22■□□□□ 0.99
MAP1LC3B-208ENST00000570189 INHBEP58166 350 aa21.22■□□□□ 0.99
MAP1LC3B-208ENST00000570189 APOBEC3HQ6NTF7 200 aaKnown RBP21.22■□□□□ 0.99
MAP1LC3B-208ENST00000570189 FRAT1Q92837 279 aaPredicted RBP21.22■□□□□ 0.99
MAP1LC3B-208ENST00000570189 DENND2AQ9ULE3 1009 aa21.22■□□□□ 0.99
MAP1LC3B-208ENST00000570189 MYH2Q9UKX2 1941 aa21.21■□□□□ 0.99
MAP1LC3B-208ENST00000570189 PRKG1Q13976 671 aa21.21■□□□□ 0.99
MAP1LC3B-208ENST00000570189 ANKRD13AQ8IZ07 590 aa21.21■□□□□ 0.99
MAP1LC3B-208ENST00000570189 SLC10A4Q96EP9 437 aa21.21■□□□□ 0.99
MAP1LC3B-208ENST00000570189 TNNQ9UQP3 1299 aa21.21■□□□□ 0.99
MAP1LC3B-208ENST00000570189 AKAP2Q9Y2D5 859 aa21.21■□□□□ 0.99
MAP1LC3B-208ENST00000570189 MANSC4A6NHS7 340 aaPredicted RBP21.19■□□□□ 0.98
MAP1LC3B-208ENST00000570189 TMEM57Q8N5G2 664 aa21.19■□□□□ 0.98
MAP1LC3B-208ENST00000570189 WNK4Q96J92 1243 aa21.19■□□□□ 0.98
MAP1LC3B-208ENST00000570189 MCOLN1Q9GZU1 580 aa21.19■□□□□ 0.98
MAP1LC3B-208ENST00000570189 FZD1Q9UP38 647 aa21.19■□□□□ 0.98
MAP1LC3B-208ENST00000570189 TCP10L2B9ZVM9 353 aa21.18■□□□□ 0.98
MAP1LC3B-208ENST00000570189 ALDH1A1P00352 501 aa21.18■□□□□ 0.98
MAP1LC3B-208ENST00000570189 PHKA1P46020 1223 aa21.18■□□□□ 0.98
MAP1LC3B-208ENST00000570189 CCDC102BQ68D86 513 aa21.18■□□□□ 0.98
MAP1LC3B-208ENST00000570189 ZGPATQ8N5A5 531 aaKnown RBP21.18■□□□□ 0.98
MAP1LC3B-208ENST00000570189 CLUAP1Q96AJ1 413 aa21.18■□□□□ 0.98
MAP1LC3B-208ENST00000570189 CLMNQ96JQ2 1002 aa21.18■□□□□ 0.98
MAP1LC3B-208ENST00000570189 TMEM39BQ9GZU3 492 aa21.18■□□□□ 0.98
MAP1LC3B-208ENST00000570189 TMOD2Q9NZR1 351 aa21.18■□□□□ 0.98
MAP1LC3B-208ENST00000570189 HOOK2Q96ED9 719 aa21.17■□□□□ 0.98
MAP1LC3B-208ENST00000570189 PNMA6EA0A0J9YXQ4 647 aa21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 A0A1B0GUL7 405 aa21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 TESPA1A2RU30 521 aaPredicted RBP21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 LDHBP07195 334 aaKnown RBP21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 PRDX5P30044 214 aa21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 ADORA1P30542 326 aa21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 TFCP2Q12800 502 aa21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 POLA2Q14181 598 aa21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 MVPQ14764 893 aaKnown RBP21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 CDAN1Q8IWY9 1227 aa21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 DAGLAQ9Y4D2 1042 aa21.16■□□□□ 0.98
MAP1LC3B-208ENST00000570189 TIMM10P62072 90 aa21.15■□□□□ 0.98
MAP1LC3B-208ENST00000570189 DGKZQ13574 1117 aa21.15■□□□□ 0.98
MAP1LC3B-208ENST00000570189 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.15■□□□□ 0.98
MAP1LC3B-208ENST00000570189 SSH3Q8TE77 659 aa21.15■□□□□ 0.98
MAP1LC3B-208ENST00000570189 XAGE2Q96GT9 111 aa21.15■□□□□ 0.98
MAP1LC3B-208ENST00000570189 GAKO14976 1311 aa21.14■□□□□ 0.97
MAP1LC3B-208ENST00000570189 MKRN3Q13064 507 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3B-208ENST00000570189 RASGRF1Q13972 1273 aa21.14■□□□□ 0.97
MAP1LC3B-208ENST00000570189 IFNL1Q8IU54 200 aa21.14■□□□□ 0.97
MAP1LC3B-208ENST00000570189 FAM163AQ96GL9 167 aaPredicted RBP21.14■□□□□ 0.97
MAP1LC3B-208ENST00000570189 GJA5P36382 358 aa21.13■□□□□ 0.97
MAP1LC3B-208ENST00000570189 CTU1Q7Z7A3 348 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3B-208ENST00000570189 FAM151AQ8WW52 585 aa21.13■□□□□ 0.97
MAP1LC3B-208ENST00000570189 GPR108Q9NPR9 543 aa21.13■□□□□ 0.97
MAP1LC3B-208ENST00000570189 AK9Q5TCS8 1911 aa21.13■□□□□ 0.97
MAP1LC3B-208ENST00000570189 DOCK2Q92608 1830 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms