RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 F8W031 263 aaPredicted RBP14.21□□□□□ -0.13
CHRFAM7A-206ENST00000569278 GABBR2O75899 941 aa14.21□□□□□ -0.13
CHRFAM7A-206ENST00000569278 CFAP100Q494V2 611 aa14.21□□□□□ -0.13
CHRFAM7A-206ENST00000569278 NBPF12Q5TAG4 269 aaPredicted RBP14.21□□□□□ -0.13
CHRFAM7A-206ENST00000569278 KAZALD1Q96I82 304 aa14.21□□□□□ -0.13
CHRFAM7A-206ENST00000569278 ZNF594Q96JF6 807 aaPredicted RBP14.21□□□□□ -0.13
CHRFAM7A-206ENST00000569278 PTPN18Q99952 460 aa14.21□□□□□ -0.13
CHRFAM7A-206ENST00000569278 ANKRD18BA2A2Z9 1011 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 ZBTB48P10074 688 aaPredicted RBP14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 FKBP1AP62942 108 aaKnown RBP14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 DLGAP5Q15398 846 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 GRIK5Q16478 980 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 OTOP1Q7RTM1 612 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 CHMP4AQ9BY43 222 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 MYH16Q9H6N6 1097 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 PCDH10Q9P2E7 1040 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 PPP2R3BQ9Y5P8 575 aa14.2□□□□□ -0.14
CHRFAM7A-206ENST00000569278 ZBED9Q6R2W3 1325 aa14.19□□□□□ -0.14
CHRFAM7A-206ENST00000569278 RANBP2P49792 3224 aaKnown RBP14.19□□□□□ -0.14
CHRFAM7A-206ENST00000569278 MANSC4A6NHS7 340 aaPredicted RBP14.19□□□□□ -0.14
CHRFAM7A-206ENST00000569278 USP2O75604 605 aaPredicted RBP14.19□□□□□ -0.14
CHRFAM7A-206ENST00000569278 KCNJ4P48050 445 aa14.19□□□□□ -0.14
CHRFAM7A-206ENST00000569278 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
CHRFAM7A-206ENST00000569278 ERICH6BQ5W0A0 696 aa14.19□□□□□ -0.14
CHRFAM7A-206ENST00000569278 MS4A3Q96HJ5 214 aa14.19□□□□□ -0.14
CHRFAM7A-206ENST00000569278 TEPSINQ96N21 525 aa14.19□□□□□ -0.14
CHRFAM7A-206ENST00000569278 FAM205AQ6ZU69 1335 aa14.18□□□□□ -0.14
CHRFAM7A-206ENST00000569278 KIAA0100Q14667 2235 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-206ENST00000569278 EXOSC9Q06265 439 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-206ENST00000569278 CRHR2Q13324 411 aa14.18□□□□□ -0.14
CHRFAM7A-206ENST00000569278 LMBR1LQ6UX01 489 aa14.18□□□□□ -0.14
CHRFAM7A-206ENST00000569278 TESPA1A2RU30 521 aaPredicted RBP14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 GALR2O43603 387 aaPredicted RBP14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 CLCN6P51797 869 aa14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 IFIT5Q13325 482 aaKnown RBP14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 RASA3Q14644 834 aa14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 ZNF804AQ7Z570 1209 aa14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 FAM9BQ8IZU0 186 aa14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 MS4A4AQ96JQ5 239 aa14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 PUS3Q9BZE2 481 aaKnown RBP14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 VEZTQ9HBM0 779 aa14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 TRIM17Q9Y577 477 aa14.17□□□□□ -0.14
CHRFAM7A-206ENST00000569278 GRM8O00222 908 aa14.16□□□□□ -0.14
CHRFAM7A-206ENST00000569278 ALDH1A1P00352 501 aa14.16□□□□□ -0.14
CHRFAM7A-206ENST00000569278 GYG1P46976 350 aa14.16□□□□□ -0.14
CHRFAM7A-206ENST00000569278 TDRD7Q8NHU6 1098 aaKnown RBP14.16□□□□□ -0.14
CHRFAM7A-206ENST00000569278 CD99L2Q8TCZ2 262 aa14.16□□□□□ -0.14
CHRFAM7A-206ENST00000569278 SLC10A4Q96EP9 437 aa14.16□□□□□ -0.14
CHRFAM7A-206ENST00000569278 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-206ENST00000569278 ARMC5Q96C12 935 aa14.15□□□□□ -0.14
CHRFAM7A-206ENST00000569278 SUCLG2Q96I99 432 aa14.15□□□□□ -0.14
CHRFAM7A-206ENST00000569278 FAM84BQ96KN1 310 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-206ENST00000569278 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-206ENST00000569278 ZNF70Q9UC06 446 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-206ENST00000569278 PCDHB8Q9UN66 801 aa14.15□□□□□ -0.14
CHRFAM7A-206ENST00000569278 CHMP3Q9Y3E7 222 aa14.15□□□□□ -0.14
CHRFAM7A-206ENST00000569278 UNCXA6NJT0 531 aa14.14□□□□□ -0.15
CHRFAM7A-206ENST00000569278 MFSD14BQ5SR56 506 aa14.14□□□□□ -0.15
CHRFAM7A-206ENST00000569278 BRI3BPQ8WY22 251 aa14.14□□□□□ -0.15
CHRFAM7A-206ENST00000569278 RNF25Q96BH1 459 aaPredicted RBP14.14□□□□□ -0.15
CHRFAM7A-206ENST00000569278 TDRD3Q9H7E2 651 aaKnown RBP14.14□□□□□ -0.15
CHRFAM7A-206ENST00000569278 ELP3Q9H9T3 547 aa14.14□□□□□ -0.15
CHRFAM7A-206ENST00000569278 PTPN22Q9Y2R2 807 aa14.14□□□□□ -0.15
CHRFAM7A-206ENST00000569278 PPP1R12BO60237 982 aaPredicted RBP14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 NEFLP07196 543 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 INHBEP58166 350 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 VGLL4Q14135 290 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 LDHAL6AQ6ZMR3 332 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 WDR63Q8IWG1 891 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 ANKRD13AQ8IZ07 590 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 ANKRD44Q8N8A2 993 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 VGLL2Q8N8G2 317 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 OPTNQ96CV9 577 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 TMEM39BQ9GZU3 492 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 SERPINA10Q9UK55 444 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 TTF2Q9UNY4 1162 aaKnown RBP14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 RIPOR2Q9Y4F9 1068 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 UTYO14607 1347 aa14.13□□□□□ -0.15
CHRFAM7A-206ENST00000569278 PLIN1O60240 522 aa14.12□□□□□ -0.15
CHRFAM7A-206ENST00000569278 NBPF7P0C2Y1 421 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-206ENST00000569278 IREB2P48200 963 aaKnown RBP14.12□□□□□ -0.15
CHRFAM7A-206ENST00000569278 SUPT20HL1Q3ZLR7 823 aa14.12□□□□□ -0.15
CHRFAM7A-206ENST00000569278 DZIP1LQ8IYY4 767 aaKnown RBP14.12□□□□□ -0.15
CHRFAM7A-206ENST00000569278 LAMA3Q16787 3333 aa14.12□□□□□ -0.15
CHRFAM7A-206ENST00000569278 MYO1BO43795 1136 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 CRKP46108 304 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 CACNB3P54284 484 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 UBE4AQ14139 1066 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 CCDC57Q2TAC2 916 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 RABL6Q3YEC7 729 aaPredicted RBP14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 FBXO33Q7Z6M2 555 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 FAM43AQ8N2R8 423 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 CNNM1Q9NRU3 951 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 SNCAIPQ9Y6H5 919 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 ZNF521Q96K83 1311 aa14.11□□□□□ -0.15
CHRFAM7A-206ENST00000569278 MYH13Q9UKX3 1938 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms