RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 OTOFQ9HC10 1997 aa17.46■□□□□ 0.39
KNOP1-202ENST00000564480 UBE4AQ14139 1066 aa17.45■□□□□ 0.38
KNOP1-202ENST00000564480 INTS3Q68E01 1043 aaKnown RBP17.45■□□□□ 0.38
KNOP1-202ENST00000564480 ARMC5Q96C12 935 aa17.45■□□□□ 0.38
KNOP1-202ENST00000564480 EFCC1Q9HA90 598 aa17.45■□□□□ 0.38
KNOP1-202ENST00000564480 IQSEC3Q9UPP2 1182 aaPredicted RBP17.45■□□□□ 0.38
KNOP1-202ENST00000564480 NBPF7P0C2Y1 421 aaPredicted RBP17.44■□□□□ 0.38
KNOP1-202ENST00000564480 CRKP46108 304 aa17.44■□□□□ 0.38
KNOP1-202ENST00000564480 CACNB3P54284 484 aa17.44■□□□□ 0.38
KNOP1-202ENST00000564480 VGLL4Q14135 290 aa17.44■□□□□ 0.38
KNOP1-202ENST00000564480 OTUD7BQ6GQQ9 843 aa17.44■□□□□ 0.38
KNOP1-202ENST00000564480 SLC4A10Q6U841 1118 aa17.44■□□□□ 0.38
KNOP1-202ENST00000564480 FAM43AQ8N2R8 423 aa17.44■□□□□ 0.38
KNOP1-202ENST00000564480 MRS2Q9HD23 443 aa17.44■□□□□ 0.38
KNOP1-202ENST00000564480 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
KNOP1-202ENST00000564480 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
KNOP1-202ENST00000564480 CENPFP49454 3210 aa17.43■□□□□ 0.38
KNOP1-202ENST00000564480 ALDH1L1O75891 902 aa17.43■□□□□ 0.38
KNOP1-202ENST00000564480 FBXO33Q7Z6M2 555 aa17.43■□□□□ 0.38
KNOP1-202ENST00000564480 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.43■□□□□ 0.38
KNOP1-202ENST00000564480 MAP3K9P80192 1104 aa17.42■□□□□ 0.38
KNOP1-202ENST00000564480 TNFAIP1Q13829 316 aa17.42■□□□□ 0.38
KNOP1-202ENST00000564480 LRRC24Q50LG9 513 aa17.42■□□□□ 0.38
KNOP1-202ENST00000564480 HABP4Q5JVS0 413 aaKnown RBP17.42■□□□□ 0.38
KNOP1-202ENST00000564480 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
KNOP1-202ENST00000564480 CCL15-CCL14A0A0B4J2E2 113 aa17.41■□□□□ 0.38
KNOP1-202ENST00000564480 CCL15Q16663 113 aa17.41■□□□□ 0.38
KNOP1-202ENST00000564480 OTUD5Q96G74 571 aa17.41■□□□□ 0.38
KNOP1-202ENST00000564480 PTCH2Q9Y6C5 1203 aa17.41■□□□□ 0.38
KNOP1-202ENST00000564480 KIAA0100Q14667 2235 aaKnown RBP17.4■□□□□ 0.38
KNOP1-202ENST00000564480 CHAF1AQ13111 956 aaPredicted RBP17.4■□□□□ 0.38
KNOP1-202ENST00000564480 TAF1CQ15572 869 aaPredicted RBP17.4■□□□□ 0.38
KNOP1-202ENST00000564480 ANKRD44Q8N8A2 993 aa17.4■□□□□ 0.38
KNOP1-202ENST00000564480 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
KNOP1-202ENST00000564480 ZNF333Q96JL9 665 aa17.4■□□□□ 0.38
KNOP1-202ENST00000564480 ARHGAP39Q9C0H5 1083 aa17.4■□□□□ 0.38
KNOP1-202ENST00000564480 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
KNOP1-202ENST00000564480 SNCAIPQ9Y6H5 919 aa17.4■□□□□ 0.38
KNOP1-202ENST00000564480 UTYO14607 1347 aa17.4■□□□□ 0.38
KNOP1-202ENST00000564480 BRCA2P51587 3418 aa17.39■□□□□ 0.37
KNOP1-202ENST00000564480 RABL6Q3YEC7 729 aaPredicted RBP17.39■□□□□ 0.37
KNOP1-202ENST00000564480 KLHDC4Q8TBB5 520 aa17.39■□□□□ 0.37
KNOP1-202ENST00000564480 RBBP6Q7Z6E9 1792 aaKnown RBP17.38■□□□□ 0.37
KNOP1-202ENST00000564480 SPDYE5A6NIY4 337 aa17.38■□□□□ 0.37
KNOP1-202ENST00000564480 BCAMP50895 628 aa17.38■□□□□ 0.37
KNOP1-202ENST00000564480 GTF2A2P52657 109 aa17.38■□□□□ 0.37
KNOP1-202ENST00000564480 APOBEC3HQ6NTF7 200 aaKnown RBP17.38■□□□□ 0.37
KNOP1-202ENST00000564480 ZKSCAN4Q969J2 545 aaPredicted RBP17.38■□□□□ 0.37
KNOP1-202ENST00000564480 GCC1Q96CN9 775 aa17.38■□□□□ 0.37
KNOP1-202ENST00000564480 ZFYVE28Q9HCC9 887 aa17.38■□□□□ 0.37
KNOP1-202ENST00000564480 MROH5Q6ZUA9 1318 aa17.38■□□□□ 0.37
KNOP1-202ENST00000564480 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
KNOP1-202ENST00000564480 MYCP01106 439 aaPredicted RBP17.37■□□□□ 0.37
KNOP1-202ENST00000564480 TNNI2P48788 182 aa17.37■□□□□ 0.37
KNOP1-202ENST00000564480 HDLBPQ00341 1268 aaKnown RBP17.37■□□□□ 0.37
KNOP1-202ENST00000564480 CSADQ9Y600 493 aa17.37■□□□□ 0.37
KNOP1-202ENST00000564480 ZSWIM8A7E2V4 1837 aa17.37■□□□□ 0.37
KNOP1-202ENST00000564480 BTBD19C9JJ37 291 aa17.36■□□□□ 0.37
KNOP1-202ENST00000564480 IRF6O14896 467 aa17.36■□□□□ 0.37
KNOP1-202ENST00000564480 PDE8BO95263 885 aa17.36■□□□□ 0.37
KNOP1-202ENST00000564480 METTL24Q5JXM2 366 aa17.36■□□□□ 0.37
KNOP1-202ENST00000564480 TEKT1Q969V4 418 aa17.36■□□□□ 0.37
KNOP1-202ENST00000564480 ZDHHC15Q96MV8 337 aa17.36■□□□□ 0.37
KNOP1-202ENST00000564480 CTGFP29279 349 aa17.35■□□□□ 0.37
KNOP1-202ENST00000564480 SLC9C1Q4G0N8 1177 aa17.35■□□□□ 0.37
KNOP1-202ENST00000564480 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
KNOP1-202ENST00000564480 ERO1BQ86YB8 467 aa17.35■□□□□ 0.37
KNOP1-202ENST00000564480 SH3TC2Q8TF17 1288 aa17.35■□□□□ 0.37
KNOP1-202ENST00000564480 WRNIP1Q96S55 665 aa17.35■□□□□ 0.37
KNOP1-202ENST00000564480 TLR2O60603 784 aa17.34■□□□□ 0.37
KNOP1-202ENST00000564480 ECM2O94769 699 aaPredicted RBP17.34■□□□□ 0.37
KNOP1-202ENST00000564480 FGFR2P21802 821 aa17.34■□□□□ 0.37
KNOP1-202ENST00000564480 MIGA2Q7L4E1 593 aa17.34■□□□□ 0.37
KNOP1-202ENST00000564480 MRPL50Q8N5N7 158 aaKnown RBP17.34■□□□□ 0.37
KNOP1-202ENST00000564480 TBC1D22AQ8WUA7 517 aa17.34■□□□□ 0.37
KNOP1-202ENST00000564480 TMEM106CQ9BVX2 250 aa17.34■□□□□ 0.37
KNOP1-202ENST00000564480 MRIQ9BWK5 157 aa17.34■□□□□ 0.37
KNOP1-202ENST00000564480 FRAT2O75474 233 aaPredicted RBP17.33■□□□□ 0.36
KNOP1-202ENST00000564480 CETPP11597 493 aa17.33■□□□□ 0.36
KNOP1-202ENST00000564480 INPP5BP32019 993 aa17.33■□□□□ 0.36
KNOP1-202ENST00000564480 FXR1P51114 621 aaKnown RBP eCLIP17.33■□□□□ 0.36
KNOP1-202ENST00000564480 LACTBP83111 547 aaPredicted RBP17.33■□□□□ 0.36
KNOP1-202ENST00000564480 CAVIN4Q5BKX8 364 aa17.33■□□□□ 0.36
KNOP1-202ENST00000564480 FAM83AQ86UY5 434 aa17.33■□□□□ 0.36
KNOP1-202ENST00000564480 USP44Q9H0E7 712 aa17.33■□□□□ 0.36
KNOP1-202ENST00000564480 ZNF521Q96K83 1311 aa17.32■□□□□ 0.36
KNOP1-202ENST00000564480 FKBP1CQ5VVH2 108 aa17.32■□□□□ 0.36
KNOP1-202ENST00000564480 COLQQ9Y215 455 aaPredicted RBP17.32■□□□□ 0.36
KNOP1-202ENST00000564480 RFX5P48382 616 aaPredicted RBP17.31■□□□□ 0.36
KNOP1-202ENST00000564480 PPIL2Q13356 520 aa17.31■□□□□ 0.36
KNOP1-202ENST00000564480 SNAPC2Q13487 334 aa17.31■□□□□ 0.36
KNOP1-202ENST00000564480 SLC4A8Q2Y0W8 1093 aa17.31■□□□□ 0.36
KNOP1-202ENST00000564480 HHIPL2Q6UWX4 724 aa17.31■□□□□ 0.36
KNOP1-202ENST00000564480 C17orf99Q6UX52 265 aa17.31■□□□□ 0.36
KNOP1-202ENST00000564480 NBPF11Q86T75 865 aa17.31■□□□□ 0.36
KNOP1-202ENST00000564480 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
KNOP1-202ENST00000564480 MOGSQ13724 837 aa17.3■□□□□ 0.36
KNOP1-202ENST00000564480 ARHGEF6Q15052 776 aa17.3■□□□□ 0.36
KNOP1-202ENST00000564480 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.3■□□□□ 0.36
KNOP1-202ENST00000564480 CPA4Q9UI42 421 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms