RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 HMGB2P26583 209 aaKnown RBP8.52□□□□□ -1.05
UBFD1-209ENST00000569919 AAMPQ13685 434 aa8.52□□□□□ -1.05
UBFD1-209ENST00000569919 WDR44Q5JSH3 913 aa8.52□□□□□ -1.05
UBFD1-209ENST00000569919 ALKBH2Q6NS38 261 aa8.52□□□□□ -1.05
UBFD1-209ENST00000569919 C7orf43Q8WVR3 580 aa8.52□□□□□ -1.05
UBFD1-209ENST00000569919 IFT43Q96FT9 208 aa8.52□□□□□ -1.05
UBFD1-209ENST00000569919 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
UBFD1-209ENST00000569919 ZDHHC3Q9NYG2 299 aa8.52□□□□□ -1.05
UBFD1-209ENST00000569919 PNPLA7Q6ZV29 1317 aa8.52□□□□□ -1.05
UBFD1-209ENST00000569919 COL18A1P39060 1754 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 SLIT3O75094 1523 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 TOPAZ1Q8N9V7 1692 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 RHOQP17081 205 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 ETFBKMTQ8IXQ9 262 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 RHPN1Q8TCX5 695 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 ZNF428Q96B54 188 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 NLRP2Q9NX02 1062 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 CPSF1Q10570 1443 aaKnown RBP8.51□□□□□ -1.05
UBFD1-209ENST00000569919 ATP10DQ9P241 1426 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 ARHGEF28Q8N1W1 1705 aaKnown RBP8.51□□□□□ -1.05
UBFD1-209ENST00000569919 SHANK3Q9BYB0 1731 aa8.51□□□□□ -1.05
UBFD1-209ENST00000569919 TATP17735 454 aaPredicted RBP8.5□□□□□ -1.05
UBFD1-209ENST00000569919 CRIPAKQ8N1N5 446 aa8.5□□□□□ -1.05
UBFD1-209ENST00000569919 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
UBFD1-209ENST00000569919 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
UBFD1-209ENST00000569919 CD2APQ9Y5K6 639 aa8.5□□□□□ -1.05
UBFD1-209ENST00000569919 KAT6BQ8WYB5 2073 aa8.5□□□□□ -1.05
UBFD1-209ENST00000569919 TTC21AQ8NDW8 1320 aa8.5□□□□□ -1.05
UBFD1-209ENST00000569919 CENPJQ9HC77 1338 aaPredicted RBP8.5□□□□□ -1.05
UBFD1-209ENST00000569919 TNS2Q63HR2 1409 aa8.49□□□□□ -1.05
UBFD1-209ENST00000569919 NDUFB5O43674 189 aa8.49□□□□□ -1.05
UBFD1-209ENST00000569919 FZD6O60353 706 aa8.49□□□□□ -1.05
UBFD1-209ENST00000569919 ATCAYQ86WG3 371 aa8.49□□□□□ -1.05
UBFD1-209ENST00000569919 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
UBFD1-209ENST00000569919 ASB16Q96NS5 453 aa8.49□□□□□ -1.05
UBFD1-209ENST00000569919 TIMMDC1Q9NPL8 285 aa8.49□□□□□ -1.05
UBFD1-209ENST00000569919 BCS1LQ9Y276 419 aa8.49□□□□□ -1.05
UBFD1-209ENST00000569919 TTC21BQ7Z4L5 1316 aa8.49□□□□□ -1.05
UBFD1-209ENST00000569919 PAPPAQ13219 1627 aa8.48□□□□□ -1.05
UBFD1-209ENST00000569919 ATP4AP20648 1035 aa8.48□□□□□ -1.05
UBFD1-209ENST00000569919 RBM25P49756 843 aaKnown RBP8.48□□□□□ -1.05
UBFD1-209ENST00000569919 BICDL1Q6ZP65 573 aa8.48□□□□□ -1.05
UBFD1-209ENST00000569919 NPAS4Q8IUM7 802 aa8.48□□□□□ -1.05
UBFD1-209ENST00000569919 ZNF526Q8TF50 670 aaPredicted RBP8.48□□□□□ -1.05
UBFD1-209ENST00000569919 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
UBFD1-209ENST00000569919 RBCK1Q9BYM8 510 aa8.48□□□□□ -1.05
UBFD1-209ENST00000569919 NHSQ6T4R5 1651 aa8.48□□□□□ -1.05
UBFD1-209ENST00000569919 EVC2Q86UK5 1308 aa8.48□□□□□ -1.05
UBFD1-209ENST00000569919 WNK3Q9BYP7 1800 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 COL24A1Q17RW2 1714 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 CEP350Q5VT06 3117 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 MSX1P28360 303 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 ZAP70P43403 619 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 COL23A1Q86Y22 540 aaPredicted RBP8.47□□□□□ -1.05
UBFD1-209ENST00000569919 TREML1Q86YW5 311 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 DNAJC5GQ8N7S2 189 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 FLAD1Q8NFF5 587 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 DDX54Q8TDD1 881 aaKnown RBP8.47□□□□□ -1.05
UBFD1-209ENST00000569919 SUSD3Q96L08 255 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 DNMT3LQ9UJW3 386 aa8.47□□□□□ -1.05
UBFD1-209ENST00000569919 RGPD5Q99666 1765 aa8.46□□□□□ -1.05
UBFD1-209ENST00000569919 A0A1B0GTH6 734 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 ST8SIA5O15466 376 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 KCNQ4P56696 695 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 LAPTM4AQ15012 233 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 HIF1AQ16665 826 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 ARSJQ5FYB0 599 aaPredicted RBP8.46□□□□□ -1.06
UBFD1-209ENST00000569919 TMC7Q7Z402 723 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 RGL4Q8IZJ4 473 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 ZNF280CQ8ND82 737 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 SYTL4Q96C24 671 aaPredicted RBP8.46□□□□□ -1.06
UBFD1-209ENST00000569919 ZIC5Q96T25 663 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 AAASQ9NRG9 546 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 GPC6Q9Y625 555 aaPredicted RBP8.46□□□□□ -1.06
UBFD1-209ENST00000569919 TRPM1Q7Z4N2 1603 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 QSER1Q2KHR3 1735 aa8.46□□□□□ -1.06
UBFD1-209ENST00000569919 BTAF1O14981 1849 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 ABCC6O95255 1503 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 RBM47A0AV96 593 aaKnown RBP8.45□□□□□ -1.06
UBFD1-209ENST00000569919 TGFBR3LH3BV60 316 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 TOMM70O94826 608 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 MICAL2O94851 1124 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 DNM1Q05193 864 aaKnown RBP8.45□□□□□ -1.06
UBFD1-209ENST00000569919 TMC1Q8TDI8 760 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 ANKRD24Q8TF21 1146 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 HSH2DQ96JZ2 352 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 CITED4Q96RK1 184 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 BCL2L13Q9BXK5 485 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 ATP13A2Q9NQ11 1180 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 CCNL1Q9UK58 526 aaPredicted RBP8.45□□□□□ -1.06
UBFD1-209ENST00000569919 POLIQ9UNA4 740 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 ADCY9O60503 1353 aa8.45□□□□□ -1.06
UBFD1-209ENST00000569919 UTRNP46939 3433 aa8.44□□□□□ -1.06
UBFD1-209ENST00000569919 MZF1P28698 734 aaPredicted RBP8.44□□□□□ -1.06
UBFD1-209ENST00000569919 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.44□□□□□ -1.063e-7■■□□□ 12.7
UBFD1-209ENST00000569919 EDEM1Q92611 657 aa8.44□□□□□ -1.06
UBFD1-209ENST00000569919 NEUROD4Q9HD90 331 aa8.44□□□□□ -1.06
UBFD1-209ENST00000569919 ANKIB1Q9P2G1 1089 aa8.44□□□□□ -1.06
UBFD1-209ENST00000569919 DACH1Q9UI36 760 aa8.44□□□□□ -1.06
UBFD1-209ENST00000569919 RAB3GAP2Q9H2M9 1393 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms