RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 CXorf56Q9H5V9 222 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 TXLNGQ9NUQ3 528 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 WWC3Q9ULE0 1092 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 UTP11Q9Y3A2 253 aaKnown RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 TROVE2P10155 538 aaKnown RBP eCLIP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 HMGB2P26583 209 aaKnown RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 LONRF2Q1L5Z9 754 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 IQCA1Q86XH1 822 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 NCOA7Q8NI08 942 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 CNNM2Q9H8M5 875 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 CTDP1Q9Y5B0 961 aaPredicted RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 PCDHB15Q9Y5E8 787 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 TEX11Q8IYF3 940 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 TMEM87AQ8NBN3 555 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 NEK11Q8NG66 645 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 SECISBP2LQ93073 1101 aaKnown RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 MAML3Q96JK9 1138 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 ANTXR1Q9H6X2 564 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 ZBTB40Q9NUA8 1239 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 CYP2C19P33261 490 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 UBA7P41226 1012 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 LIG3P49916 1009 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 EIF3BP55884 814 aaKnown RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 PUF60Q9UHX1 559 aaKnown RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 PTPN23Q9H3S7 1636 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 EIF2AK4Q9P2K8 1649 aaKnown RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 TOP2BQ02880 1626 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 ALDH1L1O75891 902 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 AEBP2Q6ZN18 517 aaPredicted RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 FNBP4Q8N3X1 1017 aaPredicted RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 TEX9Q8N6V9 391 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 WHAMMQ8TF30 809 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 PAIP2BQ9ULR5 123 aaKnown RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 A0A0G2JS52 829 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 IKBKBO14920 756 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 RAD51AP2Q09MP3 1159 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 EMBQ6PCB8 327 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 SARM1Q6SZW1 724 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 EXOC1Q9NV70 894 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 GOLGA8QA0A0J9YX86 632 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 GOLGA8OA6NCC3 632 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 GOLGA8NF8WBI6 632 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 PRC1O43663 620 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 GNAQP50148 359 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 IRX5P78411 483 aaPredicted RBP7.97□□□□□ -1.13
CNOT1-216ENST00000569240 CRYMQ14894 314 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 SLC12A7Q9Y666 1083 aa7.97□□□□□ -1.13
CNOT1-216ENST00000569240 GOLGA8BA8MQT2 603 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 PNMA6AP0CW24 399 aaPredicted RBP7.96□□□□□ -1.13
CNOT1-216ENST00000569240 RFC1P35251 1148 aaPredicted RBP7.96□□□□□ -1.13
CNOT1-216ENST00000569240 SLC4A8Q2Y0W8 1093 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 VPS52Q8N1B4 723 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 ZC3H15Q8WU90 426 aaKnown RBP7.96□□□□□ -1.13
CNOT1-216ENST00000569240 STAMBPL1Q96FJ0 436 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 NAP1L4Q99733 375 aaKnown RBP7.96□□□□□ -1.13
CNOT1-216ENST00000569240 NUF2Q9BZD4 464 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 VIPAS39Q9H9C1 493 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 NSD3Q9BZ95 1437 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 CUTAO60888 179 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 RNF8O76064 485 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 PPP1R7Q15435 360 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 GLE1Q53GS7 698 aaKnown RBP7.96□□□□□ -1.13
CNOT1-216ENST00000569240 IQUBQ8NA54 791 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 DONSONQ9NYP3 566 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 USP16Q9Y5T5 823 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 CFTRP13569 1480 aa7.96□□□□□ -1.13
CNOT1-216ENST00000569240 PIK3R4Q99570 1358 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 E7EVH7 732 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 HNRNPCL1O60812 293 aaKnown RBP7.96□□□□□ -1.14
CNOT1-216ENST00000569240 PLCB4Q15147 1175 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 LGSNQ5TDP6 509 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 CCDC194A0A1B0GVG4 234 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 LMOD1P29536 600 aaPredicted RBP7.96□□□□□ -1.14
CNOT1-216ENST00000569240 RILPL1Q5EBL4 403 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 IGSF22Q8N9C0 903 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 GUCA1BQ9UMX6 200 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 GOLGA8AA7E2F4 631 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 CALM1P0DP23 149 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 CALM2P0DP24 149 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 CALM3P0DP25 149 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 CALML3P27482 149 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 GTF2E1P29083 439 aaPredicted RBP7.96□□□□□ -1.14
CNOT1-216ENST00000569240 C3orf20Q8ND61 904 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 MPHOSPH6Q99547 160 aaKnown RBP7.96□□□□□ -1.14
CNOT1-216ENST00000569240 FGFR1OP2Q9NVK5 253 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 TMEM63CQ9P1W3 806 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 HYOU1Q9Y4L1 999 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 EIF3CLB5ME19 914 aaKnown RBP7.96□□□□□ -1.14
CNOT1-216ENST00000569240 RRAGBQ5VZM2 374 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 BBOF1Q8ND07 529 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 ZFP91Q96JP5 570 aaPredicted RBP7.96□□□□□ -1.14
CNOT1-216ENST00000569240 EIF3CQ99613 913 aaKnown RBP7.96□□□□□ -1.14
CNOT1-216ENST00000569240 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.96□□□□□ -1.14
CNOT1-216ENST00000569240 STK24Q9Y6E0 443 aa7.96□□□□□ -1.14
CNOT1-216ENST00000569240 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT1-216ENST00000569240 SEPT11Q9NVA2 429 aaKnown RBP7.95□□□□□ -1.14
CNOT1-216ENST00000569240 SRLQ86TD4 932 aa7.95□□□□□ -1.14
CNOT1-216ENST00000569240 KRI1Q8N9T8 703 aaKnown RBP7.95□□□□□ -1.14
CNOT1-216ENST00000569240 HAUS1Q96CS2 278 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms