RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 SSH1Q8WYL5 1049 aa17.15■□□□□ 0.34
CNOT1-215ENST00000569020 CLMNQ96JQ2 1002 aa17.15■□□□□ 0.34
CNOT1-215ENST00000569020 AOX1Q06278 1338 aa17.15■□□□□ 0.34
CNOT1-215ENST00000569020 CRKP46108 304 aa17.14■□□□□ 0.33
CNOT1-215ENST00000569020 FBXO33Q7Z6M2 555 aa17.14■□□□□ 0.33
CNOT1-215ENST00000569020 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
CNOT1-215ENST00000569020 IQSEC3Q9UPP2 1182 aaPredicted RBP17.14■□□□□ 0.33
CNOT1-215ENST00000569020 SLFN5Q08AF3 891 aa17.13■□□□□ 0.33
CNOT1-215ENST00000569020 CHAF1AQ13111 956 aaPredicted RBP17.13■□□□□ 0.33
CNOT1-215ENST00000569020 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
CNOT1-215ENST00000569020 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
CNOT1-215ENST00000569020 VGLL2Q8N8G2 317 aa17.13■□□□□ 0.33
CNOT1-215ENST00000569020 USP44Q9H0E7 712 aa17.13■□□□□ 0.33
CNOT1-215ENST00000569020 TCP10L2B9ZVM9 353 aa17.12■□□□□ 0.33
CNOT1-215ENST00000569020 IFIT1P09914 478 aaKnown RBP17.12■□□□□ 0.33
CNOT1-215ENST00000569020 HDLBPQ00341 1268 aaKnown RBP17.12■□□□□ 0.33
CNOT1-215ENST00000569020 FBXO46Q6PJ61 603 aaPredicted RBP17.12■□□□□ 0.33
CNOT1-215ENST00000569020 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
CNOT1-215ENST00000569020 R3HDMLQ9H3Y0 253 aa17.12■□□□□ 0.33
CNOT1-215ENST00000569020 IGF2BP3O00425 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
CNOT1-215ENST00000569020 PUM3Q15397 648 aaKnown RBP17.11■□□□□ 0.33
CNOT1-215ENST00000569020 TEKT1Q969V4 418 aa17.11■□□□□ 0.33
CNOT1-215ENST00000569020 BCAMP50895 628 aa17.1■□□□□ 0.33
CNOT1-215ENST00000569020 GRIK5Q16478 980 aa17.1■□□□□ 0.33
CNOT1-215ENST00000569020 TEPSINQ96N21 525 aa17.1■□□□□ 0.33
CNOT1-215ENST00000569020 ELP3Q9H9T3 547 aa17.1■□□□□ 0.33
CNOT1-215ENST00000569020 SMC4Q9NTJ3 1288 aa17.1■□□□□ 0.33
CNOT1-215ENST00000569020 MAST3O60307 1309 aa17.1■□□□□ 0.33
CNOT1-215ENST00000569020 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
CNOT1-215ENST00000569020 GJA5P36382 358 aa17.09■□□□□ 0.33
CNOT1-215ENST00000569020 OPTNQ96CV9 577 aa17.09■□□□□ 0.33
CNOT1-215ENST00000569020 MRIQ9BWK5 157 aa17.09■□□□□ 0.33
CNOT1-215ENST00000569020 TMEM39BQ9GZU3 492 aa17.09■□□□□ 0.33
CNOT1-215ENST00000569020 TMOD2Q9NZR1 351 aa17.09■□□□□ 0.33
CNOT1-215ENST00000569020 EYA2O00167 538 aa17.08■□□□□ 0.32
CNOT1-215ENST00000569020 SLC5A1P13866 664 aa17.08■□□□□ 0.32
CNOT1-215ENST00000569020 FGFR2P21802 821 aa17.08■□□□□ 0.32
CNOT1-215ENST00000569020 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.32
CNOT1-215ENST00000569020 SUGT1Q9Y2Z0 365 aa17.08■□□□□ 0.32
CNOT1-215ENST00000569020 TRIM17Q9Y577 477 aa17.08■□□□□ 0.32
CNOT1-215ENST00000569020 CSADQ9Y600 493 aa17.08■□□□□ 0.32
CNOT1-215ENST00000569020 AK9Q5TCS8 1911 aa17.08■□□□□ 0.32
CNOT1-215ENST00000569020 TESPA1A2RU30 521 aaPredicted RBP17.07■□□□□ 0.32
CNOT1-215ENST00000569020 RFX5P48382 616 aaPredicted RBP17.07■□□□□ 0.32
CNOT1-215ENST00000569020 MAP3K9P80192 1104 aa17.07■□□□□ 0.32
CNOT1-215ENST00000569020 CDAN1Q8IWY9 1227 aa17.07■□□□□ 0.32
CNOT1-215ENST00000569020 LPIN2Q92539 896 aa17.07■□□□□ 0.32
CNOT1-215ENST00000569020 ERO1AQ96HE7 468 aa17.07■□□□□ 0.32
CNOT1-215ENST00000569020 ZDHHC15Q96MV8 337 aa17.07■□□□□ 0.32
CNOT1-215ENST00000569020 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
CNOT1-215ENST00000569020 UBTFL1P0CB47 393 aaPredicted RBP17.06■□□□□ 0.32
CNOT1-215ENST00000569020 CACNB3P54284 484 aa17.06■□□□□ 0.32
CNOT1-215ENST00000569020 CRHR2Q13324 411 aa17.06■□□□□ 0.32
CNOT1-215ENST00000569020 VGLL4Q14135 290 aa17.06■□□□□ 0.32
CNOT1-215ENST00000569020 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.06■□□□□ 0.32
CNOT1-215ENST00000569020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.06■□□□□ 0.32
CNOT1-215ENST00000569020 WDR66Q8TBY9 1149 aa17.06■□□□□ 0.32
CNOT1-215ENST00000569020 HOOK2Q96ED9 719 aa17.06■□□□□ 0.32
CNOT1-215ENST00000569020 PTPN18Q99952 460 aa17.06■□□□□ 0.32
CNOT1-215ENST00000569020 GTF2A2P52657 109 aa17.05■□□□□ 0.32
CNOT1-215ENST00000569020 HHIPL2Q6UWX4 724 aa17.05■□□□□ 0.32
CNOT1-215ENST00000569020 OTOP1Q7RTM1 612 aa17.05■□□□□ 0.32
CNOT1-215ENST00000569020 FAM83AQ86UY5 434 aa17.05■□□□□ 0.32
CNOT1-215ENST00000569020 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
CNOT1-215ENST00000569020 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
CNOT1-215ENST00000569020 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
CNOT1-215ENST00000569020 SP3Q02447 781 aa17.04■□□□□ 0.32
CNOT1-215ENST00000569020 FKBP1CQ5VVH2 108 aa17.04■□□□□ 0.32
CNOT1-215ENST00000569020 APOBEC3HQ6NTF7 200 aaKnown RBP17.04■□□□□ 0.32
CNOT1-215ENST00000569020 ATG9AQ7Z3C6 839 aa17.04■□□□□ 0.32
CNOT1-215ENST00000569020 TRMT2AQ8IZ69 625 aaKnown RBP17.04■□□□□ 0.32
CNOT1-215ENST00000569020 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
CNOT1-215ENST00000569020 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
CNOT1-215ENST00000569020 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
CNOT1-215ENST00000569020 CCL15-CCL14A0A0B4J2E2 113 aa17.03■□□□□ 0.32
CNOT1-215ENST00000569020 CIAO1O76071 339 aa17.03■□□□□ 0.32
CNOT1-215ENST00000569020 SLC34A2O95436 690 aa17.03■□□□□ 0.32
CNOT1-215ENST00000569020 CCL15Q16663 113 aa17.03■□□□□ 0.32
CNOT1-215ENST00000569020 CD99L2Q8TCZ2 262 aa17.03■□□□□ 0.32
CNOT1-215ENST00000569020 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
CNOT1-215ENST00000569020 API5Q9BZZ5 524 aaKnown RBP17.03■□□□□ 0.32
CNOT1-215ENST00000569020 SIL1Q9H173 461 aa17.03■□□□□ 0.32
CNOT1-215ENST00000569020 GNL3LQ9NVN8 582 aaKnown RBP17.03■□□□□ 0.32
CNOT1-215ENST00000569020 CEP126Q9P2H0 1117 aa17.03■□□□□ 0.32
CNOT1-215ENST00000569020 RPAP1Q9BWH6 1393 aaPredicted RBP17.02■□□□□ 0.32
CNOT1-215ENST00000569020 TAF1CQ15572 869 aaPredicted RBP17.02■□□□□ 0.32
CNOT1-215ENST00000569020 ATP2B3Q16720 1220 aa17.02■□□□□ 0.32
CNOT1-215ENST00000569020 DCAF15Q66K64 600 aa17.02■□□□□ 0.32
CNOT1-215ENST00000569020 INTS3Q68E01 1043 aaKnown RBP17.02■□□□□ 0.32
CNOT1-215ENST00000569020 WRNIP1Q96S55 665 aa17.02■□□□□ 0.32
CNOT1-215ENST00000569020 ZFYVE28Q9HCC9 887 aa17.02■□□□□ 0.32
CNOT1-215ENST00000569020 PTPN22Q9Y2R2 807 aa17.02■□□□□ 0.32
CNOT1-215ENST00000569020 TNRC18O15417 2968 aaPredicted RBP17.02■□□□□ 0.31
CNOT1-215ENST00000569020 RBBP6Q7Z6E9 1792 aaKnown RBP17.02■□□□□ 0.31
CNOT1-215ENST00000569020 SPDYE5A6NIY4 337 aa17.01■□□□□ 0.31
CNOT1-215ENST00000569020 WDHD1O75717 1129 aaPredicted RBP17.01■□□□□ 0.31
CNOT1-215ENST00000569020 ERO1BQ86YB8 467 aa17.01■□□□□ 0.31
CNOT1-215ENST00000569020 BRI3BPQ8WY22 251 aa17.01■□□□□ 0.31
CNOT1-215ENST00000569020 EFCC1Q9HA90 598 aa17.01■□□□□ 0.31
CNOT1-215ENST00000569020 MYH2Q9UKX2 1941 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms