RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 LINC00301Q8NCQ3 95 aa9.31□□□□□ -0.92
SPG7-220ENST00000569363 CCDC150Q8NCX0 1101 aa9.31□□□□□ -0.92
SPG7-220ENST00000569363 CCDC112Q8NEF3 446 aa9.31□□□□□ -0.92
SPG7-220ENST00000569363 CACTINQ8WUQ7 758 aaKnown RBP9.31□□□□□ -0.92
SPG7-220ENST00000569363 TMEM87BQ96K49 555 aa9.31□□□□□ -0.92
SPG7-220ENST00000569363 PUS3Q9BZE2 481 aaKnown RBP9.31□□□□□ -0.92
SPG7-220ENST00000569363 TMOD3Q9NYL9 352 aa9.31□□□□□ -0.92
SPG7-220ENST00000569363 NHSL1Q5SYE7 1610 aa9.31□□□□□ -0.92
SPG7-220ENST00000569363 ZMYM6O95789 1325 aa9.31□□□□□ -0.92
SPG7-220ENST00000569363 ANKRD18BA2A2Z9 1011 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 GPAA1O43292 621 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 CCP110O43303 1012 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 SLC3A2P08195 630 aaKnown RBP9.3□□□□□ -0.92
SPG7-220ENST00000569363 FOSBP53539 338 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 LRMPQ12912 555 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 UBE3CQ15386 1083 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 ALX1Q15699 326 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 METTL24Q5JXM2 366 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 ANO1Q5XXA6 986 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 TTLL5Q6EMB2 1281 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 ZNF710Q8N1W2 664 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 DDX17Q92841 729 aaKnown RBP9.3□□□□□ -0.92
SPG7-220ENST00000569363 FEZ1Q99689 392 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 OSBPL5Q9H0X9 879 aaPredicted RBP9.3□□□□□ -0.92
SPG7-220ENST00000569363 KIAA1468Q9P260 1216 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 CGNQ9P2M7 1197 aaKnown RBP9.3□□□□□ -0.92
SPG7-220ENST00000569363 NRBP1Q9UHY1 535 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 TBC1D2BQ9UPU7 963 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 MAP3K15Q6ZN16 1313 aa9.3□□□□□ -0.92
SPG7-220ENST00000569363 DDX60Q8IY21 1712 aaKnown RBP9.29□□□□□ -0.92
SPG7-220ENST00000569363 CCDC69A6NI79 296 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 IKBKBO14920 756 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 CBFA2T2O43439 604 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 PPP6R2O75170 966 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 SKILP12757 684 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 ADORA1P30542 326 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 ADD2P35612 726 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 ZAP70P43403 619 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 GUCY1B3Q02153 619 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 KIF23Q02241 960 aaPredicted RBP9.29□□□□□ -0.92
SPG7-220ENST00000569363 TRIM29Q14134 588 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 CCDC144BQ3MJ40 725 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 GIGYF2Q6Y7W6 1299 aaKnown RBP9.29□□□□□ -0.92
SPG7-220ENST00000569363 CCDC144CPQ8IYA2 1237 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 AOPEPQ8N6M6 819 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 WASF1Q92558 559 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 AK7Q96M32 723 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 NOL10Q9BSC4 688 aaKnown RBP9.29□□□□□ -0.92
SPG7-220ENST00000569363 ZMYND15Q9H091 742 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 ANGEL1Q9UNK9 670 aaKnown RBP9.29□□□□□ -0.92
SPG7-220ENST00000569363 HPS5Q9UPZ3 1129 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 RIPOR2Q9Y4F9 1068 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 RIC1Q4ADV7 1423 aa9.29□□□□□ -0.92
SPG7-220ENST00000569363 SOS2Q07890 1332 aaPredicted RBP9.29□□□□□ -0.92
SPG7-220ENST00000569363 PHLPP1O60346 1717 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 NWD2Q9ULI1 1742 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 FAM237AA0A1B0GTK4 181 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 SH2B2O14492 632 aaPredicted RBP9.28□□□□□ -0.92
SPG7-220ENST00000569363 FOXP2O15409 715 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 METAP2P50579 478 aaKnown RBP eCLIP9.28□□□□□ -0.92
SPG7-220ENST00000569363 NDUFA8P51970 172 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 ANTXR2P58335 489 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 EVA1CP58658 441 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 HAND2P61296 217 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 GNL2Q13823 731 aaKnown RBP9.28□□□□□ -0.92
SPG7-220ENST00000569363 SLC39A14Q15043 492 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 PTPN14Q15678 1187 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 SLFNL1Q499Z3 407 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 LDHAL6AQ6ZMR3 332 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 BRINP3Q76B58 766 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 CHST3Q7LGC8 479 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 ELOA2Q8IYF1 753 aaPredicted RBP9.28□□□□□ -0.92
SPG7-220ENST00000569363 C16orf45Q96MC5 204 aaPredicted RBP9.28□□□□□ -0.92
SPG7-220ENST00000569363 MTA3Q9BTC8 594 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 FTOQ9C0B1 505 aaKnown RBP eCLIP9.28□□□□□ -0.92
SPG7-220ENST00000569363 CNNM2Q9H8M5 875 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 CNNM1Q9NRU3 951 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 HOOK1Q9UJC3 728 aaKnown RBP9.28□□□□□ -0.92
SPG7-220ENST00000569363 CLIC4Q9Y696 253 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 MROH5Q6ZUA9 1318 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 STK36Q9NRP7 1315 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 SHANK3Q9BYB0 1731 aa9.28□□□□□ -0.92
SPG7-220ENST00000569363 A0A0G2JLW4 131 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 A0A1B0GVL5 298 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 PSDA5PKW4 1024 aaPredicted RBP9.27□□□□□ -0.93
SPG7-220ENST00000569363 CUTAO60888 179 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 ZNF202O95125 648 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 ARID4AP29374 1257 aaPredicted RBP9.27□□□□□ -0.93
SPG7-220ENST00000569363 CTSWP56202 376 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 CCZ1BP86790 482 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 CCZ1P86791 482 aaPredicted RBP9.27□□□□□ -0.93
SPG7-220ENST00000569363 PPP4R3BQ5MIZ7 849 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 UTP14CQ5TAP6 766 aaKnown RBP9.27□□□□□ -0.93
SPG7-220ENST00000569363 NYAP1Q6ZVC0 841 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 NLRP10Q86W26 655 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 KIF18AQ8NI77 898 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 ALG1Q9BT22 464 aa9.27□□□□□ -0.93
SPG7-220ENST00000569363 PUS7LQ9H0K6 701 aaKnown RBP9.27□□□□□ -0.93
SPG7-220ENST00000569363 C4AP0C0L4 1744 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms