RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 C7orf43Q8WVR3 580 aa11.21□□□□□ -0.61
CNEP1R1-206ENST00000565556 SGIP1Q9BQI5 828 aa11.21□□□□□ -0.61
CNEP1R1-206ENST00000565556 CD2APQ9Y5K6 639 aa11.21□□□□□ -0.61
CNEP1R1-206ENST00000565556 DUOX1Q9NRD9 1551 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 A0A0G2JLW4 131 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 PDE6AP16499 860 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 KCNA3P22001 575 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 ZNF445P59923 1031 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 HSP90AA2PQ14568 343 aaPredicted RBP11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 SOGA3Q5TF21 947 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 SLC51AQ86UW1 340 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 MAP4K1Q92918 833 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 RTFDC1Q9BY42 306 aaPredicted RBP11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 COA1Q9GZY4 146 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 CWC22Q9HCG8 908 aaKnown RBP11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 CD209Q9NNX6 404 aa11.21□□□□□ -0.62
CNEP1R1-206ENST00000565556 SALL1Q9NSC2 1324 aa11.2□□□□□ -0.62
CNEP1R1-206ENST00000565556 COL1A1P02452 1464 aaPredicted RBP11.2□□□□□ -0.62
CNEP1R1-206ENST00000565556 CCDC88AQ3V6T2 1871 aa11.2□□□□□ -0.62
CNEP1R1-206ENST00000565556 HSPA4P34932 840 aa11.2□□□□□ -0.62
CNEP1R1-206ENST00000565556 ZSCAN30Q86W11 494 aa11.2□□□□□ -0.62
CNEP1R1-206ENST00000565556 RTKN2Q8IZC4 609 aa11.2□□□□□ -0.62
CNEP1R1-206ENST00000565556 OSBP2Q969R2 916 aa11.2□□□□□ -0.62
CNEP1R1-206ENST00000565556 PIM2Q9P1W9 311 aa11.2□□□□□ -0.62
CNEP1R1-206ENST00000565556 ABCF2Q9UG63 623 aa11.2□□□□□ -0.62
CNEP1R1-206ENST00000565556 MAST3O60307 1309 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 ZNF532Q9HCE3 1301 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 TCRBV5S4A2TA0A5A2 114 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 G3V3G9 751 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 ST18O60284 1047 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 PTH1RQ03431 593 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 CHAF1AQ13111 956 aaPredicted RBP11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 OLFM4Q6UX06 510 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 ZNF589Q86UQ0 364 aaPredicted RBP11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 MAGEB6Q8N7X4 407 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 IL17RAQ96F46 866 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 GPR101Q96P66 508 aaPredicted RBP11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 SEC62Q99442 399 aaKnown RBP11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 DSCC1Q9BVC3 393 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 RAI14Q9P0K7 980 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 WWC3Q9ULE0 1092 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 U3KPZ7 1027 aaPredicted RBP11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 KIAA1551Q9HCM1 1747 aa11.19□□□□□ -0.62
CNEP1R1-206ENST00000565556 PTGER2P43116 358 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 HS1BP3Q53T59 392 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 CCDC93Q567U6 631 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 RNF20Q5VTR2 975 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 TBC1D22AQ8WUA7 517 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 RBM8AQ9Y5S9 174 aaKnown RBP11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 MAST2Q6P0Q8 1798 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 M0R2C6 588 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 C21orf2O43822 256 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 CHGBP05060 677 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 ZKSCAN1P17029 563 aaPredicted RBP11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 NECTIN1Q15223 517 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 MCTP1Q6DN14 999 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 CCDC129Q6ZRS4 1044 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 ILDR2Q71H61 639 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 KCNB2Q92953 911 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 PUS7LQ9H0K6 701 aaKnown RBP11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 VPS33BQ9H267 617 aa11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
CNEP1R1-206ENST00000565556 FAM205AQ6ZU69 1335 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 SNED1Q8TER0 1413 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 GPAA1O43292 621 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 CYP7A1P22680 504 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 MSNP26038 577 aaKnown RBP11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 GSTO1P78417 241 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 SLFNL1Q499Z3 407 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 DALRD3Q5D0E6 543 aaKnown RBP11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 NAA16Q6N069 864 aaPredicted RBP11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 PODNQ7Z5L7 613 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 AIDAQ96BJ3 306 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 PSMD1Q99460 953 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 PPP1R1BQ9UD71 204 aaPredicted RBP11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 CTNNA3Q9UI47 895 aa11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 BRCA1P38398 1863 aaKnown RBP11.17□□□□□ -0.62
CNEP1R1-206ENST00000565556 HSPD1P10809 573 aaKnown RBP11.16□□□□□ -0.62
CNEP1R1-206ENST00000565556 GNAT2P19087 354 aa11.16□□□□□ -0.62
CNEP1R1-206ENST00000565556 SUGT1Q9Y2Z0 365 aa11.16□□□□□ -0.62
CNEP1R1-206ENST00000565556 LDHCP07864 332 aa11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 MECOMQ03112 1051 aa11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 KIAA2012Q0VF49 1180 aa11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 ZSCAN23Q3MJ62 389 aa11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 TSGA10IPQ3SY00 556 aa11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 CREB3L3Q68CJ9 461 aa11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 CAVIN1Q6NZI2 390 aaKnown RBP11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 DZIP1Q86YF9 867 aaKnown RBP11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 NSUN4Q96CB9 384 aaKnown RBP11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 STRBPQ96SI9 672 aaKnown RBP11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 LMBRD1Q9NUN5 540 aa11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 CHD4Q14839 1912 aa11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 RPAP1Q9BWH6 1393 aaPredicted RBP11.15□□□□□ -0.62
CNEP1R1-206ENST00000565556 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms