RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 NOP58Q9Y2X3 529 aaKnown RBP12.1□□□□□ -0.47
CLN6-209ENST00000569336 NAV1Q8NEY1 1877 aa12.1□□□□□ -0.47
CLN6-209ENST00000569336 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 ADM5C9JUS6 153 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 PHKA1P46020 1223 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 RBM5P52756 815 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLN6-209ENST00000569336 RRP1P56182 461 aaKnown RBP12.09□□□□□ -0.47
CLN6-209ENST00000569336 HDLBPQ00341 1268 aaKnown RBP12.09□□□□□ -0.47
CLN6-209ENST00000569336 CFAP100Q494V2 611 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 CCDC102BQ68D86 513 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 USP48Q86UV5 1035 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 TEKT1Q969V4 418 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 XAGE2Q96GT9 111 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 NEUROD6Q96NK8 337 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 ZNF408Q9H9D4 720 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 ASTN2O75129 1339 aaPredicted RBP12.09□□□□□ -0.47
CLN6-209ENST00000569336 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
CLN6-209ENST00000569336 DOCK1Q14185 1865 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 ADORA1P30542 326 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 NF2P35240 595 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 LBX1P52954 281 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 TIMM10P62072 90 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 TNFAIP1Q13829 316 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 CDCA5Q96FF9 252 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
CLN6-209ENST00000569336 PPP2R3BQ9Y5P8 575 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 TLL2Q9Y6L7 1015 aa12.08□□□□□ -0.48
CLN6-209ENST00000569336 PTPRFP10586 1907 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 UQCRFS1P1P0C7P4 283 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 ECE1P42892 770 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 CRKP46108 304 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 RASGRF1Q13972 1273 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 TNNI3KQ59H18 835 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 C20orf194Q5TEA3 1177 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 CST9Q5W186 159 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 C2orf69Q8N8R5 385 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 HHIPL1Q96JK4 782 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 FPGT-TNNI3KV9GXZ4 949 aa12.07□□□□□ -0.48
CLN6-209ENST00000569336 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
CLN6-209ENST00000569336 ARID4AP29374 1257 aaPredicted RBP12.06□□□□□ -0.48
CLN6-209ENST00000569336 FKBP1BP68106 108 aa12.06□□□□□ -0.48
CLN6-209ENST00000569336 FMR1Q06787 632 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLN6-209ENST00000569336 DEFB115Q30KQ5 88 aa12.06□□□□□ -0.48
CLN6-209ENST00000569336 CCDC158Q5M9N0 1113 aa12.06□□□□□ -0.48
CLN6-209ENST00000569336 SPTY2D1Q68D10 685 aaPredicted RBP12.06□□□□□ -0.48
CLN6-209ENST00000569336 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
CLN6-209ENST00000569336 SAPCD2Q86UD0 394 aa12.06□□□□□ -0.48
CLN6-209ENST00000569336 SLF2Q8IX21 1173 aa12.06□□□□□ -0.48
CLN6-209ENST00000569336 MRIQ9BWK5 157 aa12.06□□□□□ -0.48
CLN6-209ENST00000569336 GBA2Q9HCG7 927 aaPredicted RBP12.06□□□□□ -0.48
CLN6-209ENST00000569336 TMOD2Q9NZR1 351 aa12.06□□□□□ -0.48
CLN6-209ENST00000569336 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
CLN6-209ENST00000569336 BAZ2AQ9UIF9 1905 aaKnown RBP12.05□□□□□ -0.48
CLN6-209ENST00000569336 TNNI2P48788 182 aa12.05□□□□□ -0.48
CLN6-209ENST00000569336 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
CLN6-209ENST00000569336 TTC39AQ5SRH9 613 aa12.05□□□□□ -0.48
CLN6-209ENST00000569336 HHIPL2Q6UWX4 724 aa12.05□□□□□ -0.48
CLN6-209ENST00000569336 DZIP1Q86YF9 867 aaKnown RBP12.05□□□□□ -0.48
CLN6-209ENST00000569336 KIF1BPQ96EK5 621 aa12.05□□□□□ -0.48
CLN6-209ENST00000569336 ZDHHC15Q96MV8 337 aa12.05□□□□□ -0.48
CLN6-209ENST00000569336 VEZTQ9HBM0 779 aa12.05□□□□□ -0.48
CLN6-209ENST00000569336 RAB11FIP3O75154 756 aa12.04□□□□□ -0.48
CLN6-209ENST00000569336 HUNKP57058 714 aa12.04□□□□□ -0.48
CLN6-209ENST00000569336 SPATA5Q8NB90 893 aa12.04□□□□□ -0.48
CLN6-209ENST00000569336 PRMT6Q96LA8 375 aaPredicted RBP12.04□□□□□ -0.48
CLN6-209ENST00000569336 DEFB129Q9H1M3 183 aa12.04□□□□□ -0.48
CLN6-209ENST00000569336 CASP8AP2Q9UKL3 1982 aa12.04□□□□□ -0.48
CLN6-209ENST00000569336 RPAP1Q9BWH6 1393 aaPredicted RBP12.04□□□□□ -0.48
CLN6-209ENST00000569336 DDX60LQ5H9U9 1706 aaKnown RBP12.03□□□□□ -0.48
CLN6-209ENST00000569336 SIPA1L1O43166 1804 aa12.03□□□□□ -0.48
CLN6-209ENST00000569336 PHIPQ8WWQ0 1821 aa12.03□□□□□ -0.48
CLN6-209ENST00000569336 CLRN2A0PK11 232 aa12.03□□□□□ -0.48
CLN6-209ENST00000569336 PRDX5P30044 214 aa12.03□□□□□ -0.48
CLN6-209ENST00000569336 GRIK5Q16478 980 aa12.03□□□□□ -0.48
CLN6-209ENST00000569336 CLASRPQ8N2M8 674 aaKnown RBP12.03□□□□□ -0.48
CLN6-209ENST00000569336 ZNF512BQ96KM6 892 aaPredicted RBP12.03□□□□□ -0.48
CLN6-209ENST00000569336 CAPNS2Q96L46 248 aa12.03□□□□□ -0.48
CLN6-209ENST00000569336 TDRD3Q9H7E2 651 aaKnown RBP12.03□□□□□ -0.48
CLN6-209ENST00000569336 ABCF2Q9UG63 623 aa12.03□□□□□ -0.48
CLN6-209ENST00000569336 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.03□□□□□ -0.48
CLN6-209ENST00000569336 SSC5DA1L4H1 1573 aa12.03□□□□□ -0.48
CLN6-209ENST00000569336 WDR33Q9C0J8 1336 aaKnown RBP12.03□□□□□ -0.48
CLN6-209ENST00000569336 IGSF3O75054 1194 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 VEGFBP49765 207 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 AAMPQ13685 434 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.49
CLN6-209ENST00000569336 SUPT20HL1Q3ZLR7 823 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 FKBP1CQ5VVH2 108 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 ERICH6Q7L0X2 663 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 AACSQ86V21 672 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 SIRT2Q8IXJ6 389 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 RHPN1Q8TCX5 695 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 DBNDD2Q9BQY9 259 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 ZNF70Q9UC06 446 aaPredicted RBP12.02□□□□□ -0.49
CLN6-209ENST00000569336 DBNLQ9UJU6 430 aaKnown RBP12.02□□□□□ -0.49
CLN6-209ENST00000569336 PCDHAC2Q9Y5I4 1007 aa12.02□□□□□ -0.49
CLN6-209ENST00000569336 APBB1O00213 710 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms