RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TDRD3Q9H7E2 651 aaKnown RBP20.77■□□□□ 0.92
TSR3-202ENST00000566296 TRIM17Q9Y577 477 aa20.77■□□□□ 0.92
TSR3-202ENST00000566296 ZNF521Q96K83 1311 aa20.77■□□□□ 0.91
TSR3-202ENST00000566296 TCP10L2B9ZVM9 353 aa20.75■□□□□ 0.91
TSR3-202ENST00000566296 FBXO33Q7Z6M2 555 aa20.75■□□□□ 0.91
TSR3-202ENST00000566296 MRPL50Q8N5N7 158 aaKnown RBP20.75■□□□□ 0.91
TSR3-202ENST00000566296 ERO1AQ96HE7 468 aa20.75■□□□□ 0.91
TSR3-202ENST00000566296 ELP3Q9H9T3 547 aa20.75■□□□□ 0.91
TSR3-202ENST00000566296 IQSEC3Q9UPP2 1182 aaPredicted RBP20.75■□□□□ 0.91
TSR3-202ENST00000566296 GJA5P36382 358 aa20.74■□□□□ 0.91
TSR3-202ENST00000566296 LRRC24Q50LG9 513 aa20.74■□□□□ 0.91
TSR3-202ENST00000566296 PRPF38BQ5VTL8 546 aaKnown RBP20.74■□□□□ 0.91
TSR3-202ENST00000566296 ANKRD44Q8N8A2 993 aa20.74■□□□□ 0.91
TSR3-202ENST00000566296 OPTNQ96CV9 577 aa20.74■□□□□ 0.91
TSR3-202ENST00000566296 MYH13Q9UKX3 1938 aa20.73■□□□□ 0.91
TSR3-202ENST00000566296 E9PSI1 815 aa20.73■□□□□ 0.91
TSR3-202ENST00000566296 HDLBPQ00341 1268 aaKnown RBP20.73■□□□□ 0.91
TSR3-202ENST00000566296 CRHR2Q13324 411 aa20.73■□□□□ 0.91
TSR3-202ENST00000566296 OTOP1Q7RTM1 612 aa20.73■□□□□ 0.91
TSR3-202ENST00000566296 TEKT1Q969V4 418 aa20.73■□□□□ 0.91
TSR3-202ENST00000566296 TMOD2Q9NZR1 351 aa20.73■□□□□ 0.91
TSR3-202ENST00000566296 MAST3O60307 1309 aa20.73■□□□□ 0.91
TSR3-202ENST00000566296 TNRC18O15417 2968 aaPredicted RBP20.73■□□□□ 0.91
TSR3-202ENST00000566296 PDE8BO95263 885 aa20.72■□□□□ 0.91
TSR3-202ENST00000566296 TEPSINQ96N21 525 aa20.72■□□□□ 0.91
TSR3-202ENST00000566296 TMEM39BQ9GZU3 492 aa20.72■□□□□ 0.91
TSR3-202ENST00000566296 CSADQ9Y600 493 aa20.72■□□□□ 0.91
TSR3-202ENST00000566296 TESPA1A2RU30 521 aaPredicted RBP20.71■□□□□ 0.91
TSR3-202ENST00000566296 IFIT1P09914 478 aaKnown RBP20.71■□□□□ 0.91
TSR3-202ENST00000566296 PUM3Q15397 648 aaKnown RBP20.71■□□□□ 0.91
TSR3-202ENST00000566296 CDAN1Q8IWY9 1227 aa20.71■□□□□ 0.91
TSR3-202ENST00000566296 VGLL2Q8N8G2 317 aa20.71■□□□□ 0.91
TSR3-202ENST00000566296 CCER2I3L3R5 266 aa20.7■□□□□ 0.9
TSR3-202ENST00000566296 MAP3K9P80192 1104 aa20.7■□□□□ 0.9
TSR3-202ENST00000566296 VGLL4Q14135 290 aa20.7■□□□□ 0.9
TSR3-202ENST00000566296 GRIK5Q16478 980 aa20.7■□□□□ 0.9
TSR3-202ENST00000566296 MIER1Q8N108 512 aa20.7■□□□□ 0.9
TSR3-202ENST00000566296 CD99L2Q8TCZ2 262 aa20.7■□□□□ 0.9
TSR3-202ENST00000566296 SSH1Q8WYL5 1049 aa20.7■□□□□ 0.9
TSR3-202ENST00000566296 SUGT1Q9Y2Z0 365 aa20.7■□□□□ 0.9
TSR3-202ENST00000566296 KIF16BQ96L93 1317 aa20.7■□□□□ 0.9
TSR3-202ENST00000566296 KIAA0100Q14667 2235 aaKnown RBP20.69■□□□□ 0.9
TSR3-202ENST00000566296 GTF2A2P52657 109 aa20.69■□□□□ 0.9
TSR3-202ENST00000566296 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.69■□□□□ 0.9
TSR3-202ENST00000566296 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.69■□□□□ 0.91e-29■■■■□ 25.6
TSR3-202ENST00000566296 KLHDC4Q8TBB5 520 aa20.69■□□□□ 0.9
TSR3-202ENST00000566296 EFCC1Q9HA90 598 aa20.69■□□□□ 0.9
TSR3-202ENST00000566296 CCL15-CCL14A0A0B4J2E2 113 aa20.68■□□□□ 0.9
TSR3-202ENST00000566296 SLC5A1P13866 664 aa20.68■□□□□ 0.9
TSR3-202ENST00000566296 BCAMP50895 628 aa20.68■□□□□ 0.9
TSR3-202ENST00000566296 SP3Q02447 781 aa20.68■□□□□ 0.9
TSR3-202ENST00000566296 CCL15Q16663 113 aa20.68■□□□□ 0.9
TSR3-202ENST00000566296 INTS3Q68E01 1043 aaKnown RBP20.68■□□□□ 0.9
TSR3-202ENST00000566296 HOOK2Q96ED9 719 aa20.68■□□□□ 0.9
TSR3-202ENST00000566296 ZDHHC15Q96MV8 337 aa20.68■□□□□ 0.9
TSR3-202ENST00000566296 PTPN18Q99952 460 aa20.68■□□□□ 0.9
TSR3-202ENST00000566296 CACNB3P54284 484 aa20.67■□□□□ 0.9
TSR3-202ENST00000566296 TAF1CQ15572 869 aaPredicted RBP20.67■□□□□ 0.9
TSR3-202ENST00000566296 CNKSR2Q8WXI2 1034 aa20.67■□□□□ 0.9
TSR3-202ENST00000566296 BRI3BPQ8WY22 251 aa20.67■□□□□ 0.9
TSR3-202ENST00000566296 OTUD5Q96G74 571 aa20.67■□□□□ 0.9
TSR3-202ENST00000566296 MS4A4AQ96JQ5 239 aa20.67■□□□□ 0.9
TSR3-202ENST00000566296 USP44Q9H0E7 712 aa20.67■□□□□ 0.9
TSR3-202ENST00000566296 ZFYVE28Q9HCC9 887 aa20.67■□□□□ 0.9
TSR3-202ENST00000566296 PTPN22Q9Y2R2 807 aa20.67■□□□□ 0.9
TSR3-202ENST00000566296 RPAP1Q9BWH6 1393 aaPredicted RBP20.67■□□□□ 0.9
TSR3-202ENST00000566296 EYA2O00167 538 aa20.66■□□□□ 0.9
TSR3-202ENST00000566296 WDHD1O75717 1129 aaPredicted RBP20.66■□□□□ 0.9
TSR3-202ENST00000566296 ARHGEF6Q15052 776 aa20.66■□□□□ 0.9
TSR3-202ENST00000566296 FAM83AQ86UY5 434 aa20.66■□□□□ 0.9
TSR3-202ENST00000566296 MRIQ9BWK5 157 aa20.66■□□□□ 0.9
TSR3-202ENST00000566296 SMC4Q9NTJ3 1288 aa20.66■□□□□ 0.9
TSR3-202ENST00000566296 RBBP6Q7Z6E9 1792 aaKnown RBP20.66■□□□□ 0.9
TSR3-202ENST00000566296 SPDYE5A6NIY4 337 aa20.65■□□□□ 0.9
TSR3-202ENST00000566296 FGFR2P21802 821 aa20.65■□□□□ 0.9
TSR3-202ENST00000566296 ALDH1L2Q3SY69 923 aa20.65■□□□□ 0.9
TSR3-202ENST00000566296 FKBP1CQ5VVH2 108 aa20.65■□□□□ 0.9
TSR3-202ENST00000566296 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
TSR3-202ENST00000566296 WDR66Q8TBY9 1149 aa20.65■□□□□ 0.9
TSR3-202ENST00000566296 LPIN2Q92539 896 aa20.65■□□□□ 0.9
TSR3-202ENST00000566296 WRNIP1Q96S55 665 aa20.65■□□□□ 0.9
TSR3-202ENST00000566296 SLFN5Q08AF3 891 aa20.64■□□□□ 0.89
TSR3-202ENST00000566296 HHIPL2Q6UWX4 724 aa20.64■□□□□ 0.89
TSR3-202ENST00000566296 APOBEC3HQ6NTF7 200 aaKnown RBP20.63■□□□□ 0.89
TSR3-202ENST00000566296 ERO1BQ86YB8 467 aa20.63■□□□□ 0.89
TSR3-202ENST00000566296 SNCAIPQ9Y6H5 919 aa20.63■□□□□ 0.89
TSR3-202ENST00000566296 UBTFL1P0CB47 393 aaPredicted RBP20.62■□□□□ 0.89
TSR3-202ENST00000566296 CETPP11597 493 aa20.62■□□□□ 0.89
TSR3-202ENST00000566296 RFX5P48382 616 aaPredicted RBP20.62■□□□□ 0.89
TSR3-202ENST00000566296 FAM43AQ8N2R8 423 aa20.62■□□□□ 0.89
TSR3-202ENST00000566296 ARMC5Q96C12 935 aa20.62■□□□□ 0.89
TSR3-202ENST00000566296 AK9Q5TCS8 1911 aa20.62■□□□□ 0.89
TSR3-202ENST00000566296 POTEFA5A3E0 1075 aa20.61■□□□□ 0.89
TSR3-202ENST00000566296 SNAPC2Q13487 334 aa20.61■□□□□ 0.89
TSR3-202ENST00000566296 ZNF341Q9BYN7 854 aa20.61■□□□□ 0.89
TSR3-202ENST00000566296 ZCCHC17Q9NP64 241 aaKnown RBP20.61■□□□□ 0.89
TSR3-202ENST00000566296 GNL3LQ9NVN8 582 aaKnown RBP20.61■□□□□ 0.89
TSR3-202ENST00000566296 FBXO3Q9UK99 471 aa20.61■□□□□ 0.89
TSR3-202ENST00000566296 PPIL2Q13356 520 aa20.6■□□□□ 0.89
TSR3-202ENST00000566296 ATP2B3Q16720 1220 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms