RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 CWF19L2Q2TBE0 894 aaKnown RBP15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 TTC14Q96N46 770 aa15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 LZTFL1Q9NQ48 299 aa15.35■□□□□ 0.05
CX3CL1-204ENST00000565912 TLDC2A0PJX2 215 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 IL2RBP14784 551 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 EYA3Q99504 573 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 PPP1R7Q15435 360 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 CCDC117Q8IWD4 279 aaPredicted RBP15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 KRT222Q8N1A0 295 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 KIAA1524Q8TCG1 905 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 ZKSCAN3Q9BRR0 538 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 DYNC1I1O14576 645 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 SNX16P57768 344 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 MSL1Q68DK7 614 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 CCDC114Q96M63 670 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 CCDC160A6NGH7 325 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 ANKRD2Q9GZV1 360 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 ODF2LQ9ULJ1 636 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 PPIP5K1Q6PFW1 1433 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 SH3BP5O60239 455 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 TIGD1Q96MW7 591 aa15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 MAK16Q9BXY0 300 aaKnown RBP15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 V9GYY5 206 aaPredicted RBP15.34■□□□□ 0.05
CX3CL1-204ENST00000565912 PTPDC1A2A3K4 754 aa15.33■□□□□ 0.05
CX3CL1-204ENST00000565912 SAP30BPQ9UHR5 308 aaKnown RBP15.33■□□□□ 0.05
CX3CL1-204ENST00000565912 ANAPC4Q9UJX5 808 aa15.33■□□□□ 0.05
CX3CL1-204ENST00000565912 ATP2A2P16615 1042 aaKnown RBP15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 ANKS4BQ8N8V4 417 aa15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 LINS1Q8NG48 757 aa15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 GOLGA1Q92805 767 aa15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 PCDHB15Q9Y5E8 787 aa15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 PARP1P09874 1014 aaKnown RBP15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 KCNK9Q9NPC2 374 aa15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 ZNF569Q5MCW4 686 aa15.33■□□□□ 0.04
CX3CL1-204ENST00000565912 KRT5P13647 590 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 TYRO3Q06418 890 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 BIRC3Q13489 604 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 CREB3L3Q68CJ9 461 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 RALGAPBQ86X10 1494 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 AK2P54819 239 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 MTHFSDQ2M296 383 aaKnown RBP15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 CFAP57Q96MR6 1250 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 ZHX1Q9UKY1 873 aaPredicted RBP15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 EIF4A2Q14240 407 aaKnown RBP15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 CFAP58Q5T655 872 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 SMC1BQ8NDV3 1235 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 GJA3Q9Y6H8 435 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 PRAG1Q86YV5 1406 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 LETM2Q2VYF4 491 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 CCDC14Q49A88 953 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 TTC41PQ6P2S7 1318 aa15.32■□□□□ 0.04
CX3CL1-204ENST00000565912 SLU7O95391 586 aaKnown RBP15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 TCOF1Q13428 1488 aaKnown RBP15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 RASA3Q14644 834 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 IQUBQ8NA54 791 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 MAPKBP1O60336 1514 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 TPD52P55327 224 aaPredicted RBP15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 NBPF14Q5TI25 921 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 GPCPD1Q9NPB8 672 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 LUC7L2Q9Y383 392 aaKnown RBP15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 RPL13P26373 211 aaKnown RBP15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 ZNF174Q15697 407 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 CFAP157Q5JU67 520 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 TTC6Q86TZ1 520 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 LEO1Q8WVC0 666 aaPredicted RBP15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 IFNKQ9P0W0 207 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 MTRF1LQ9UGC7 380 aaKnown RBP15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 FRMD4BQ9Y2L6 1034 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 VWA3AA6NCI4 1184 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 FNBP1Q96RU3 617 aa15.31■□□□□ 0.04
CX3CL1-204ENST00000565912 CHMP2AO43633 222 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 RHOXF2BP0C7M4 288 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 DNAJC21Q5F1R6 531 aaKnown RBP15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 DHX32Q7L7V1 743 aaKnown RBP15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 RHOXF2Q9BQY4 288 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 SV2BQ7L1I2 683 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 CCDC65Q8IXS2 484 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 PROCA1Q8NCQ7 364 aaPredicted RBP15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 MTUS1Q9ULD2 1270 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 CALCOCO2Q13137 446 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 WDR44Q5JSH3 913 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 CCDC121Q6ZUS5 278 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 GTPBP4Q9BZE4 634 aaKnown RBP15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 RBM28Q9NW13 759 aaKnown RBP15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 MBD4O95243 580 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 DAAM2Q86T65 1068 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 RBM17Q96I25 401 aaKnown RBP15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 TRAF5O00463 557 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 ZEB2O60315 1214 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 ZWINTO95229 277 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 FCHSD1Q86WN1 690 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
CX3CL1-204ENST00000565912 BRAPQ7Z569 592 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 CPLX4Q7Z7G2 160 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 TEX11Q8IYF3 940 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 NOD1Q9Y239 953 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 INF2Q27J81 1249 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms