RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 CHRNDQ07001 517 aa20.82■□□□□ 0.92
CMTM3-214ENST00000567572 SCRN1Q12765 414 aa20.81■□□□□ 0.92
CMTM3-214ENST00000567572 TTF1Q15361 905 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-214ENST00000567572 NBPF5PQ86XG9 351 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-214ENST00000567572 CLSTN2Q9H4D0 955 aa20.81■□□□□ 0.92
CMTM3-214ENST00000567572 LAMA4Q16363 1823 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 JAK2O60674 1132 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 GTF2E1P29083 439 aaPredicted RBP20.8■□□□□ 0.92
CMTM3-214ENST00000567572 EVCP57679 992 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 TRAPPC3LQ5T215 181 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 ANKRD18AQ8IVF6 992 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 NSUN7Q8NE18 718 aaKnown RBP20.8■□□□□ 0.92
CMTM3-214ENST00000567572 APPBP2Q92624 585 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 TNMDQ9H2S6 317 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 SNAP23O00161 211 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 ADRA2BP18089 450 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 RFC4P35249 363 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 RGS22Q8NE09 1264 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 PIBF1Q8WXW3 757 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.8■□□□□ 0.92
CMTM3-214ENST00000567572 SALL1Q9NSC2 1324 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 DOCK2Q92608 1830 aa20.8■□□□□ 0.92
CMTM3-214ENST00000567572 TAF1P21675 1872 aa20.79■□□□□ 0.92
CMTM3-214ENST00000567572 GOLGA6L6A8MZA4 724 aa20.79■□□□□ 0.92
CMTM3-214ENST00000567572 E7EWF7 191 aa20.79■□□□□ 0.92
CMTM3-214ENST00000567572 LIG1P18858 919 aa20.79■□□□□ 0.92
CMTM3-214ENST00000567572 SLC27A3Q5K4L6 730 aa20.79■□□□□ 0.92
CMTM3-214ENST00000567572 TPTE2Q6XPS3 522 aa20.79■□□□□ 0.92
CMTM3-214ENST00000567572 PIH1D3Q9NQM4 214 aaKnown RBP20.79■□□□□ 0.92
CMTM3-214ENST00000567572 BSDC1Q9NW68 430 aaPredicted RBP20.79■□□□□ 0.92
CMTM3-214ENST00000567572 TYRO3Q06418 890 aa20.78■□□□□ 0.92
CMTM3-214ENST00000567572 ZSCAN25Q6NSZ9 544 aa20.78■□□□□ 0.92
CMTM3-214ENST00000567572 DACT1Q9NYF0 836 aa20.78■□□□□ 0.92
CMTM3-214ENST00000567572 MYO5AQ9Y4I1 1855 aaKnown RBP20.78■□□□□ 0.92
CMTM3-214ENST00000567572 ADD2P35612 726 aa20.78■□□□□ 0.92
CMTM3-214ENST00000567572 WASHC4Q2M389 1173 aa20.78■□□□□ 0.92
CMTM3-214ENST00000567572 WDR19Q8NEZ3 1342 aa20.78■□□□□ 0.92
CMTM3-214ENST00000567572 TNRC6CQ9HCJ0 1690 aaKnown RBP20.78■□□□□ 0.92
CMTM3-214ENST00000567572 CARMIL3Q8ND23 1372 aa20.77■□□□□ 0.92
CMTM3-214ENST00000567572 FOXP2O15409 715 aa20.77■□□□□ 0.92
CMTM3-214ENST00000567572 RASGRF1Q13972 1273 aa20.77■□□□□ 0.92
CMTM3-214ENST00000567572 SPATA5Q8NB90 893 aa20.77■□□□□ 0.92
CMTM3-214ENST00000567572 NLRP3Q96P20 1036 aa20.77■□□□□ 0.92
CMTM3-214ENST00000567572 PTPDC1A2A3K4 754 aa20.76■□□□□ 0.91
CMTM3-214ENST00000567572 CTAGE5O15320 804 aa20.76■□□□□ 0.91
CMTM3-214ENST00000567572 FAM173BQ6P4H8 233 aa20.76■□□□□ 0.91
CMTM3-214ENST00000567572 PUS7LQ9H0K6 701 aaKnown RBP20.76■□□□□ 0.91
CMTM3-214ENST00000567572 MRVI1Q9Y6F6 885 aa20.76■□□□□ 0.91
CMTM3-214ENST00000567572 MYH15Q9Y2K3 1946 aa20.76■□□□□ 0.91
CMTM3-214ENST00000567572 TRIM37O94972 964 aa20.76■□□□□ 0.91
CMTM3-214ENST00000567572 UBE3CQ15386 1083 aa20.76■□□□□ 0.91
CMTM3-214ENST00000567572 SASS6Q6UVJ0 657 aa20.76■□□□□ 0.91
CMTM3-214ENST00000567572 CELF1Q92879 486 aaKnown RBP20.76■□□□□ 0.91
CMTM3-214ENST00000567572 ZNF396Q96N95 335 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-214ENST00000567572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
CMTM3-214ENST00000567572 IMMTQ16891 758 aaKnown RBP20.75■□□□□ 0.91
CMTM3-214ENST00000567572 SLC9C2Q5TAH2 1124 aa20.75■□□□□ 0.91
CMTM3-214ENST00000567572 BICD2Q8TD16 824 aa20.75■□□□□ 0.91
CMTM3-214ENST00000567572 RCOR1Q9UKL0 485 aa20.75■□□□□ 0.91
CMTM3-214ENST00000567572 MINPP1Q9UNW1 487 aa20.75■□□□□ 0.91
CMTM3-214ENST00000567572 ZNF804BA4D1E1 1349 aa20.75■□□□□ 0.91
CMTM3-214ENST00000567572 BCAMP50895 628 aa20.74■□□□□ 0.91
CMTM3-214ENST00000567572 NFIXQ14938 502 aa20.74■□□□□ 0.91
CMTM3-214ENST00000567572 SPTLC3Q9NUV7 552 aa20.74■□□□□ 0.91
CMTM3-214ENST00000567572 TFIP11Q9UBB9 837 aaKnown RBP20.74■□□□□ 0.91
CMTM3-214ENST00000567572 R3HCC1Q9Y3T6 440 aaKnown RBP20.74■□□□□ 0.91
CMTM3-214ENST00000567572 DHX16O60231 1041 aaKnown RBP20.74■□□□□ 0.91
CMTM3-214ENST00000567572 IDH1O75874 414 aaKnown RBP20.74■□□□□ 0.91
CMTM3-214ENST00000567572 CTDNEP1O95476 244 aa20.74■□□□□ 0.91
CMTM3-214ENST00000567572 PDE6AP16499 860 aa20.74■□□□□ 0.91
CMTM3-214ENST00000567572 APOBRQ0VD83 1088 aa20.74■□□□□ 0.91
CMTM3-214ENST00000567572 UBE4AQ14139 1066 aa20.74■□□□□ 0.91
CMTM3-214ENST00000567572 PGBD1Q96JS3 809 aa20.74■□□□□ 0.91
CMTM3-214ENST00000567572 TCRBV5S4A2TA0A5A2 114 aa20.73■□□□□ 0.91
CMTM3-214ENST00000567572 GPAA1O43292 621 aa20.73■□□□□ 0.91
CMTM3-214ENST00000567572 DTNBO60941 627 aa20.73■□□□□ 0.91
CMTM3-214ENST00000567572 PDIA3P30101 505 aaKnown RBP20.73■□□□□ 0.91
CMTM3-214ENST00000567572 RBM6P78332 1123 aaKnown RBP20.73■□□□□ 0.91
CMTM3-214ENST00000567572 ZNF772Q68DY9 489 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-214ENST00000567572 ADD1P35611 737 aaKnown RBP20.72■□□□□ 0.91
CMTM3-214ENST00000567572 RPS8P62241 208 aaKnown RBP20.72■□□□□ 0.91
CMTM3-214ENST00000567572 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.72■□□□□ 0.91
CMTM3-214ENST00000567572 TDRD7Q8NHU6 1098 aaKnown RBP20.72■□□□□ 0.91
CMTM3-214ENST00000567572 DDX11Q96FC9 970 aa20.72■□□□□ 0.91
CMTM3-214ENST00000567572 WWC3Q9ULE0 1092 aa20.72■□□□□ 0.91
CMTM3-214ENST00000567572 ZNF532Q9HCE3 1301 aa20.72■□□□□ 0.91
CMTM3-214ENST00000567572 A0A0G2JLW4 131 aa20.72■□□□□ 0.91
CMTM3-214ENST00000567572 TM4SF1P30408 202 aa20.72■□□□□ 0.91
CMTM3-214ENST00000567572 TPRNQ4KMQ1 711 aa20.72■□□□□ 0.91
CMTM3-214ENST00000567572 CCDC24Q8N4L8 307 aa20.72■□□□□ 0.91
CMTM3-214ENST00000567572 LRRC2Q9BYS8 371 aa20.72■□□□□ 0.91
CMTM3-214ENST00000567572 TTLL5Q6EMB2 1281 aa20.71■□□□□ 0.91
CMTM3-214ENST00000567572 PRIMPOLQ96LW4 560 aa20.71■□□□□ 0.91
CMTM3-214ENST00000567572 DYNC1I1O14576 645 aa20.7■□□□□ 0.91
CMTM3-214ENST00000567572 NR1I2O75469 434 aa20.7■□□□□ 0.91
CMTM3-214ENST00000567572 HSP90AA2PQ14568 343 aaPredicted RBP20.7■□□□□ 0.91
CMTM3-214ENST00000567572 NOLC1Q14978 699 aaKnown RBP eCLIP20.7■□□□□ 0.91
CMTM3-214ENST00000567572 GYS1P13807 737 aa20.7■□□□□ 0.9
CMTM3-214ENST00000567572 CAMK4Q16566 473 aa20.7■□□□□ 0.9
CMTM3-214ENST00000567572 ANO6Q4KMQ2 910 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms