RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, human

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-223	ENST00000568301	RABL6	Q3YEC7	729 aa	Predicted RBP	18.97	■□□□□ 0.63
COMMD4-223	ENST00000568301	OTUD7B	Q6GQQ9	843 aa		18.97	■□□□□ 0.63
COMMD4-223	ENST00000568301	ANKRD13A	Q8IZ07	590 aa		18.97	■□□□□ 0.63
COMMD4-223	ENST00000568301	PUS3	Q9BZE2	481 aa	Known RBP	18.97	■□□□□ 0.63
COMMD4-223	ENST00000568301	TTF2	Q9UNY4	1162 aa	Known RBP	18.97	■□□□□ 0.63
COMMD4-223	ENST00000568301	ZNF521	Q96K83	1311 aa		18.97	■□□□□ 0.63
COMMD4-223	ENST00000568301	EN2	P19622	333 aa	Predicted RBP	18.96	■□□□□ 0.63
COMMD4-223	ENST00000568301	SPDYE2	Q495Y8	402 aa		18.96	■□□□□ 0.63
COMMD4-223	ENST00000568301	ELP3	Q9H9T3	547 aa		18.96	■□□□□ 0.63
COMMD4-223	ENST00000568301	EFCC1	Q9HA90	598 aa		18.96	■□□□□ 0.63
COMMD4-223	ENST00000568301	ZNF70	Q9UC06	446 aa	Predicted RBP	18.96	■□□□□ 0.63
COMMD4-223	ENST00000568301	OTOF	Q9HC10	1997 aa		18.95	■□□□□ 0.62
COMMD4-223	ENST00000568301	SP3	Q02447	781 aa		18.95	■□□□□ 0.62
COMMD4-223	ENST00000568301	HABP4	Q5JVS0	413 aa	Known RBP	18.95	■□□□□ 0.62
COMMD4-223	ENST00000568301	FBXO33	Q7Z6M2	555 aa		18.95	■□□□□ 0.62
COMMD4-223	ENST00000568301	DZIP1L	Q8IYY4	767 aa	Known RBP	18.95	■□□□□ 0.62
COMMD4-223	ENST00000568301	ARMC5	Q96C12	935 aa		18.95	■□□□□ 0.62
COMMD4-223	ENST00000568301	OPTN	Q96CV9	577 aa		18.95	■□□□□ 0.62
COMMD4-223	ENST00000568301	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.95	■□□□□ 0.62
COMMD4-223	ENST00000568301	CDAN1	Q8IWY9	1227 aa		18.94	■□□□□ 0.62
COMMD4-223	ENST00000568301	MRPL50	Q8N5N7	158 aa	Known RBP	18.94	■□□□□ 0.62
COMMD4-223	ENST00000568301	MS4A4A	Q96JQ5	239 aa		18.94	■□□□□ 0.62
COMMD4-223	ENST00000568301	BICC1	Q9H694	974 aa	Known RBP	18.94	■□□□□ 0.62
COMMD4-223	ENST00000568301	TDRD3	Q9H7E2	651 aa	Known RBP	18.94	■□□□□ 0.62
COMMD4-223	ENST00000568301	HDLBP	Q00341	1268 aa	Known RBP	18.93	■□□□□ 0.62
COMMD4-223	ENST00000568301	VPS37D	Q86XT2	251 aa		18.93	■□□□□ 0.62
COMMD4-223	ENST00000568301	TBC1D22A	Q8WUA7	517 aa		18.93	■□□□□ 0.62
COMMD4-223	ENST00000568301	CNKSR2	Q8WXI2	1034 aa		18.93	■□□□□ 0.62
COMMD4-223	ENST00000568301	ARAP2	Q8WZ64	1704 aa		18.93	■□□□□ 0.62
COMMD4-223	ENST00000568301	PTPRC	P08575	1304 aa		18.93	■□□□□ 0.62
COMMD4-223	ENST00000568301	PDE8B	O95263	885 aa		18.92	■□□□□ 0.62
COMMD4-223	ENST00000568301	CRK	P46108	304 aa		18.92	■□□□□ 0.62
COMMD4-223	ENST00000568301	CAVIN4	Q5BKX8	364 aa		18.92	■□□□□ 0.62
COMMD4-223	ENST00000568301	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	18.92	■□□□□ 0.62
COMMD4-223	ENST00000568301	ANKRD44	Q8N8A2	993 aa		18.92	■□□□□ 0.62
COMMD4-223	ENST00000568301	TEPSIN	Q96N21	525 aa		18.92	■□□□□ 0.62
COMMD4-223	ENST00000568301	TNNI2	P48788	182 aa		18.91	■□□□□ 0.62
COMMD4-223	ENST00000568301	LRRC24	Q50LG9	513 aa		18.91	■□□□□ 0.62
COMMD4-223	ENST00000568301	METTL24	Q5JXM2	366 aa		18.91	■□□□□ 0.62
COMMD4-223	ENST00000568301	VGLL2	Q8N8G2	317 aa		18.91	■□□□□ 0.62
COMMD4-223	ENST00000568301	BRI3BP	Q8WY22	251 aa		18.91	■□□□□ 0.62
COMMD4-223	ENST00000568301	MRI	Q9BWK5	157 aa		18.91	■□□□□ 0.62
COMMD4-223	ENST00000568301	TCP10L2	B9ZVM9	353 aa		18.9	■□□□□ 0.62
COMMD4-223	ENST00000568301	TMEM39B	Q9GZU3	492 aa		18.9	■□□□□ 0.62
COMMD4-223	ENST00000568301	USP44	Q9H0E7	712 aa		18.9	■□□□□ 0.62
COMMD4-223	ENST00000568301		E9PSI1	815 aa		18.89	■□□□□ 0.61
COMMD4-223	ENST00000568301	FRAT2	O75474	233 aa	Predicted RBP	18.89	■□□□□ 0.61
COMMD4-223	ENST00000568301	MAP3K9	P80192	1104 aa		18.89	■□□□□ 0.61
COMMD4-223	ENST00000568301	VGLL4	Q14135	290 aa		18.89	■□□□□ 0.61
COMMD4-223	ENST00000568301	GRIK5	Q16478	980 aa		18.89	■□□□□ 0.61
COMMD4-223	ENST00000568301	ZNF333	Q96JL9	665 aa		18.89	■□□□□ 0.61
COMMD4-223	ENST00000568301	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.89	■□□□□ 0.61
COMMD4-223	ENST00000568301	SZT2	Q5T011	3432 aa		18.89	■□□□□ 0.61
COMMD4-223	ENST00000568301	CCL15-CCL14	A0A0B4J2E2	113 aa		18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	TAF1C	Q15572	869 aa	Predicted RBP	18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	CCL15	Q16663	113 aa		18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	FAM43A	Q8N2R8	423 aa		18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	SSH1	Q8WYL5	1049 aa		18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	TEKT1	Q969V4	418 aa		18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	ZFYVE28	Q9HCC9	887 aa		18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	SUGT1	Q9Y2Z0	365 aa		18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	PTCH2	Q9Y6C5	1203 aa		18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	KIF16B	Q96L93	1317 aa		18.88	■□□□□ 0.61
COMMD4-223	ENST00000568301	BCAM	P50895	628 aa		18.87	■□□□□ 0.61
COMMD4-223	ENST00000568301	GTF2A2	P52657	109 aa		18.87	■□□□□ 0.61
COMMD4-223	ENST00000568301	CHAF1A	Q13111	956 aa	Predicted RBP	18.87	■□□□□ 0.61
COMMD4-223	ENST00000568301	FKBP1C	Q5VVH2	108 aa		18.87	■□□□□ 0.61
COMMD4-223	ENST00000568301	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	18.87	■□□□□ 0.61
COMMD4-223	ENST00000568301	ZDHHC15	Q96MV8	337 aa		18.87	■□□□□ 0.61
COMMD4-223	ENST00000568301	TMEM106C	Q9BVX2	250 aa		18.87	■□□□□ 0.61
COMMD4-223	ENST00000568301	IFIT1	P09914	478 aa	Known RBP	18.86	■□□□□ 0.61
COMMD4-223	ENST00000568301	SLC9C1	Q4G0N8	1177 aa		18.86	■□□□□ 0.61
COMMD4-223	ENST00000568301	OTUD5	Q96G74	571 aa		18.86	■□□□□ 0.61
COMMD4-223	ENST00000568301	CSAD	Q9Y600	493 aa		18.86	■□□□□ 0.61
COMMD4-223	ENST00000568301	MAST3	O60307	1309 aa		18.85	■□□□□ 0.61
COMMD4-223	ENST00000568301	MYC	P01106	439 aa	Predicted RBP	18.85	■□□□□ 0.61
COMMD4-223	ENST00000568301	FGFR2	P21802	821 aa		18.85	■□□□□ 0.61
COMMD4-223	ENST00000568301	CACNB3	P54284	484 aa		18.85	■□□□□ 0.61
COMMD4-223	ENST00000568301	SLFN5	Q08AF3	891 aa		18.85	■□□□□ 0.61
COMMD4-223	ENST00000568301	PUM3	Q15397	648 aa	Known RBP	18.85	■□□□□ 0.61
COMMD4-223	ENST00000568301	NBPF11	Q86T75	865 aa		18.85	■□□□□ 0.61
COMMD4-223	ENST00000568301	FAM83A	Q86UY5	434 aa		18.85	■□□□□ 0.61
COMMD4-223	ENST00000568301	KLHDC4	Q8TBB5	520 aa		18.85	■□□□□ 0.61
COMMD4-223	ENST00000568301	EYA2	O00167	538 aa		18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	FXR1	P51114	621 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	ARHGEF6	Q15052	776 aa		18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	ALDH1L2	Q3SY69	923 aa		18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	HHIPL2	Q6UWX4	724 aa		18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	HOOK2	Q96ED9	719 aa		18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	ARHGAP39	Q9C0H5	1083 aa		18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	TMOD2	Q9NZR1	351 aa		18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	ZSWIM8	A7E2V4	1837 aa		18.84	■□□□□ 0.61
COMMD4-223	ENST00000568301	RFX5	P48382	616 aa	Predicted RBP	18.83	■□□□□ 0.6
COMMD4-223	ENST00000568301	SLC4A8	Q2Y0W8	1093 aa		18.83	■□□□□ 0.6
COMMD4-223	ENST00000568301	SNCAIP	Q9Y6H5	919 aa		18.83	■□□□□ 0.6
COMMD4-223	ENST00000568301	CEP290	O15078	2479 aa		18.83	■□□□□ 0.6
COMMD4-223	ENST00000568301	RANBP2	P49792	3224 aa	Known RBP	18.83	■□□□□ 0.6
COMMD4-223	ENST00000568301	SPDYE5	A6NIY4	337 aa		18.82	■□□□□ 0.6
COMMD4-223	ENST00000568301	WDR66	Q8TBY9	1149 aa		18.82	■□□□□ 0.6

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