RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 USP44Q9H0E7 712 aa18.66■□□□□ 0.58
IFT140-207ENST00000566052 IGF2BP3O00425 579 aaKnown RBP eCLIP18.65■□□□□ 0.58
IFT140-207ENST00000566052 CRKP46108 304 aa18.65■□□□□ 0.58
IFT140-207ENST00000566052 TBC1D22AQ8WUA7 517 aa18.65■□□□□ 0.58
IFT140-207ENST00000566052 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
IFT140-207ENST00000566052 TDRD3Q9H7E2 651 aaKnown RBP18.65■□□□□ 0.58
IFT140-207ENST00000566052 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
IFT140-207ENST00000566052 TESPA1A2RU30 521 aaPredicted RBP18.64■□□□□ 0.57
IFT140-207ENST00000566052 GJA5P36382 358 aa18.64■□□□□ 0.57
IFT140-207ENST00000566052 CAVIN4Q5BKX8 364 aa18.64■□□□□ 0.57
IFT140-207ENST00000566052 METTL24Q5JXM2 366 aa18.64■□□□□ 0.57
IFT140-207ENST00000566052 VPS37DQ86XT2 251 aa18.64■□□□□ 0.57
IFT140-207ENST00000566052 MRIQ9BWK5 157 aa18.64■□□□□ 0.57
IFT140-207ENST00000566052 MYH13Q9UKX3 1938 aa18.63■□□□□ 0.57
IFT140-207ENST00000566052 SLFN5Q08AF3 891 aa18.63■□□□□ 0.57
IFT140-207ENST00000566052 GRIK5Q16478 980 aa18.63■□□□□ 0.57
IFT140-207ENST00000566052 ALDH1L2Q3SY69 923 aa18.63■□□□□ 0.57
IFT140-207ENST00000566052 FGFR2P21802 821 aa18.62■□□□□ 0.57
IFT140-207ENST00000566052 TNNI2P48788 182 aa18.62■□□□□ 0.57
IFT140-207ENST00000566052 OTUD7BQ6GQQ9 843 aa18.62■□□□□ 0.57
IFT140-207ENST00000566052 IQSEC3Q9UPP2 1182 aaPredicted RBP18.62■□□□□ 0.57
IFT140-207ENST00000566052 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
IFT140-207ENST00000566052 CDAN1Q8IWY9 1227 aa18.61■□□□□ 0.57
IFT140-207ENST00000566052 KLHDC4Q8TBB5 520 aa18.61■□□□□ 0.57
IFT140-207ENST00000566052 PTPN18Q99952 460 aa18.61■□□□□ 0.57
IFT140-207ENST00000566052 TMEM39BQ9GZU3 492 aa18.61■□□□□ 0.57
IFT140-207ENST00000566052 SUGT1Q9Y2Z0 365 aa18.61■□□□□ 0.57
IFT140-207ENST00000566052 CENPFP49454 3210 aa18.61■□□□□ 0.57
IFT140-207ENST00000566052 TCP10L2B9ZVM9 353 aa18.6■□□□□ 0.57
IFT140-207ENST00000566052 RFX5P48382 616 aaPredicted RBP18.6■□□□□ 0.57
IFT140-207ENST00000566052 BCAMP50895 628 aa18.6■□□□□ 0.57
IFT140-207ENST00000566052 PUM3Q15397 648 aaKnown RBP18.6■□□□□ 0.57
IFT140-207ENST00000566052 FKBP1CQ5VVH2 108 aa18.6■□□□□ 0.57
IFT140-207ENST00000566052 TRMT2AQ8IZ69 625 aaKnown RBP18.6■□□□□ 0.57
IFT140-207ENST00000566052 TEKT1Q969V4 418 aa18.6■□□□□ 0.57
IFT140-207ENST00000566052 OPTNQ96CV9 577 aa18.6■□□□□ 0.57
IFT140-207ENST00000566052 MS4A4AQ96JQ5 239 aa18.6■□□□□ 0.57
IFT140-207ENST00000566052 ZDHHC15Q96MV8 337 aa18.6■□□□□ 0.57
IFT140-207ENST00000566052 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.6■□□□□ 0.57
IFT140-207ENST00000566052 EYA2O00167 538 aa18.59■□□□□ 0.57
IFT140-207ENST00000566052 FRAT2O75474 233 aaPredicted RBP18.59■□□□□ 0.57
IFT140-207ENST00000566052 MAP3K9P80192 1104 aa18.59■□□□□ 0.57
IFT140-207ENST00000566052 CHAF1AQ13111 956 aaPredicted RBP18.59■□□□□ 0.57
IFT140-207ENST00000566052 CRHR2Q13324 411 aa18.59■□□□□ 0.57
IFT140-207ENST00000566052 OTOP1Q7RTM1 612 aa18.59■□□□□ 0.57
IFT140-207ENST00000566052 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.59■□□□□ 0.57
IFT140-207ENST00000566052 ELP3Q9H9T3 547 aa18.59■□□□□ 0.57
IFT140-207ENST00000566052 MAST3O60307 1309 aa18.58■□□□□ 0.57
IFT140-207ENST00000566052 IFIT1P09914 478 aaKnown RBP18.58■□□□□ 0.56
IFT140-207ENST00000566052 APOBEC3HQ6NTF7 200 aaKnown RBP18.58■□□□□ 0.56
IFT140-207ENST00000566052 HHIPL2Q6UWX4 724 aa18.58■□□□□ 0.56
IFT140-207ENST00000566052 FAM83AQ86UY5 434 aa18.58■□□□□ 0.56
IFT140-207ENST00000566052 ERO1AQ96HE7 468 aa18.58■□□□□ 0.56
IFT140-207ENST00000566052 RBBP6Q7Z6E9 1792 aaKnown RBP18.58■□□□□ 0.56
IFT140-207ENST00000566052 VGLL4Q14135 290 aa18.57■□□□□ 0.56
IFT140-207ENST00000566052 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
IFT140-207ENST00000566052 LPIN2Q92539 896 aa18.57■□□□□ 0.56
IFT140-207ENST00000566052 FBXO3Q9UK99 471 aa18.57■□□□□ 0.56
IFT140-207ENST00000566052 TRIM17Q9Y577 477 aa18.57■□□□□ 0.56
IFT140-207ENST00000566052 CT47B1P0C2W7 299 aaPredicted RBP18.56■□□□□ 0.56
IFT140-207ENST00000566052 GTF2A2P52657 109 aa18.56■□□□□ 0.56
IFT140-207ENST00000566052 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
IFT140-207ENST00000566052 CSADQ9Y600 493 aa18.56■□□□□ 0.56
IFT140-207ENST00000566052 CACNB3P54284 484 aa18.55■□□□□ 0.56
IFT140-207ENST00000566052 SP3Q02447 781 aa18.55■□□□□ 0.56
IFT140-207ENST00000566052 INTS3Q68E01 1043 aaKnown RBP18.55■□□□□ 0.56
IFT140-207ENST00000566052 WDR66Q8TBY9 1149 aa18.55■□□□□ 0.56
IFT140-207ENST00000566052 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
IFT140-207ENST00000566052 BRI3BPQ8WY22 251 aa18.55■□□□□ 0.56
IFT140-207ENST00000566052 HOOK2Q96ED9 719 aa18.55■□□□□ 0.56
IFT140-207ENST00000566052 SMC4Q9NTJ3 1288 aa18.55■□□□□ 0.56
IFT140-207ENST00000566052 TMOD2Q9NZR1 351 aa18.55■□□□□ 0.56
IFT140-207ENST00000566052 PTPN22Q9Y2R2 807 aa18.55■□□□□ 0.56
IFT140-207ENST00000566052 RPAP1Q9BWH6 1393 aaPredicted RBP18.55■□□□□ 0.56
IFT140-207ENST00000566052 SPDYE5A6NIY4 337 aa18.54■□□□□ 0.56
IFT140-207ENST00000566052 CIAO1O76071 339 aa18.54■□□□□ 0.56
IFT140-207ENST00000566052 SLC5A1P13866 664 aa18.54■□□□□ 0.56
IFT140-207ENST00000566052 PRPF38BQ5VTL8 546 aaKnown RBP18.54■□□□□ 0.56
IFT140-207ENST00000566052 CD99L2Q8TCZ2 262 aa18.54■□□□□ 0.56
IFT140-207ENST00000566052 KIAA0100Q14667 2235 aaKnown RBP18.53■□□□□ 0.56
IFT140-207ENST00000566052 MKI67P46013 3256 aaKnown RBP18.53■□□□□ 0.56
IFT140-207ENST00000566052 CCL15-CCL14A0A0B4J2E2 113 aa18.53■□□□□ 0.56
IFT140-207ENST00000566052 ZBTB22O15209 634 aa18.53■□□□□ 0.56
IFT140-207ENST00000566052 CCL15Q16663 113 aa18.53■□□□□ 0.56
IFT140-207ENST00000566052 UBTFL1P0CB47 393 aaPredicted RBP18.52■□□□□ 0.56
IFT140-207ENST00000566052 CAP1Q01518 475 aa18.52■□□□□ 0.56
IFT140-207ENST00000566052 ERO1BQ86YB8 467 aa18.52■□□□□ 0.56
IFT140-207ENST00000566052 OTUD5Q96G74 571 aa18.52■□□□□ 0.56
IFT140-207ENST00000566052 EFCC1Q9HA90 598 aa18.52■□□□□ 0.56
IFT140-207ENST00000566052 ZCCHC17Q9NP64 241 aaKnown RBP18.52■□□□□ 0.56
IFT140-207ENST00000566052 SNCAIPQ9Y6H5 919 aa18.52■□□□□ 0.56
IFT140-207ENST00000566052 BRCA2P51587 3418 aa18.51■□□□□ 0.55
IFT140-207ENST00000566052 DCAF15Q66K64 600 aa18.51■□□□□ 0.55
IFT140-207ENST00000566052 FAM43AQ8N2R8 423 aa18.51■□□□□ 0.55
IFT140-207ENST00000566052 ARMC5Q96C12 935 aa18.51■□□□□ 0.55
IFT140-207ENST00000566052 WRNIP1Q96S55 665 aa18.51■□□□□ 0.55
IFT140-207ENST00000566052 ZFYVE28Q9HCC9 887 aa18.51■□□□□ 0.55
IFT140-207ENST00000566052 HDAC5Q9UQL6 1122 aa18.51■□□□□ 0.55
IFT140-207ENST00000566052 SALL1Q9NSC2 1324 aa18.5■□□□□ 0.55
IFT140-207ENST00000566052 TAF1CQ15572 869 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms