RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 IARSP41252 1262 aaKnown RBP10.98□□□□□ -0.65
CDH13-207ENST00000565636 QPCTQ16769 361 aa10.98□□□□□ -0.65
CDH13-207ENST00000565636 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
CDH13-207ENST00000565636 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
CDH13-207ENST00000565636 CRAMP1Q96RY5 1269 aa10.98□□□□□ -0.65
CDH13-207ENST00000565636 RNF123Q5XPI4 1314 aa10.98□□□□□ -0.65
CDH13-207ENST00000565636 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
CDH13-207ENST00000565636 UPP2O95045 317 aa10.97□□□□□ -0.65
CDH13-207ENST00000565636 TIMP2P16035 220 aa10.97□□□□□ -0.65
CDH13-207ENST00000565636 IRF7Q92985 503 aa10.97□□□□□ -0.65
CDH13-207ENST00000565636 ANKRD36CQ5JPF3 1778 aa10.96□□□□□ -0.65
CDH13-207ENST00000565636 MAP3K15Q6ZN16 1313 aa10.96□□□□□ -0.65
CDH13-207ENST00000565636 EPHX2P34913 555 aa10.96□□□□□ -0.65
CDH13-207ENST00000565636 CTCFP49711 727 aaPredicted RBP10.96□□□□□ -0.65
CDH13-207ENST00000565636 EIF6P56537 245 aaKnown RBP10.96□□□□□ -0.65
CDH13-207ENST00000565636 MAP2K1Q02750 393 aaPredicted RBP10.96□□□□□ -0.65
CDH13-207ENST00000565636 PARP10Q53GL7 1025 aa10.96□□□□□ -0.65
CDH13-207ENST00000565636 SLC10A5Q5PT55 438 aa10.96□□□□□ -0.65
CDH13-207ENST00000565636 SYNE4Q8N205 404 aa10.96□□□□□ -0.65
CDH13-207ENST00000565636 GPKOWQ92917 476 aaPredicted RBP eCLIP10.96□□□□□ -0.65
CDH13-207ENST00000565636 TMX4Q9H1E5 349 aaPredicted RBP10.96□□□□□ -0.65
CDH13-207ENST00000565636 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
CDH13-207ENST00000565636 DEFB115Q30KQ5 88 aa10.95□□□□□ -0.66
CDH13-207ENST00000565636 KIF6Q6ZMV9 814 aa10.95□□□□□ -0.66
CDH13-207ENST00000565636 USP50Q70EL3 339 aaPredicted RBP10.95□□□□□ -0.66
CDH13-207ENST00000565636 MCM10Q7L590 875 aa10.95□□□□□ -0.66
CDH13-207ENST00000565636 PPP1R42Q7Z4L9 355 aa10.95□□□□□ -0.66
CDH13-207ENST00000565636 ZNF34Q8IZ26 560 aa10.95□□□□□ -0.66
CDH13-207ENST00000565636 CNTROBQ8N137 903 aa10.95□□□□□ -0.66
CDH13-207ENST00000565636 AIDAQ96BJ3 306 aa10.95□□□□□ -0.66
CDH13-207ENST00000565636 RBM17Q96I25 401 aaKnown RBP10.95□□□□□ -0.66
CDH13-207ENST00000565636 FAM181BA6NEQ2 426 aa10.94□□□□□ -0.66
CDH13-207ENST00000565636 BBOX1O75936 387 aa10.94□□□□□ -0.66
CDH13-207ENST00000565636 ZIC2O95409 532 aaPredicted RBP10.94□□□□□ -0.66
CDH13-207ENST00000565636 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
CDH13-207ENST00000565636 SUPT20HQ8NEM7 779 aa10.94□□□□□ -0.66
CDH13-207ENST00000565636 HHIPL1Q96JK4 782 aa10.94□□□□□ -0.66
CDH13-207ENST00000565636 POLR3EQ9NVU0 708 aa10.94□□□□□ -0.66
CDH13-207ENST00000565636 CDHR2Q9BYE9 1310 aa10.93□□□□□ -0.66
CDH13-207ENST00000565636 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
CDH13-207ENST00000565636 ECE1P42892 770 aa10.93□□□□□ -0.66
CDH13-207ENST00000565636 HLFQ16534 295 aa10.93□□□□□ -0.66
CDH13-207ENST00000565636 TMC4Q7Z404 712 aa10.93□□□□□ -0.66
CDH13-207ENST00000565636 RPGRQ92834 1020 aaKnown RBP10.93□□□□□ -0.66
CDH13-207ENST00000565636 NLRP3Q96P20 1036 aa10.93□□□□□ -0.66
CDH13-207ENST00000565636 PURBQ96QR8 312 aaKnown RBP10.93□□□□□ -0.66
CDH13-207ENST00000565636 PLEKHF1Q96S99 279 aa10.93□□□□□ -0.66
CDH13-207ENST00000565636 RTFDC1Q9BY42 306 aaPredicted RBP10.93□□□□□ -0.66
CDH13-207ENST00000565636 ZNF277Q9NRM2 450 aaPredicted RBP10.93□□□□□ -0.66
CDH13-207ENST00000565636 PRAMEF22A3QJZ6 481 aa10.92□□□□□ -0.66
CDH13-207ENST00000565636 MAP2K2P36507 400 aa10.92□□□□□ -0.66
CDH13-207ENST00000565636 VEGFBP49765 207 aa10.92□□□□□ -0.66
CDH13-207ENST00000565636 NFE2L2Q16236 605 aa10.92□□□□□ -0.66
CDH13-207ENST00000565636 HSP90AB3PQ58FF7 597 aa10.92□□□□□ -0.66
CDH13-207ENST00000565636 RTL5Q5HYW3 569 aaPredicted RBP10.92□□□□□ -0.66
CDH13-207ENST00000565636 MKRN1Q9UHC7 482 aaKnown RBP10.92□□□□□ -0.66
CDH13-207ENST00000565636 PGAP2Q9UHJ9 254 aa10.92□□□□□ -0.66
CDH13-207ENST00000565636 CA12O43570 354 aa10.91□□□□□ -0.66
CDH13-207ENST00000565636 SP8Q8IXZ3 490 aa10.91□□□□□ -0.66
CDH13-207ENST00000565636 KLF16Q9BXK1 252 aaPredicted RBP10.91□□□□□ -0.66
CDH13-207ENST00000565636 ATP6V0A2Q9Y487 856 aa10.91□□□□□ -0.66
CDH13-207ENST00000565636 MAP4K5Q9Y4K4 846 aa10.91□□□□□ -0.66
CDH13-207ENST00000565636 WDR33Q9C0J8 1336 aaKnown RBP10.9□□□□□ -0.66
CDH13-207ENST00000565636 ZNF541Q9H0D2 1346 aa10.9□□□□□ -0.66
CDH13-207ENST00000565636 MAGEB6P1A0A0J9YX57 407 aa10.9□□□□□ -0.66
CDH13-207ENST00000565636 FOXN1O15353 648 aa10.9□□□□□ -0.66
CDH13-207ENST00000565636 LMOD3Q0VAK6 560 aa10.9□□□□□ -0.66
CDH13-207ENST00000565636 DCTN1Q14203 1278 aa10.9□□□□□ -0.66
CDH13-207ENST00000565636 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
CDH13-207ENST00000565636 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
CDH13-207ENST00000565636 VASH1Q7L8A9 365 aaPredicted RBP10.9□□□□□ -0.66
CDH13-207ENST00000565636 DDX21Q9NR30 783 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDH13-207ENST00000565636 POLR2AP24928 1970 aaKnown RBP10.9□□□□□ -0.66
CDH13-207ENST00000565636 H3BM21 787 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 MAN1A2O60476 641 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 NTSR2O95665 410 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 GRM5P41594 1212 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 TNIP1Q15025 636 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 SUSD4Q5VX71 490 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 SH3RF1Q7Z6J0 888 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
CDH13-207ENST00000565636 LARGE2Q8N3Y3 721 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 ITPKCQ96DU7 683 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 DDRGK1Q96HY6 314 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 UTP14AQ9BVJ6 771 aaKnown RBP10.89□□□□□ -0.67
CDH13-207ENST00000565636 C1QTNF2Q9BXJ5 285 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 ADARB2Q9NS39 739 aaKnown RBP10.89□□□□□ -0.67
CDH13-207ENST00000565636 ZNRF3Q9ULT6 936 aa10.89□□□□□ -0.67
CDH13-207ENST00000565636 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
CDH13-207ENST00000565636 MAPK8IP3Q9UPT6 1336 aa10.88□□□□□ -0.67
CDH13-207ENST00000565636 THSD7BQ9C0I4 1608 aa10.88□□□□□ -0.67
CDH13-207ENST00000565636 PIP4K2AP48426 406 aaPredicted RBP10.88□□□□□ -0.67
CDH13-207ENST00000565636 RALBP1Q15311 655 aa10.88□□□□□ -0.67
CDH13-207ENST00000565636 NIM1KQ8IY84 436 aa10.88□□□□□ -0.67
CDH13-207ENST00000565636 CHMP4AQ9BY43 222 aa10.88□□□□□ -0.67
CDH13-207ENST00000565636 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
CDH13-207ENST00000565636 NR3C2P08235 984 aa10.87□□□□□ -0.67
CDH13-207ENST00000565636 HOXB7P09629 217 aa10.87□□□□□ -0.67
CDH13-207ENST00000565636 BMP2P12643 396 aa10.87□□□□□ -0.67
CDH13-207ENST00000565636 HSP90B1P14625 803 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms