RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 CCDC27Q2M243 656 aa8.14□□□□□ -1.11
GDE1-204ENST00000569773 NANOS1Q8WY41 292 aaKnown RBP8.14□□□□□ -1.11
GDE1-204ENST00000569773 EDEM1Q92611 657 aa8.14□□□□□ -1.11
GDE1-204ENST00000569773 NDFIP2Q9NV92 336 aa8.14□□□□□ -1.11
GDE1-204ENST00000569773 ATP7BP35670 1465 aa8.13□□□□□ -1.11
GDE1-204ENST00000569773 H3BM21 787 aa8.13□□□□□ -1.11
GDE1-204ENST00000569773 EFSO43281 561 aa8.13□□□□□ -1.11
GDE1-204ENST00000569773 MAPTP10636 758 aaKnown RBP8.13□□□□□ -1.11
GDE1-204ENST00000569773 GRNP28799 593 aaKnown RBP8.13□□□□□ -1.11
GDE1-204ENST00000569773 TNP2Q05952 138 aa8.13□□□□□ -1.11
GDE1-204ENST00000569773 SFSWAPQ12872 951 aaKnown RBP8.13□□□□□ -1.11
GDE1-204ENST00000569773 UNC5CLQ8IV45 518 aa8.13□□□□□ -1.11
GDE1-204ENST00000569773 STRN4Q9NRL3 753 aa8.13□□□□□ -1.11
GDE1-204ENST00000569773 HCN2Q9UL51 889 aa8.13□□□□□ -1.11
GDE1-204ENST00000569773 BRPF3Q9ULD4 1205 aa8.13□□□□□ -1.11
GDE1-204ENST00000569773 POLIQ9UNA4 740 aa8.13□□□□□ -1.11
GDE1-204ENST00000569773 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
GDE1-204ENST00000569773 ARHGEF10O15013 1369 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 THSD7AQ9UPZ6 1657 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 NDUFB5O43674 189 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 PDGFAP04085 211 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 EPB42P16452 691 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 MAPK1P28482 360 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 MZF1P28698 734 aaPredicted RBP8.12□□□□□ -1.11
GDE1-204ENST00000569773 MARSP56192 900 aaKnown RBP8.12□□□□□ -1.11
GDE1-204ENST00000569773 SAFB2Q14151 953 aaKnown RBP eCLIP8.12□□□□□ -1.11
GDE1-204ENST00000569773 FOXR1Q6PIV2 292 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 CMTR1Q8N1G2 835 aaKnown RBP8.12□□□□□ -1.11
GDE1-204ENST00000569773 PIK3R5Q8WYR1 880 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 NUDT16Q96DE0 195 aaKnown RBP8.12□□□□□ -1.11
GDE1-204ENST00000569773 TRERF1Q96PN7 1200 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 FAM13BQ9NYF5 915 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 DCTN4Q9UJW0 460 aa8.12□□□□□ -1.11
GDE1-204ENST00000569773 ATXN7L1Q9ULK2 861 aaPredicted RBP8.12□□□□□ -1.11
GDE1-204ENST00000569773 CD33P20138 364 aa8.11□□□□□ -1.11
GDE1-204ENST00000569773 MFAP1P55081 439 aaKnown RBP8.11□□□□□ -1.11
GDE1-204ENST00000569773 GRIN2CQ14957 1233 aa8.11□□□□□ -1.11
GDE1-204ENST00000569773 VPS72Q15906 364 aa8.11□□□□□ -1.11
GDE1-204ENST00000569773 PHF24Q9UPV7 400 aa8.11□□□□□ -1.11
GDE1-204ENST00000569773 KCNH4Q9UQ05 1017 aa8.11□□□□□ -1.11
GDE1-204ENST00000569773 TNS1Q9HBL0 1735 aaKnown RBP8.11□□□□□ -1.11
GDE1-204ENST00000569773 FGFR3P22607 806 aa8.1□□□□□ -1.11
GDE1-204ENST00000569773 TRIP4Q15650 581 aaPredicted RBP8.1□□□□□ -1.11
GDE1-204ENST00000569773 GPR161Q8N6U8 529 aaKnown RBP8.1□□□□□ -1.11
GDE1-204ENST00000569773 PMFBP1Q8TBY8 1022 aa8.1□□□□□ -1.11
GDE1-204ENST00000569773 DCAF11Q8TEB1 546 aa8.1□□□□□ -1.11
GDE1-204ENST00000569773 HIRIP3Q9BW71 556 aaPredicted RBP8.1□□□□□ -1.11
GDE1-204ENST00000569773 CFHR5Q9BXR6 569 aa8.1□□□□□ -1.11
GDE1-204ENST00000569773 MARK1Q9P0L2 795 aa8.1□□□□□ -1.11
GDE1-204ENST00000569773 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
GDE1-204ENST00000569773 RGPD1P0DJD0 1748 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 CEP350Q5VT06 3117 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 FAM83GA6ND36 823 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 PCSK2P16519 638 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 KCNQ4P56696 695 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 LAMC2Q13753 1193 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 C8orf34Q49A92 452 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 IRF7Q92985 503 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 POGKQ9P215 609 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 KCNMB2Q9Y691 235 aa8.09□□□□□ -1.11
GDE1-204ENST00000569773 BLMP54132 1417 aaPredicted RBP8.09□□□□□ -1.11
GDE1-204ENST00000569773 EIF3AQ14152 1382 aaKnown RBP8.09□□□□□ -1.12
GDE1-204ENST00000569773 LMO7Q8WWI1 1683 aa8.08□□□□□ -1.12
GDE1-204ENST00000569773 QRICH2Q9H0J4 1663 aa8.08□□□□□ -1.12
GDE1-204ENST00000569773 ERBB4Q15303 1308 aa8.08□□□□□ -1.12
GDE1-204ENST00000569773 A6NHS1 94 aa8.08□□□□□ -1.12
GDE1-204ENST00000569773 CTBSQ01459 385 aa8.08□□□□□ -1.12
GDE1-204ENST00000569773 TMC1Q8TDI8 760 aa8.08□□□□□ -1.12
GDE1-204ENST00000569773 RBCK1Q9BYM8 510 aa8.08□□□□□ -1.12
GDE1-204ENST00000569773 GGNBP2Q9H3C7 697 aa8.08□□□□□ -1.12
GDE1-204ENST00000569773 NRKQ7Z2Y5 1582 aa8.08□□□□□ -1.12
GDE1-204ENST00000569773 POLR3AO14802 1390 aaPredicted RBP8.08□□□□□ -1.12
GDE1-204ENST00000569773 LRP5O75197 1615 aa8.07□□□□□ -1.12
GDE1-204ENST00000569773 XYLBO75191 536 aa8.07□□□□□ -1.12
GDE1-204ENST00000569773 VSIG8P0DPA2 414 aa8.07□□□□□ -1.12
GDE1-204ENST00000569773 USP5P45974 858 aa8.07□□□□□ -1.12
GDE1-204ENST00000569773 GAS6Q14393 721 aa8.07□□□□□ -1.12
GDE1-204ENST00000569773 TMC7Q7Z402 723 aa8.07□□□□□ -1.12
GDE1-204ENST00000569773 GJD3Q8N144 294 aa8.07□□□□□ -1.12
GDE1-204ENST00000569773 TTC16Q8NEE8 873 aa8.07□□□□□ -1.12
GDE1-204ENST00000569773 CCDC9Q9Y3X0 531 aaKnown RBP8.07□□□□□ -1.12
GDE1-204ENST00000569773 TRPM1Q7Z4N2 1603 aa8.07□□□□□ -1.12
GDE1-204ENST00000569773 SPEM2Q0P670 501 aa8.06□□□□□ -1.12
GDE1-204ENST00000569773 DNAJC14Q6Y2X3 702 aaPredicted RBP8.06□□□□□ -1.12
GDE1-204ENST00000569773 KRT25Q7Z3Z0 450 aa8.06□□□□□ -1.12
GDE1-204ENST00000569773 RAB44Q7Z6P3 723 aaPredicted RBP8.06□□□□□ -1.12
GDE1-204ENST00000569773 ASB16Q96NS5 453 aa8.06□□□□□ -1.12
GDE1-204ENST00000569773 CITED4Q96RK1 184 aa8.06□□□□□ -1.12
GDE1-204ENST00000569773 FAM129BQ96TA1 746 aa8.06□□□□□ -1.12
GDE1-204ENST00000569773 SLC30A3Q99726 388 aa8.06□□□□□ -1.12
GDE1-204ENST00000569773 FNDC3AQ9Y2H6 1198 aaKnown RBP8.06□□□□□ -1.12
GDE1-204ENST00000569773 GPRASP1Q5JY77 1395 aa8.06□□□□□ -1.12
GDE1-204ENST00000569773 SBF2Q86WG5 1849 aa8.06□□□□□ -1.12
GDE1-204ENST00000569773 COL18A1P39060 1754 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 AKAP12Q02952 1782 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 GPR182O15218 404 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 RPLP1P05386 114 aaKnown RBP8.05□□□□□ -1.12
GDE1-204ENST00000569773 MX2P20592 715 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 CCINQ13939 588 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 FAM182BQ5T319 152 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms