RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
USB1-214ENST00000568848 INHBEP58166 350 aa18.88■□□□□ 0.61
USB1-214ENST00000568848 CCL15Q16663 113 aa18.88■□□□□ 0.61
USB1-214ENST00000568848 CCDC27Q2M243 656 aa18.88■□□□□ 0.61
USB1-214ENST00000568848 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
USB1-214ENST00000568848 TDRD7Q8NHU6 1098 aaKnown RBP18.88■□□□□ 0.61
USB1-214ENST00000568848 ARMC5Q96C12 935 aa18.88■□□□□ 0.61
USB1-214ENST00000568848 KAZALD1Q96I82 304 aa18.88■□□□□ 0.61
USB1-214ENST00000568848 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
USB1-214ENST00000568848 FAM84BQ96KN1 310 aaPredicted RBP18.88■□□□□ 0.61
USB1-214ENST00000568848 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
USB1-214ENST00000568848 SZT2Q5T011 3432 aa18.88■□□□□ 0.61
USB1-214ENST00000568848 TESPA1A2RU30 521 aaPredicted RBP18.87■□□□□ 0.61
USB1-214ENST00000568848 CRKP46108 304 aa18.87■□□□□ 0.61
USB1-214ENST00000568848 MMP14P50281 582 aa18.87■□□□□ 0.61
USB1-214ENST00000568848 TAF1CQ15572 869 aaPredicted RBP18.87■□□□□ 0.61
USB1-214ENST00000568848 CCDC57Q2TAC2 916 aa18.87■□□□□ 0.61
USB1-214ENST00000568848 SLC4A10Q6U841 1118 aa18.87■□□□□ 0.61
USB1-214ENST00000568848 FAM205AQ6ZU69 1335 aa18.87■□□□□ 0.61
USB1-214ENST00000568848 SH3TC2Q8TF17 1288 aa18.87■□□□□ 0.61
USB1-214ENST00000568848 GRM8O00222 908 aa18.86■□□□□ 0.61
USB1-214ENST00000568848 FKBP1AP62942 108 aaKnown RBP18.86■□□□□ 0.61
USB1-214ENST00000568848 ZNF333Q96JL9 665 aa18.86■□□□□ 0.61
USB1-214ENST00000568848 HIBADHP31937 336 aaKnown RBP18.85■□□□□ 0.61
USB1-214ENST00000568848 LRRC24Q50LG9 513 aa18.85■□□□□ 0.61
USB1-214ENST00000568848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.85■□□□□ 0.61
USB1-214ENST00000568848 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
USB1-214ENST00000568848 CACNA1FO60840 1977 aa18.84■□□□□ 0.61
USB1-214ENST00000568848 IL16Q14005 1332 aa18.84■□□□□ 0.61
USB1-214ENST00000568848 FXR1P51114 621 aaKnown RBP eCLIP18.84■□□□□ 0.61
USB1-214ENST00000568848 INTS3Q68E01 1043 aaKnown RBP18.84■□□□□ 0.61
USB1-214ENST00000568848 OTUD7BQ6GQQ9 843 aa18.84■□□□□ 0.61
USB1-214ENST00000568848 ZKSCAN4Q969J2 545 aaPredicted RBP18.84■□□□□ 0.61
USB1-214ENST00000568848 COLQQ9Y215 455 aaPredicted RBP18.84■□□□□ 0.61
USB1-214ENST00000568848 SNCAIPQ9Y6H5 919 aa18.84■□□□□ 0.61
USB1-214ENST00000568848 NBPF7P0C2Y1 421 aaPredicted RBP18.83■□□□□ 0.6
USB1-214ENST00000568848 CTGFP29279 349 aa18.83■□□□□ 0.6
USB1-214ENST00000568848 MAP3K9P80192 1104 aa18.83■□□□□ 0.6
USB1-214ENST00000568848 C9orf78Q9NZ63 289 aaPredicted RBP18.83■□□□□ 0.6
USB1-214ENST00000568848 SLC9C1Q4G0N8 1177 aa18.82■□□□□ 0.6
USB1-214ENST00000568848 SERPINA10Q9UK55 444 aa18.82■□□□□ 0.6
USB1-214ENST00000568848 BTBD19C9JJ37 291 aa18.81■□□□□ 0.6
USB1-214ENST00000568848 SLC4A8Q2Y0W8 1093 aa18.81■□□□□ 0.6
USB1-214ENST00000568848 GCC1Q96CN9 775 aa18.81■□□□□ 0.6
USB1-214ENST00000568848 BICC1Q9H694 974 aaKnown RBP18.81■□□□□ 0.6
USB1-214ENST00000568848 ZFYVE28Q9HCC9 887 aa18.81■□□□□ 0.6
USB1-214ENST00000568848 RANBP2P49792 3224 aaKnown RBP18.81■□□□□ 0.6
USB1-214ENST00000568848 BCAMP50895 628 aa18.8■□□□□ 0.6
USB1-214ENST00000568848 TNFAIP1Q13829 316 aa18.8■□□□□ 0.6
USB1-214ENST00000568848 UBE4AQ14139 1066 aa18.8■□□□□ 0.6
USB1-214ENST00000568848 MIGA2Q7L4E1 593 aa18.8■□□□□ 0.6
USB1-214ENST00000568848 WRNIP1Q96S55 665 aa18.8■□□□□ 0.6
USB1-214ENST00000568848 TMEM106CQ9BVX2 250 aa18.8■□□□□ 0.6
USB1-214ENST00000568848 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
USB1-214ENST00000568848 RIPOR2Q9Y4F9 1068 aa18.8■□□□□ 0.6
USB1-214ENST00000568848 CSADQ9Y600 493 aa18.8■□□□□ 0.6
USB1-214ENST00000568848 H0YGN5 161 aa18.79■□□□□ 0.6
USB1-214ENST00000568848 IRF6O14896 467 aa18.79■□□□□ 0.6
USB1-214ENST00000568848 GTF2A2P52657 109 aa18.79■□□□□ 0.6
USB1-214ENST00000568848 MTFR1Q15390 333 aa18.79■□□□□ 0.6
USB1-214ENST00000568848 FBXO33Q7Z6M2 555 aa18.79■□□□□ 0.6
USB1-214ENST00000568848 ANKRD44Q8N8A2 993 aa18.79■□□□□ 0.6
USB1-214ENST00000568848 CPA4Q9UI42 421 aa18.79■□□□□ 0.6
USB1-214ENST00000568848 SPDYE5A6NIY4 337 aa18.78■□□□□ 0.6
USB1-214ENST00000568848 UNCXA6NJT0 531 aa18.78■□□□□ 0.6
USB1-214ENST00000568848 INPP5BP32019 993 aa18.78■□□□□ 0.6
USB1-214ENST00000568848 SLURP2P0DP57 97 aa18.77■□□□□ 0.6
USB1-214ENST00000568848 METTL24Q5JXM2 366 aa18.77■□□□□ 0.6
USB1-214ENST00000568848 VPS37DQ86XT2 251 aa18.77■□□□□ 0.6
USB1-214ENST00000568848 SHISA4Q96DD7 197 aa18.77■□□□□ 0.6
USB1-214ENST00000568848 SRCIN1Q9C0H9 1055 aa18.77■□□□□ 0.6
USB1-214ENST00000568848 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
USB1-214ENST00000568848 TNNI2P48788 182 aa18.76■□□□□ 0.59
USB1-214ENST00000568848 LACTBP83111 547 aaPredicted RBP18.76■□□□□ 0.59
USB1-214ENST00000568848 APOBEC3HQ6NTF7 200 aaKnown RBP18.76■□□□□ 0.59
USB1-214ENST00000568848 VGLL2Q8N8G2 317 aa18.76■□□□□ 0.59
USB1-214ENST00000568848 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
USB1-214ENST00000568848 TCP10Q12799 353 aa18.75■□□□□ 0.59
USB1-214ENST00000568848 WDR63Q8IWG1 891 aa18.75■□□□□ 0.59
USB1-214ENST00000568848 TEKT1Q969V4 418 aa18.75■□□□□ 0.59
USB1-214ENST00000568848 TLR2O60603 784 aa18.74■□□□□ 0.59
USB1-214ENST00000568848 ALDH1L1O75891 902 aa18.74■□□□□ 0.59
USB1-214ENST00000568848 DIXDC1Q155Q3 683 aa18.74■□□□□ 0.59
USB1-214ENST00000568848 MROH5Q6ZUA9 1318 aa18.74■□□□□ 0.59
USB1-214ENST00000568848 CETPP11597 493 aa18.73■□□□□ 0.59
USB1-214ENST00000568848 NFIAQ12857 509 aa18.73■□□□□ 0.59
USB1-214ENST00000568848 CHRDL2Q6WN34 429 aa18.73■□□□□ 0.59
USB1-214ENST00000568848 ERO1BQ86YB8 467 aa18.73■□□□□ 0.59
USB1-214ENST00000568848 TRIM47Q96LD4 638 aa18.73■□□□□ 0.59
USB1-214ENST00000568848 PPIL2Q13356 520 aa18.72■□□□□ 0.59
USB1-214ENST00000568848 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
USB1-214ENST00000568848 ZFPM1Q8IX07 1006 aa18.72■□□□□ 0.59
USB1-214ENST00000568848 ZDHHC15Q96MV8 337 aa18.72■□□□□ 0.59
USB1-214ENST00000568848 AK9Q5TCS8 1911 aa18.72■□□□□ 0.59
USB1-214ENST00000568848 MYH13Q9UKX3 1938 aa18.71■□□□□ 0.59
USB1-214ENST00000568848 SNAPC2Q13487 334 aa18.71■□□□□ 0.59
USB1-214ENST00000568848 MOGSQ13724 837 aa18.71■□□□□ 0.59
USB1-214ENST00000568848 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
USB1-214ENST00000568848 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.71■□□□□ 0.59
USB1-214ENST00000568848 PDHXO00330 501 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms