RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
CNOT1-214ENST00000568917 EDC3Q96F86 508 aaKnown RBP11.24□□□□□ -0.61
CNOT1-214ENST00000568917 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
CNOT1-214ENST00000568917 TFCP2L1Q9NZI6 479 aa11.24□□□□□ -0.61
CNOT1-214ENST00000568917 EP400Q96L91 3159 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 POLRMTO00411 1230 aaKnown RBP11.23□□□□□ -0.61
CNOT1-214ENST00000568917 SERPINB2P05120 415 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 PSMA5P28066 241 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 SLC4A3P48751 1232 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
CNOT1-214ENST00000568917 GRAPQ13588 217 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 KRT32Q14532 448 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 UBE3CQ15386 1083 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 PRR5LQ6MZQ0 368 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 SMIM5Q71RC9 77 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
CNOT1-214ENST00000568917 APPBP2Q92624 585 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 ANTXR1Q9H6X2 564 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 GNL3LQ9NVN8 582 aaKnown RBP11.23□□□□□ -0.61
CNOT1-214ENST00000568917 MINPP1Q9UNW1 487 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 SNX14Q9Y5W7 946 aa11.23□□□□□ -0.61
CNOT1-214ENST00000568917 PSDA5PKW4 1024 aaPredicted RBP11.22□□□□□ -0.61
CNOT1-214ENST00000568917 ZAP70P43403 619 aa11.22□□□□□ -0.61
CNOT1-214ENST00000568917 PHKA1P46020 1223 aa11.22□□□□□ -0.61
CNOT1-214ENST00000568917 PTH1RQ03431 593 aa11.22□□□□□ -0.61
CNOT1-214ENST00000568917 ZNF827Q17R98 1081 aa11.22□□□□□ -0.61
CNOT1-214ENST00000568917 CAVIN4Q5BKX8 364 aa11.22□□□□□ -0.61
CNOT1-214ENST00000568917 SPATA5Q8NB90 893 aa11.22□□□□□ -0.61
CNOT1-214ENST00000568917 CELF1Q92879 486 aaKnown RBP11.22□□□□□ -0.61
CNOT1-214ENST00000568917 RBM17Q96I25 401 aaKnown RBP11.22□□□□□ -0.61
CNOT1-214ENST00000568917 PALD1Q9ULE6 856 aa11.22□□□□□ -0.61
CNOT1-214ENST00000568917 RBM8AQ9Y5S9 174 aaKnown RBP11.22□□□□□ -0.61
CNOT1-214ENST00000568917 TAF1P21675 1872 aa11.22□□□□□ -0.61
CNOT1-214ENST00000568917 COL4A1P02462 1669 aa11.21□□□□□ -0.61
CNOT1-214ENST00000568917 BBOX1O75936 387 aa11.21□□□□□ -0.61
CNOT1-214ENST00000568917 HOXA10P31260 410 aaPredicted RBP11.21□□□□□ -0.61
CNOT1-214ENST00000568917 KCNJ4P48050 445 aa11.21□□□□□ -0.61
CNOT1-214ENST00000568917 NEK4P51957 841 aa11.21□□□□□ -0.61
CNOT1-214ENST00000568917 FOSBP53539 338 aa11.21□□□□□ -0.61
CNOT1-214ENST00000568917 SCARF1Q14162 830 aa11.21□□□□□ -0.61
CNOT1-214ENST00000568917 C15orf52Q6ZUT6 534 aaKnown RBP11.21□□□□□ -0.61
CNOT1-214ENST00000568917 ZNF589Q86UQ0 364 aaPredicted RBP11.21□□□□□ -0.61
CNOT1-214ENST00000568917 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
CNOT1-214ENST00000568917 CRAMP1Q96RY5 1269 aa11.21□□□□□ -0.61
CNOT1-214ENST00000568917 CWC22Q9HCG8 908 aaKnown RBP11.21□□□□□ -0.61
CNOT1-214ENST00000568917 LEMD3Q9Y2U8 911 aa11.21□□□□□ -0.61
CNOT1-214ENST00000568917 RPAP1Q9BWH6 1393 aaPredicted RBP11.21□□□□□ -0.62
CNOT1-214ENST00000568917 MYH13Q9UKX3 1938 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 CD2BP2O95400 341 aaKnown RBP11.2□□□□□ -0.62
CNOT1-214ENST00000568917 CYP2E1P05181 493 aaPredicted RBP11.2□□□□□ -0.62
CNOT1-214ENST00000568917 ADD2P35612 726 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 DDIT3P35638 169 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 MAP3K12Q12852 859 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 CREB3L3Q68CJ9 461 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 COL23A1Q86Y22 540 aaPredicted RBP11.2□□□□□ -0.62
CNOT1-214ENST00000568917 KCNV2Q8TDN2 545 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 RPGRQ92834 1020 aaKnown RBP11.2□□□□□ -0.62
CNOT1-214ENST00000568917 INTS4Q96HW7 963 aaKnown RBP11.2□□□□□ -0.62
CNOT1-214ENST00000568917 CAMKK2Q96RR4 588 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 BRIP1Q9BX63 1249 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
CNOT1-214ENST00000568917 CHMP5Q9NZZ3 219 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 CTNNA3Q9UI47 895 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 DENND2AQ9ULE3 1009 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 NDUFB9Q9Y6M9 179 aa11.2□□□□□ -0.62
CNOT1-214ENST00000568917 LRRC37AA6NMS7 1700 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 MAST3O60307 1309 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 DUOX1Q9NRD9 1551 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 SLC27A2O14975 620 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 HSP90AA1P07900 732 aaKnown RBP11.19□□□□□ -0.62
CNOT1-214ENST00000568917 HMGB1P09429 215 aaKnown RBP11.19□□□□□ -0.62
CNOT1-214ENST00000568917 DDR1Q08345 913 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 RASGRF1Q13972 1273 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 VPS53Q5VIR6 699 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
CNOT1-214ENST00000568917 FBXO33Q7Z6M2 555 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 ZNF454Q8N9F8 522 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 TTC14Q96N46 770 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 XDHP47989 1333 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 PNPLA7Q6ZV29 1317 aa11.19□□□□□ -0.62
CNOT1-214ENST00000568917 ANKRD31Q8N7Z5 1873 aa11.18□□□□□ -0.62
CNOT1-214ENST00000568917 HSPD1P10809 573 aaKnown RBP11.18□□□□□ -0.62
CNOT1-214ENST00000568917 CUL4AQ13619 759 aa11.18□□□□□ -0.62
CNOT1-214ENST00000568917 ANKRD1Q15327 319 aa11.18□□□□□ -0.62
CNOT1-214ENST00000568917 RUFY3Q7L099 469 aa11.18□□□□□ -0.62
CNOT1-214ENST00000568917 CCDC125Q86Z20 511 aa11.18□□□□□ -0.62
CNOT1-214ENST00000568917 OSBP2Q969R2 916 aa11.18□□□□□ -0.62
CNOT1-214ENST00000568917 CYP46A1Q9Y6A2 500 aa11.18□□□□□ -0.62
CNOT1-214ENST00000568917 MYO5AQ9Y4I1 1855 aaKnown RBP11.18□□□□□ -0.62
CNOT1-214ENST00000568917 KIAA1551Q9HCM1 1747 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 CASTP20810 708 aaKnown RBP11.17□□□□□ -0.62
CNOT1-214ENST00000568917 ATP2B4P23634 1241 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 PDE6BP35913 854 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 BAG6P46379 1132 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 BCAMP50895 628 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 SF3B2Q13435 895 aaKnown RBP11.17□□□□□ -0.62
CNOT1-214ENST00000568917 SLC15A2Q16348 729 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 SLC9C2Q5TAH2 1124 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms