RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 TBC1D22AQ8WUA7 517 aa23.62■■□□□ 1.37
GTF3C1-207ENST00000567806 SSH1Q8WYL5 1049 aa23.62■■□□□ 1.37
GTF3C1-207ENST00000567806 TCP10L2B9ZVM9 353 aa23.61■■□□□ 1.37
GTF3C1-207ENST00000567806 USP44Q9H0E7 712 aa23.61■■□□□ 1.37
GTF3C1-207ENST00000567806 IGF2BP3O00425 579 aaKnown RBP eCLIP23.59■■□□□ 1.37
GTF3C1-207ENST00000567806 HDLBPQ00341 1268 aaKnown RBP23.59■■□□□ 1.37
GTF3C1-207ENST00000567806 SLFN5Q08AF3 891 aa23.59■■□□□ 1.37
GTF3C1-207ENST00000567806 KLHDC4Q8TBB5 520 aa23.59■■□□□ 1.37
GTF3C1-207ENST00000567806 ECM29Q5VYK3 1845 aa23.59■■□□□ 1.37
GTF3C1-207ENST00000567806 IFIT1P09914 478 aaKnown RBP23.58■■□□□ 1.37
GTF3C1-207ENST00000567806 BCAMP50895 628 aa23.58■■□□□ 1.37
GTF3C1-207ENST00000567806 GRIK5Q16478 980 aa23.58■■□□□ 1.37
GTF3C1-207ENST00000567806 VGLL2Q8N8G2 317 aa23.58■■□□□ 1.37
GTF3C1-207ENST00000567806 TEKT1Q969V4 418 aa23.58■■□□□ 1.37
GTF3C1-207ENST00000567806 ELP3Q9H9T3 547 aa23.58■■□□□ 1.37
GTF3C1-207ENST00000567806 GJA5P36382 358 aa23.57■■□□□ 1.36
GTF3C1-207ENST00000567806 ALDH1L2Q3SY69 923 aa23.57■■□□□ 1.36
GTF3C1-207ENST00000567806 OPTNQ96CV9 577 aa23.57■■□□□ 1.36
GTF3C1-207ENST00000567806 TEPSINQ96N21 525 aa23.57■■□□□ 1.36
GTF3C1-207ENST00000567806 TMEM39BQ9GZU3 492 aa23.57■■□□□ 1.36
GTF3C1-207ENST00000567806 MAP3K9P80192 1104 aa23.56■■□□□ 1.36
GTF3C1-207ENST00000567806 PUM3Q15397 648 aaKnown RBP23.56■■□□□ 1.36
GTF3C1-207ENST00000567806 MRIQ9BWK5 157 aa23.56■■□□□ 1.36
GTF3C1-207ENST00000567806 TRIM17Q9Y577 477 aa23.56■■□□□ 1.36
GTF3C1-207ENST00000567806 ERO1AQ96HE7 468 aa23.55■■□□□ 1.36
GTF3C1-207ENST00000567806 SMC4Q9NTJ3 1288 aa23.55■■□□□ 1.36
GTF3C1-207ENST00000567806 TMOD2Q9NZR1 351 aa23.55■■□□□ 1.36
GTF3C1-207ENST00000567806 TESPA1A2RU30 521 aaPredicted RBP23.54■■□□□ 1.36
GTF3C1-207ENST00000567806 EYA2O00167 538 aa23.54■■□□□ 1.36
GTF3C1-207ENST00000567806 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.54■■□□□ 1.36
GTF3C1-207ENST00000567806 CDAN1Q8IWY9 1227 aa23.54■■□□□ 1.36
GTF3C1-207ENST00000567806 SUGT1Q9Y2Z0 365 aa23.54■■□□□ 1.36
GTF3C1-207ENST00000567806 CSADQ9Y600 493 aa23.54■■□□□ 1.36
GTF3C1-207ENST00000567806 MAST3O60307 1309 aa23.54■■□□□ 1.36
GTF3C1-207ENST00000567806 TNRC18O15417 2968 aaPredicted RBP23.53■■□□□ 1.36
GTF3C1-207ENST00000567806 SLC5A1P13866 664 aa23.53■■□□□ 1.36
GTF3C1-207ENST00000567806 FGFR2P21802 821 aa23.53■■□□□ 1.36
GTF3C1-207ENST00000567806 CRHR2Q13324 411 aa23.53■■□□□ 1.36
GTF3C1-207ENST00000567806 ZDHHC15Q96MV8 337 aa23.53■■□□□ 1.36
GTF3C1-207ENST00000567806 PTPN18Q99952 460 aa23.53■■□□□ 1.36
GTF3C1-207ENST00000567806 KIF16BQ96L93 1317 aa23.53■■□□□ 1.36
GTF3C1-207ENST00000567806 SLC34A2O95436 690 aa23.52■■□□□ 1.36
GTF3C1-207ENST00000567806 CACNB3P54284 484 aa23.52■■□□□ 1.36
GTF3C1-207ENST00000567806 OTOP1Q7RTM1 612 aa23.52■■□□□ 1.36
GTF3C1-207ENST00000567806 LPIN2Q92539 896 aa23.52■■□□□ 1.36
GTF3C1-207ENST00000567806 HOOK2Q96ED9 719 aa23.52■■□□□ 1.36
GTF3C1-207ENST00000567806 CDCA7LQ96GN5 454 aa23.52■■□□□ 1.36
GTF3C1-207ENST00000567806 RFX5P48382 616 aaPredicted RBP23.51■■□□□ 1.35
GTF3C1-207ENST00000567806 GTF2A2P52657 109 aa23.51■■□□□ 1.35
GTF3C1-207ENST00000567806 VGLL4Q14135 290 aa23.51■■□□□ 1.35
GTF3C1-207ENST00000567806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.51■■□□□ 1.35
GTF3C1-207ENST00000567806 WDR66Q8TBY9 1149 aa23.51■■□□□ 1.35
GTF3C1-207ENST00000567806 MS4A4AQ96JQ5 239 aa23.51■■□□□ 1.35
GTF3C1-207ENST00000567806 UBTFL1P0CB47 393 aaPredicted RBP23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 SP3Q02447 781 aa23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 FKBP1CQ5VVH2 108 aa23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 APOBEC3HQ6NTF7 200 aaKnown RBP23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 HHIPL2Q6UWX4 724 aa23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 FAM83AQ86UY5 434 aa23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 CD99L2Q8TCZ2 262 aa23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 CNKSR2Q8WXI2 1034 aa23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 HDAC5Q9UQL6 1122 aa23.5■■□□□ 1.35
GTF3C1-207ENST00000567806 OTUD5Q96G74 571 aa23.49■■□□□ 1.35
GTF3C1-207ENST00000567806 EFCC1Q9HA90 598 aa23.49■■□□□ 1.35
GTF3C1-207ENST00000567806 CCL15-CCL14A0A0B4J2E2 113 aa23.48■■□□□ 1.35
GTF3C1-207ENST00000567806 CCL15Q16663 113 aa23.48■■□□□ 1.35
GTF3C1-207ENST00000567806 INTS3Q68E01 1043 aaKnown RBP23.48■■□□□ 1.35
GTF3C1-207ENST00000567806 BRI3BPQ8WY22 251 aa23.48■■□□□ 1.35
GTF3C1-207ENST00000567806 ZFYVE28Q9HCC9 887 aa23.48■■□□□ 1.35
GTF3C1-207ENST00000567806 CEP126Q9P2H0 1117 aa23.48■■□□□ 1.35
GTF3C1-207ENST00000567806 FBXO3Q9UK99 471 aa23.48■■□□□ 1.35
GTF3C1-207ENST00000567806 WDHD1O75717 1129 aaPredicted RBP23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 CT47B1P0C2W7 299 aaPredicted RBP23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 ARHGEF6Q15052 776 aa23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 TAF1CQ15572 869 aaPredicted RBP23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 ATG9AQ7Z3C6 839 aa23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 TRMT2AQ8IZ69 625 aaKnown RBP23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 SIL1Q9H173 461 aa23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 GNL3LQ9NVN8 582 aaKnown RBP23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 NOB1Q9ULX3 412 aaKnown RBP23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 PTPN22Q9Y2R2 807 aa23.47■■□□□ 1.35
GTF3C1-207ENST00000567806 DCAF15Q66K64 600 aa23.46■■□□□ 1.35
GTF3C1-207ENST00000567806 ERO1BQ86YB8 467 aa23.46■■□□□ 1.35
GTF3C1-207ENST00000567806 WRNIP1Q96S55 665 aa23.46■■□□□ 1.35
GTF3C1-207ENST00000567806 API5Q9BZZ5 524 aaKnown RBP23.46■■□□□ 1.35
GTF3C1-207ENST00000567806 PDE4DIPQ5VU43 2346 aa23.45■■□□□ 1.35
GTF3C1-207ENST00000567806 ARAP2Q8WZ64 1704 aa23.45■■□□□ 1.34
GTF3C1-207ENST00000567806 SPDYE5A6NIY4 337 aa23.45■■□□□ 1.34
GTF3C1-207ENST00000567806 CIAO1O76071 339 aa23.45■■□□□ 1.34
GTF3C1-207ENST00000567806 ATP2B3Q16720 1220 aa23.45■■□□□ 1.34
GTF3C1-207ENST00000567806 PRPF38BQ5VTL8 546 aaKnown RBP23.45■■□□□ 1.34
GTF3C1-207ENST00000567806 CETPP11597 493 aa23.44■■□□□ 1.34
GTF3C1-207ENST00000567806 ZKSCAN4Q969J2 545 aaPredicted RBP23.44■■□□□ 1.34
GTF3C1-207ENST00000567806 FAM151AQ8WW52 585 aa23.43■■□□□ 1.34
GTF3C1-207ENST00000567806 ZNF341Q9BYN7 854 aa23.43■■□□□ 1.34
GTF3C1-207ENST00000567806 SNCAIPQ9Y6H5 919 aa23.43■■□□□ 1.34
GTF3C1-207ENST00000567806 LDHBP07195 334 aaKnown RBP23.42■■□□□ 1.34
GTF3C1-207ENST00000567806 IL15P40933 162 aaPredicted RBP23.42■■□□□ 1.34
GTF3C1-207ENST00000567806 SNAPC2Q13487 334 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms