RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 OXCT2Q9BYC2 517 aaPredicted RBP7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 CRISPLD1Q9H336 500 aa7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 NDFIP2Q9NV92 336 aa7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 SERTAD1Q9UHV2 236 aa7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 PHF24Q9UPV7 400 aa7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 PCDHGA11Q9Y5H2 935 aa7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 DNMT3AQ9Y6K1 912 aaPredicted RBP7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 NSD3Q9BZ95 1437 aa7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 C5P01031 1676 aa7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 PCDH11XQ9BZA7 1347 aa7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 PCDH11YQ9BZA8 1340 aa7.25□□□□□ -1.25
TUBGCP4-209ENST00000564511 LOC102724428A0A0B4J2F2 783 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 BNIP3LO60238 219 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 DPEP1P16444 411 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 SIK1P57059 783 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 C1orf229Q6ZS94 237 aaPredicted RBP7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 ZNF295-AS1Q8N0V1 137 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 NLGN1Q8N2Q7 840 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 BEND7Q8N7W2 519 aaPredicted RBP7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 LINC00116Q8NCU8 138 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 RRAGCQ9HB90 399 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 USP54Q70EL1 1684 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 KDM2BQ8NHM5 1336 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 C4BP0C0L5 1744 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 PXDNLA1KZ92 1463 aa7.24□□□□□ -1.25
TUBGCP4-209ENST00000564511 FAM208AQ9UK61 1670 aaKnown RBP7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 DLL1O00548 723 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 C2CD2LO14523 706 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 SKIP12755 728 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 TMF1P82094 1093 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 MTFR1Q15390 333 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 HSP90AB2PQ58FF8 381 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 TRAPPC3LQ5T215 181 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 TBC1D9Q6ZT07 1266 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 ABHD17AQ96GS6 310 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 CARD11Q9BXL7 1154 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 NIFKQ9BYG3 293 aaKnown RBP7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 ATXN7L1Q9ULK2 861 aaPredicted RBP7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 USP3Q9Y6I4 520 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 WDR90Q96KV7 1748 aa7.23□□□□□ -1.25
TUBGCP4-209ENST00000564511 SMG6Q86US8 1419 aaKnown RBP7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 A6NJY4 79 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 PHF20L1A8MW92 1017 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 SHISA8B8ZZ34 492 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 CDK2AP1O14519 115 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 ATP4AP20648 1035 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 CTBSQ01459 385 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 ITPK1Q13572 414 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 AIDAQ96BJ3 306 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 ZCCHC2Q9C0B9 1178 aaKnown RBP7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 GGNBP2Q9H3C7 697 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 CCDC87Q9NVE4 849 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 DNAAF2Q9NVR5 837 aaKnown RBP7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 TMOD3Q9NYL9 352 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 RNF181Q9P0P0 153 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 ASAP1Q9ULH1 1129 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 IQSEC3Q9UPP2 1182 aaPredicted RBP7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 RTCBQ9Y3I0 505 aaKnown RBP7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 PARP3Q9Y6F1 533 aa7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 CICQ96RK0 1608 aaPredicted RBP7.22□□□□□ -1.25
TUBGCP4-209ENST00000564511 HSPA1AP0DMV8 641 aaKnown RBP7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 HSPA1BP0DMV9 641 aaKnown RBP7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 KCNA3P22001 575 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 FGFR3P22607 806 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 SUZ12Q15022 739 aaKnown RBP7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 EML3Q32P44 896 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 GPAT2Q6NUI2 795 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 GALNT6Q8NCL4 622 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 SMC1BQ8NDV3 1235 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 C1orf216Q8TAB5 229 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 PUS7Q96PZ0 661 aaKnown RBP7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 PIM2Q9P1W9 311 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 SPG7Q9UQ90 795 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 PITPNM2Q9BZ72 1349 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 KCPQ6ZWJ8 1503 aa7.21□□□□□ -1.26
TUBGCP4-209ENST00000564511 RTL1A6NKG5 1358 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 PLEKHG2Q9H7P9 1386 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 RGPD2P0DJD1 1756 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 TAF1LQ8IZX4 1826 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 FYB1O15117 783 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 LZTS3O60299 673 aaPredicted RBP7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 BMP4P12644 408 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 RFC4P35249 363 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 SNRPNP63162 240 aaKnown RBP7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 DALRD3Q5D0E6 543 aaKnown RBP7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 NFATC2IPQ8NCF5 419 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 EDARADDQ8WWZ3 215 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 DCAF5Q96JK2 942 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 GDF2Q9UK05 429 aaPredicted RBP7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 HCN2Q9UL51 889 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 NOD1Q9Y239 953 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 PCDHGC4Q9Y5F7 938 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 TOGARAM1Q9Y4F4 1720 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 INSRP06213 1382 aa7.2□□□□□ -1.26
TUBGCP4-209ENST00000564511 UBR3Q6ZT12 1888 aa7.19□□□□□ -1.26
TUBGCP4-209ENST00000564511 C10orf71Q711Q0 1435 aa7.19□□□□□ -1.26
TUBGCP4-209ENST00000564511 POM121CA8CG34 1229 aa7.19□□□□□ -1.26
TUBGCP4-209ENST00000564511 GYS1P13807 737 aa7.19□□□□□ -1.26
TUBGCP4-209ENST00000564511 GTF2IP78347 998 aa7.19□□□□□ -1.26
TUBGCP4-209ENST00000564511 FOXK2Q01167 660 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms