RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 MAST3O60307 1309 aa16.86■□□□□ 0.29
CNOT1-206ENST00000564557 SEMA3EO15041 775 aa16.85■□□□□ 0.29
CNOT1-206ENST00000564557 HUNKP57058 714 aa16.85■□□□□ 0.29
CNOT1-206ENST00000564557 TTLL12Q14166 644 aaPredicted RBP16.85■□□□□ 0.29
CNOT1-206ENST00000564557 PDE3AQ14432 1141 aa16.85■□□□□ 0.29
CNOT1-206ENST00000564557 CCDC102BQ68D86 513 aa16.85■□□□□ 0.29
CNOT1-206ENST00000564557 SAPCD2Q86UD0 394 aa16.85■□□□□ 0.29
CNOT1-206ENST00000564557 XAGE2Q96GT9 111 aa16.85■□□□□ 0.29
CNOT1-206ENST00000564557 SCAF8Q9UPN6 1271 aaKnown RBP16.85■□□□□ 0.29
CNOT1-206ENST00000564557 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
CNOT1-206ENST00000564557 ZNF646O15015 1829 aaPredicted RBP16.84■□□□□ 0.29
CNOT1-206ENST00000564557 CLRN2A0PK11 232 aa16.84■□□□□ 0.29
CNOT1-206ENST00000564557 HMMRO75330 724 aa16.84■□□□□ 0.29
CNOT1-206ENST00000564557 ADORA1P30542 326 aa16.84■□□□□ 0.29
CNOT1-206ENST00000564557 PHKA1P46020 1223 aa16.84■□□□□ 0.29
CNOT1-206ENST00000564557 CRKP46108 304 aa16.84■□□□□ 0.29
CNOT1-206ENST00000564557 ZGPATQ8N5A5 531 aaKnown RBP16.84■□□□□ 0.29
CNOT1-206ENST00000564557 TEKT1Q969V4 418 aa16.84■□□□□ 0.29
CNOT1-206ENST00000564557 ZBED3Q96IU2 234 aaPredicted RBP16.84■□□□□ 0.29
CNOT1-206ENST00000564557 CAPNS2Q96L46 248 aa16.84■□□□□ 0.29
CNOT1-206ENST00000564557 PRMT6Q96LA8 375 aaPredicted RBP16.84■□□□□ 0.29
CNOT1-206ENST00000564557 HDLBPQ00341 1268 aaKnown RBP16.83■□□□□ 0.28
CNOT1-206ENST00000564557 TNFAIP1Q13829 316 aa16.83■□□□□ 0.28
CNOT1-206ENST00000564557 CEP350Q5VT06 3117 aa16.83■□□□□ 0.28
CNOT1-206ENST00000564557 CYP4F22Q6NT55 531 aa16.83■□□□□ 0.28
CNOT1-206ENST00000564557 CEP85Q6P2H3 762 aa16.83■□□□□ 0.28
CNOT1-206ENST00000564557 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
CNOT1-206ENST00000564557 AIDAQ96BJ3 306 aa16.83■□□□□ 0.28
CNOT1-206ENST00000564557 HHIPL1Q96JK4 782 aa16.83■□□□□ 0.28
CNOT1-206ENST00000564557 LDHBP07195 334 aaKnown RBP16.82■□□□□ 0.28
CNOT1-206ENST00000564557 FKBP1BP68106 108 aa16.82■□□□□ 0.28
CNOT1-206ENST00000564557 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
CNOT1-206ENST00000564557 PRAMEF18Q5VWM3 479 aa16.82■□□□□ 0.28
CNOT1-206ENST00000564557 ERC1Q8IUD2 1116 aa16.82■□□□□ 0.28
CNOT1-206ENST00000564557 DEFB129Q9H1M3 183 aa16.82■□□□□ 0.28
CNOT1-206ENST00000564557 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
CNOT1-206ENST00000564557 PCDHAC2Q9Y5I4 1007 aa16.82■□□□□ 0.28
CNOT1-206ENST00000564557 MYH13Q9UKX3 1938 aa16.82■□□□□ 0.28
CNOT1-206ENST00000564557 TNNI2P48788 182 aa16.81■□□□□ 0.28
CNOT1-206ENST00000564557 CCDC158Q5M9N0 1113 aa16.81■□□□□ 0.28
CNOT1-206ENST00000564557 BEGAINQ9BUH8 593 aa16.81■□□□□ 0.28
CNOT1-206ENST00000564557 MRIQ9BWK5 157 aa16.81■□□□□ 0.28
CNOT1-206ENST00000564557 TDRD3Q9H7E2 651 aaKnown RBP16.81■□□□□ 0.28
CNOT1-206ENST00000564557 GPR108Q9NPR9 543 aa16.81■□□□□ 0.28
CNOT1-206ENST00000564557 ABCF2Q9UG63 623 aa16.81■□□□□ 0.28
CNOT1-206ENST00000564557 NOP58Q9Y2X3 529 aaKnown RBP16.81■□□□□ 0.28
CNOT1-206ENST00000564557 PPP2R3BQ9Y5P8 575 aa16.81■□□□□ 0.28
CNOT1-206ENST00000564557 UQCRFS1P1P0C7P4 283 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 HSPA1AP0DMV8 641 aaKnown RBP16.8■□□□□ 0.28
CNOT1-206ENST00000564557 HSPA1BP0DMV9 641 aaKnown RBP16.8■□□□□ 0.28
CNOT1-206ENST00000564557 ZNF157P51786 506 aaPredicted RBP16.8■□□□□ 0.28
CNOT1-206ENST00000564557 MAP2K1Q02750 393 aaPredicted RBP16.8■□□□□ 0.28
CNOT1-206ENST00000564557 GRIK5Q16478 980 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 SUPT20HL1Q3ZLR7 823 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 TNNI3KQ59H18 835 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 TTC39AQ5SRH9 613 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 SPTY2D1Q68D10 685 aaPredicted RBP16.8■□□□□ 0.28
CNOT1-206ENST00000564557 RGMBQ6NW40 437 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 ARMC9Q7Z3E5 817 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 CCDC102AQ96A19 550 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 ZBTB40Q9NUA8 1239 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 ZNF70Q9UC06 446 aaPredicted RBP16.8■□□□□ 0.28
CNOT1-206ENST00000564557 FPGT-TNNI3KV9GXZ4 949 aa16.8■□□□□ 0.28
CNOT1-206ENST00000564557 MAP2K2P36507 400 aa16.79■□□□□ 0.28
CNOT1-206ENST00000564557 C20orf194Q5TEA3 1177 aa16.79■□□□□ 0.28
CNOT1-206ENST00000564557 HHIPL2Q6UWX4 724 aa16.79■□□□□ 0.28
CNOT1-206ENST00000564557 SLF2Q8IX21 1173 aa16.79■□□□□ 0.28
CNOT1-206ENST00000564557 EXOC6BQ9Y2D4 811 aa16.79■□□□□ 0.28
CNOT1-206ENST00000564557 COL1A1P02452 1464 aaPredicted RBP16.79■□□□□ 0.28
CNOT1-206ENST00000564557 ARAP2Q8WZ64 1704 aa16.79■□□□□ 0.28
CNOT1-206ENST00000564557 SALL1Q9NSC2 1324 aa16.78■□□□□ 0.28
CNOT1-206ENST00000564557 TCP10L2B9ZVM9 353 aa16.78■□□□□ 0.28
CNOT1-206ENST00000564557 PPP1R12BO60237 982 aaPredicted RBP16.78■□□□□ 0.28
CNOT1-206ENST00000564557 RASGRF1Q13972 1273 aa16.78■□□□□ 0.28
CNOT1-206ENST00000564557 PRKG1Q13976 671 aa16.78■□□□□ 0.28
CNOT1-206ENST00000564557 DZIP1Q86YF9 867 aaKnown RBP16.78■□□□□ 0.28
CNOT1-206ENST00000564557 ZDHHC15Q96MV8 337 aa16.78■□□□□ 0.28
CNOT1-206ENST00000564557 PDS5AQ29RF7 1337 aaKnown RBP16.77■□□□□ 0.28
CNOT1-206ENST00000564557 PRDX5P30044 214 aa16.77■□□□□ 0.28
CNOT1-206ENST00000564557 NOGQ13253 232 aa16.77■□□□□ 0.28
CNOT1-206ENST00000564557 RASA3Q14644 834 aa16.77■□□□□ 0.28
CNOT1-206ENST00000564557 ERICH6Q7L0X2 663 aa16.77■□□□□ 0.28
CNOT1-206ENST00000564557 SPATA5Q8NB90 893 aa16.77■□□□□ 0.28
CNOT1-206ENST00000564557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.77■□□□□ 0.28
CNOT1-206ENST00000564557 ECM29Q5VYK3 1845 aa16.77■□□□□ 0.27
CNOT1-206ENST00000564557 UBE2Q2LH0YL09 131 aa16.76■□□□□ 0.27
CNOT1-206ENST00000564557 APBB1O00213 710 aa16.76■□□□□ 0.27
CNOT1-206ENST00000564557 AOC2O75106 756 aa16.76■□□□□ 0.27
CNOT1-206ENST00000564557 DBNDD2Q9BQY9 259 aa16.76■□□□□ 0.27
CNOT1-206ENST00000564557 CCDC8Q9H0W5 538 aaPredicted RBP16.76■□□□□ 0.27
CNOT1-206ENST00000564557 BCL11AQ9H165 835 aa16.76■□□□□ 0.27
CNOT1-206ENST00000564557 ANGEL1Q9UNK9 670 aaKnown RBP16.76■□□□□ 0.27
CNOT1-206ENST00000564557 ARID4AP29374 1257 aaPredicted RBP16.75■□□□□ 0.27
CNOT1-206ENST00000564557 DIXDC1Q155Q3 683 aa16.75■□□□□ 0.27
CNOT1-206ENST00000564557 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
CNOT1-206ENST00000564557 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.75■□□□□ 0.27
CNOT1-206ENST00000564557 PAPPA2Q9BXP8 1791 aa16.74■□□□□ 0.27
CNOT1-206ENST00000564557 PITPNM1O00562 1244 aa16.74■□□□□ 0.27
CNOT1-206ENST00000564557 RAB11FIP3O75154 756 aa16.74■□□□□ 0.27
CNOT1-206ENST00000564557 RRP1P56182 461 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms