RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 CCAR1Q8IX12 1150 aaKnown RBP11.28□□□□□ -0.6
TCF4-240ENST00000568673 MARCH10Q8NA82 808 aaPredicted RBP11.28□□□□□ -0.6
TCF4-240ENST00000568673 RGS22Q8NE09 1264 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 FBXO18Q8NFZ0 1043 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 ACSBG1Q96GR2 724 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 C8orf76Q96K31 380 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 TPM2P07951 284 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 SNW1Q13573 536 aaKnown RBP11.28□□□□□ -0.6
TCF4-240ENST00000568673 CCDC152Q4G0S7 254 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 LUZP1Q86V48 1076 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 CBX8Q9HC52 389 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 SEC31BQ9NQW1 1179 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 RTEL1Q9NZ71 1219 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 ORC3Q9UBD5 711 aaPredicted RBP11.28□□□□□ -0.6
TCF4-240ENST00000568673 ANGEL1Q9UNK9 670 aaKnown RBP11.28□□□□□ -0.6
TCF4-240ENST00000568673 MYO5AQ9Y4I1 1855 aaKnown RBP11.28□□□□□ -0.6
TCF4-240ENST00000568673 FAM177BA6PVY3 158 aa11.27□□□□□ -0.6
TCF4-240ENST00000568673 PATL2C9JE40 543 aaKnown RBP11.27□□□□□ -0.6
TCF4-240ENST00000568673 MAP3K12Q12852 859 aa11.27□□□□□ -0.6
TCF4-240ENST00000568673 ITPK1Q13572 414 aa11.27□□□□□ -0.6
TCF4-240ENST00000568673 RASGRF1Q13972 1273 aa11.27□□□□□ -0.6
TCF4-240ENST00000568673 TBC1D10CQ8IV04 446 aa11.27□□□□□ -0.6
TCF4-240ENST00000568673 MPNDQ8N594 471 aa11.27□□□□□ -0.6
TCF4-240ENST00000568673 ZNF830Q96NB3 372 aaPredicted RBP11.27□□□□□ -0.6
TCF4-240ENST00000568673 ZMYM6O95789 1325 aa11.27□□□□□ -0.6
TCF4-240ENST00000568673 DDX60Q8IY21 1712 aaKnown RBP11.27□□□□□ -0.61
TCF4-240ENST00000568673 A0A0G2JS52 829 aa11.27□□□□□ -0.61
TCF4-240ENST00000568673 ME1P48163 572 aa11.27□□□□□ -0.61
TCF4-240ENST00000568673 CCDC73Q6ZRK6 1079 aa11.27□□□□□ -0.61
TCF4-240ENST00000568673 ENGASEQ8NFI3 743 aa11.27□□□□□ -0.61
TCF4-240ENST00000568673 TTC12Q9H892 705 aaPredicted RBP11.27□□□□□ -0.61
TCF4-240ENST00000568673 DENND2AQ9ULE3 1009 aa11.27□□□□□ -0.61
TCF4-240ENST00000568673 NIP7Q9Y221 180 aaKnown RBP eCLIP11.27□□□□□ -0.61
TCF4-240ENST00000568673 RTL9Q8NET4 1388 aa11.27□□□□□ -0.61
TCF4-240ENST00000568673 SNAP23O00161 211 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 SH2B2O14492 632 aaPredicted RBP11.26□□□□□ -0.61
TCF4-240ENST00000568673 NTSR2O95665 410 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 TPM3P06753 285 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 IGHMBP2P38935 993 aaKnown RBP11.26□□□□□ -0.61
TCF4-240ENST00000568673 ZNF165P49910 485 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 FAM160A1Q05DH4 1040 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 ADALQ6DHV7 355 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 OTUD7BQ6GQQ9 843 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 CYB5R4Q7L1T6 521 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 BRAPQ7Z569 592 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 MAGEB6Q8N7X4 407 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 PIBF1Q8WXW3 757 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 TMEM87BQ96K49 555 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 GOLPH3LQ9H4A5 285 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 IFNL3Q8IZI9 196 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 LINC00301Q8NCQ3 95 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 TDRD7Q8NHU6 1098 aaKnown RBP11.26□□□□□ -0.61
TCF4-240ENST00000568673 NKX2-3Q8TAU0 364 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 PCDHA7Q9UN72 937 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 R3HCC1Q9Y3T6 440 aaKnown RBP11.26□□□□□ -0.61
TCF4-240ENST00000568673 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
TCF4-240ENST00000568673 GOLGA6L6A8MZA4 724 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 KINO60870 393 aaKnown RBP11.25□□□□□ -0.61
TCF4-240ENST00000568673 CDKL5O76039 1030 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 BARGINQ6ZT62 677 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 IGDCC4Q8TDY8 1250 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 DNAJC25Q9H1X3 360 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 A0A1W2PQ27 194 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 A0A1W2PQ64 194 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 A0A1W2PQD8 194 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 B4E1Z4 1266 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 POLR3DP05423 398 aaPredicted RBP11.25□□□□□ -0.61
TCF4-240ENST00000568673 METAP2P50579 478 aaKnown RBP eCLIP11.25□□□□□ -0.61
TCF4-240ENST00000568673 BCAMP50895 628 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 APOA5Q6Q788 366 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 SGMS1Q86VZ5 419 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 KCNG4Q8TDN1 519 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
TCF4-240ENST00000568673 NAPBQ9H115 298 aa11.25□□□□□ -0.61
TCF4-240ENST00000568673 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
TCF4-240ENST00000568673 RREB1Q92766 1687 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 MBD4O95243 580 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 YEATS4O95619 227 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 GNAT2P19087 354 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
TCF4-240ENST00000568673 CPLX2Q6PUV4 134 aaKnown RBP11.24□□□□□ -0.61
TCF4-240ENST00000568673 CLEC4GQ6UXB4 293 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 FSIP1Q8NA03 581 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 EPB41L4AQ9HCS5 686 aaPredicted RBP11.24□□□□□ -0.61
TCF4-240ENST00000568673 ZNF652Q9Y2D9 606 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 CLIC4Q9Y696 253 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 NRAPQ86VF7 1730 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 GSG1L2A8MUP6 293 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 LIFRP42702 1097 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
TCF4-240ENST00000568673 CHRNDQ07001 517 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 STK38Q15208 465 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 SYNE3Q6ZMZ3 975 aa11.24□□□□□ -0.61
TCF4-240ENST00000568673 FMR1NBQ8N0W7 255 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms