RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 TTF2Q9UNY4 1162 aaKnown RBP11.8□□□□□ -0.52
HCCAT5-201ENST00000569990 ASTN2O75129 1339 aaPredicted RBP11.8□□□□□ -0.52
HCCAT5-201ENST00000569990 WNT10BO00744 389 aa11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 RAB11FIP3O75154 756 aa11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 ARID4AP29374 1257 aaPredicted RBP11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 SCARF1Q14162 830 aa11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 NBPF9Q3BBW0 867 aa11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 ZBED3Q96IU2 234 aaPredicted RBP11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 IL1RAPL2Q9NP60 686 aa11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 GGA3Q9NZ52 723 aa11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 DBNLQ9UJU6 430 aaKnown RBP11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 SUGT1Q9Y2Z0 365 aa11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 PDS5AQ29RF7 1337 aaKnown RBP11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
HCCAT5-201ENST00000569990 MYH13Q9UKX3 1938 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 APBB1O00213 710 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 TRAF5O00463 557 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 GALR2O43603 387 aaPredicted RBP11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 APLP1P51693 650 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 AAMPQ13685 434 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 DLGAP5Q15398 846 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 CFAP100Q494V2 611 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 ANGEL2Q5VTE6 544 aaKnown RBP11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 CDC37L1Q7L3B6 337 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 GLIS2Q9BZE0 524 aaPredicted RBP11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 TLR7Q9NYK1 1049 aaKnown RBP11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 HMG20BQ9P0W2 317 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 SERPINA10Q9UK55 444 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 PITPNM2Q9BZ72 1349 aa11.78□□□□□ -0.52
HCCAT5-201ENST00000569990 UQCRFS1P1P0C7P4 283 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 PRDX5P30044 214 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 MCAMP43121 646 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 HDLBPQ00341 1268 aaKnown RBP11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 FMR1Q06787 632 aaKnown RBP eCLIP11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 CCDC158Q5M9N0 1113 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 TTC39AQ5SRH9 613 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 KRT26Q7Z3Y9 468 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 USP48Q86UV5 1035 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 AACSQ86V21 672 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 EXOC6Q8TAG9 804 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 DCPSQ96C86 337 aaKnown RBP11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 ZNF512BQ96KM6 892 aaPredicted RBP11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 DCTPP1Q9H773 170 aa11.77□□□□□ -0.53
HCCAT5-201ENST00000569990 ADM5C9JUS6 153 aa11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 LDHBP07195 334 aaKnown RBP11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 CRKP46108 304 aa11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 RBM5P52756 815 aaKnown RBP eCLIP11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 ZGPATQ8N5A5 531 aaKnown RBP11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 SPATA5Q8NB90 893 aa11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 PRMT6Q96LA8 375 aaPredicted RBP11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 MRIQ9BWK5 157 aa11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 LRRCC1Q9C099 1032 aa11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 MAST3O60307 1309 aa11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 AOX1Q06278 1338 aa11.76□□□□□ -0.53
HCCAT5-201ENST00000569990 HTRA3P83110 453 aa11.75□□□□□ -0.53
HCCAT5-201ENST00000569990 DLK2Q6UY11 383 aa11.75□□□□□ -0.53
HCCAT5-201ENST00000569990 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
HCCAT5-201ENST00000569990 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 MYO1BO43795 1136 aa11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 SMARCA5O60264 1052 aaPredicted RBP11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 IFIT2P09913 472 aaKnown RBP11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 HDAC1Q13547 482 aaPredicted RBP11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 CST9Q5W186 159 aa11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 HHIPL2Q6UWX4 724 aa11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 APOBEC3FQ8IUX4 373 aaKnown RBP11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 ZDHHC15Q96MV8 337 aa11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 SNRKQ9NRH2 765 aa11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 ABCF2Q9UG63 623 aa11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 SCAF8Q9UPN6 1271 aaKnown RBP11.74□□□□□ -0.53
HCCAT5-201ENST00000569990 CEP350Q5VT06 3117 aa11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 CLRN2A0PK11 232 aa11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 CELF2O95319 508 aaKnown RBP11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 ZAP70P43403 619 aa11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 IRX6P78412 446 aaPredicted RBP11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 DIXDC1Q155Q3 683 aa11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 SPTY2D1Q68D10 685 aaPredicted RBP11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 TBC1D9Q6ZT07 1266 aa11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 CDCA5Q96FF9 252 aa11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 TDRD3Q9H7E2 651 aaKnown RBP11.73□□□□□ -0.53
HCCAT5-201ENST00000569990 AKAP11Q9UKA4 1901 aa11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 CYP2E1P05181 493 aaPredicted RBP11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 DZIP1Q86YF9 867 aaKnown RBP11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 ZNF384Q8TF68 577 aa11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 ZNF408Q9H9D4 720 aa11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 ZNF70Q9UC06 446 aaPredicted RBP11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 DAGLAQ9Y4D2 1042 aa11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 POLR2AP24928 1970 aaKnown RBP11.72□□□□□ -0.53
HCCAT5-201ENST00000569990 GAKO14976 1311 aa11.71□□□□□ -0.53
HCCAT5-201ENST00000569990 MECOMQ03112 1051 aa11.71□□□□□ -0.53
HCCAT5-201ENST00000569990 PRAMEF18Q5VWM3 479 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms