RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 ZNF333Q96JL9 665 aa14.33□□□□□ -0.12
SPG7-216ENST00000567138 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
SPG7-216ENST00000567138 FOXO4P98177 505 aa14.32□□□□□ -0.12
SPG7-216ENST00000567138 IFIT5Q13325 482 aaKnown RBP14.32□□□□□ -0.12
SPG7-216ENST00000567138 TAF1CQ15572 869 aaPredicted RBP14.32□□□□□ -0.12
SPG7-216ENST00000567138 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
SPG7-216ENST00000567138 SLC9C1Q4G0N8 1177 aa14.32□□□□□ -0.12
SPG7-216ENST00000567138 LINS1Q8NG48 757 aa14.32□□□□□ -0.12
SPG7-216ENST00000567138 BRI3BPQ8WY22 251 aa14.32□□□□□ -0.12
SPG7-216ENST00000567138 ZNF594Q96JF6 807 aaPredicted RBP14.32□□□□□ -0.12
SPG7-216ENST00000567138 MS4A4AQ96JQ5 239 aa14.32□□□□□ -0.12
SPG7-216ENST00000567138 TDRD3Q9H7E2 651 aaKnown RBP14.32□□□□□ -0.12
SPG7-216ENST00000567138 ZNF70Q9UC06 446 aaPredicted RBP14.32□□□□□ -0.12
SPG7-216ENST00000567138 AK9Q5TCS8 1911 aa14.31□□□□□ -0.12
SPG7-216ENST00000567138 CCL15-CCL14A0A0B4J2E2 113 aa14.31□□□□□ -0.12
SPG7-216ENST00000567138 TNFAIP1Q13829 316 aa14.31□□□□□ -0.12
SPG7-216ENST00000567138 CCL15Q16663 113 aa14.31□□□□□ -0.12
SPG7-216ENST00000567138 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
SPG7-216ENST00000567138 COLQQ9Y215 455 aaPredicted RBP14.31□□□□□ -0.12
SPG7-216ENST00000567138 TCP10L2B9ZVM9 353 aa14.3□□□□□ -0.12
SPG7-216ENST00000567138 VGLL4Q14135 290 aa14.3□□□□□ -0.12
SPG7-216ENST00000567138 SLC4A8Q2Y0W8 1093 aa14.3□□□□□ -0.12
SPG7-216ENST00000567138 TAF7LQ5H9L4 462 aa14.3□□□□□ -0.12
SPG7-216ENST00000567138 MFSD14BQ5SR56 506 aa14.3□□□□□ -0.12
SPG7-216ENST00000567138 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.3□□□□□ -0.12
SPG7-216ENST00000567138 FAM43AQ8N2R8 423 aa14.3□□□□□ -0.12
SPG7-216ENST00000567138 TEPSINQ96N21 525 aa14.3□□□□□ -0.12
SPG7-216ENST00000567138 ZFYVE28Q9HCC9 887 aa14.3□□□□□ -0.12
SPG7-216ENST00000567138 TTF2Q9UNY4 1162 aaKnown RBP14.3□□□□□ -0.12
SPG7-216ENST00000567138 EPHA10Q5JZY3 1008 aa14.29□□□□□ -0.12
SPG7-216ENST00000567138 LMBR1LQ6UX01 489 aa14.29□□□□□ -0.12
SPG7-216ENST00000567138 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
SPG7-216ENST00000567138 ARHGAP39Q9C0H5 1083 aa14.29□□□□□ -0.12
SPG7-216ENST00000567138 TMEM39BQ9GZU3 492 aa14.29□□□□□ -0.12
SPG7-216ENST00000567138 CNNM1Q9NRU3 951 aa14.29□□□□□ -0.12
SPG7-216ENST00000567138 MGAMO43451 1857 aa14.29□□□□□ -0.12
SPG7-216ENST00000567138 FAM205AQ6ZU69 1335 aa14.29□□□□□ -0.12
SPG7-216ENST00000567138 F6X3S4 739 aa14.28□□□□□ -0.12
SPG7-216ENST00000567138 GYG1P46976 350 aa14.28□□□□□ -0.12
SPG7-216ENST00000567138 GTF2A2P52657 109 aa14.28□□□□□ -0.12
SPG7-216ENST00000567138 LDHAL6AQ6ZMR3 332 aa14.28□□□□□ -0.12
SPG7-216ENST00000567138 NBPF11Q86T75 865 aa14.28□□□□□ -0.12
SPG7-216ENST00000567138 DZIP1LQ8IYY4 767 aaKnown RBP14.28□□□□□ -0.12
SPG7-216ENST00000567138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.28□□□□□ -0.12
SPG7-216ENST00000567138 SH3TC2Q8TF17 1288 aa14.28□□□□□ -0.12
SPG7-216ENST00000567138 ECM2O94769 699 aaPredicted RBP14.27□□□□□ -0.12
SPG7-216ENST00000567138 CRKP46108 304 aa14.27□□□□□ -0.12
SPG7-216ENST00000567138 ARHGEF6Q15052 776 aa14.27□□□□□ -0.12
SPG7-216ENST00000567138 WWC1Q8IX03 1113 aa14.27□□□□□ -0.12
SPG7-216ENST00000567138 TDRD7Q8NHU6 1098 aaKnown RBP14.27□□□□□ -0.12
SPG7-216ENST00000567138 SERPINA10Q9UK55 444 aa14.27□□□□□ -0.12
SPG7-216ENST00000567138 CSADQ9Y600 493 aa14.27□□□□□ -0.12
SPG7-216ENST00000567138 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.13
SPG7-216ENST00000567138 CACNB3P54284 484 aa14.26□□□□□ -0.13
SPG7-216ENST00000567138 MAP3K9P80192 1104 aa14.26□□□□□ -0.13
SPG7-216ENST00000567138 GRIK5Q16478 980 aa14.26□□□□□ -0.13
SPG7-216ENST00000567138 CCDC27Q2M243 656 aa14.26□□□□□ -0.13
SPG7-216ENST00000567138 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
SPG7-216ENST00000567138 H0YGN5 161 aa14.25□□□□□ -0.13
SPG7-216ENST00000567138 HIBADHP31937 336 aaKnown RBP14.25□□□□□ -0.13
SPG7-216ENST00000567138 TNNI2P48788 182 aa14.25□□□□□ -0.13
SPG7-216ENST00000567138 BEND3Q5T5X7 828 aa14.25□□□□□ -0.13
SPG7-216ENST00000567138 IQSEC3Q9UPP2 1182 aaPredicted RBP14.25□□□□□ -0.13
SPG7-216ENST00000567138 SNCAIPQ9Y6H5 919 aa14.25□□□□□ -0.13
SPG7-216ENST00000567138 SPDYE5A6NIY4 337 aa14.24□□□□□ -0.13
SPG7-216ENST00000567138 CHAF1AQ13111 956 aaPredicted RBP14.24□□□□□ -0.13
SPG7-216ENST00000567138 KIF22Q14807 665 aa14.24□□□□□ -0.13
SPG7-216ENST00000567138 FAM84BQ96KN1 310 aaPredicted RBP14.24□□□□□ -0.13
SPG7-216ENST00000567138 PUS3Q9BZE2 481 aaKnown RBP14.24□□□□□ -0.13
SPG7-216ENST00000567138 IL16Q14005 1332 aa14.24□□□□□ -0.13
SPG7-216ENST00000567138 BTBD19C9JJ37 291 aa14.23□□□□□ -0.13
SPG7-216ENST00000567138 GRM8O00222 908 aa14.23□□□□□ -0.13
SPG7-216ENST00000567138 TLR2O60603 784 aa14.23□□□□□ -0.13
SPG7-216ENST00000567138 LACTBP83111 547 aaPredicted RBP14.23□□□□□ -0.13
SPG7-216ENST00000567138 UBE4AQ14139 1066 aa14.23□□□□□ -0.13
SPG7-216ENST00000567138 WRNIP1Q96S55 665 aa14.23□□□□□ -0.13
SPG7-216ENST00000567138 DOCK2Q92608 1830 aa14.23□□□□□ -0.13
SPG7-216ENST00000567138 VAMP4O75379 141 aa14.22□□□□□ -0.13
SPG7-216ENST00000567138 WDHD1O75717 1129 aaPredicted RBP14.22□□□□□ -0.13
SPG7-216ENST00000567138 CETPP11597 493 aa14.22□□□□□ -0.13
SPG7-216ENST00000567138 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
SPG7-216ENST00000567138 ZKSCAN4Q969J2 545 aaPredicted RBP14.22□□□□□ -0.13
SPG7-216ENST00000567138 SHISA4Q96DD7 197 aa14.22□□□□□ -0.13
SPG7-216ENST00000567138 IRF6O14896 467 aa14.22□□□□□ -0.13
SPG7-216ENST00000567138 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
SPG7-216ENST00000567138 MTFR1Q15390 333 aa14.22□□□□□ -0.13
SPG7-216ENST00000567138 ERO1BQ86YB8 467 aa14.22□□□□□ -0.13
SPG7-216ENST00000567138 SUCLG2Q96I99 432 aa14.22□□□□□ -0.13
SPG7-216ENST00000567138 PTPRFP10586 1907 aa14.21□□□□□ -0.13
SPG7-216ENST00000567138 SZT2Q5T011 3432 aa14.21□□□□□ -0.13
SPG7-216ENST00000567138 CTGFP29279 349 aa14.21□□□□□ -0.14
SPG7-216ENST00000567138 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.14
SPG7-216ENST00000567138 PPIL2Q13356 520 aa14.21□□□□□ -0.14
SPG7-216ENST00000567138 SNAPC2Q13487 334 aa14.21□□□□□ -0.14
SPG7-216ENST00000567138 VPS37DQ86XT2 251 aa14.21□□□□□ -0.14
SPG7-216ENST00000567138 TEKT1Q969V4 418 aa14.21□□□□□ -0.14
SPG7-216ENST00000567138 C9orf78Q9NZ63 289 aaPredicted RBP14.21□□□□□ -0.14
SPG7-216ENST00000567138 TMOD2Q9NZR1 351 aa14.21□□□□□ -0.14
SPG7-216ENST00000567138 CPA4Q9UI42 421 aa14.21□□□□□ -0.14
SPG7-216ENST00000567138 SALL2Q9Y467 1007 aaPredicted RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms