RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 SHTN1A0MZ66 631 aa9.83□□□□□ -0.84
TCF4-221ENST00000563888 PIP4K2AP48426 406 aaPredicted RBP9.83□□□□□ -0.84
TCF4-221ENST00000563888 AOC3Q16853 763 aa9.83□□□□□ -0.84
TCF4-221ENST00000563888 KRT26Q7Z3Y9 468 aa9.83□□□□□ -0.84
TCF4-221ENST00000563888 NPC1L1Q9UHC9 1359 aa9.83□□□□□ -0.84
TCF4-221ENST00000563888 HTTP42858 3142 aa9.83□□□□□ -0.84
TCF4-221ENST00000563888 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
TCF4-221ENST00000563888 RAD17O75943 681 aa9.82□□□□□ -0.84
TCF4-221ENST00000563888 PDIA4P13667 645 aaKnown RBP9.82□□□□□ -0.84
TCF4-221ENST00000563888 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
TCF4-221ENST00000563888 ZNF592Q92610 1267 aa9.82□□□□□ -0.84
TCF4-221ENST00000563888 GPKOWQ92917 476 aaPredicted RBP eCLIP9.82□□□□□ -0.84
TCF4-221ENST00000563888 ZNF496Q96IT1 587 aaPredicted RBP9.82□□□□□ -0.84
TCF4-221ENST00000563888 CNOT7Q9UIV1 285 aaKnown RBP9.82□□□□□ -0.84
TCF4-221ENST00000563888 ZNRF3Q9ULT6 936 aa9.82□□□□□ -0.84
TCF4-221ENST00000563888 NIP7Q9Y221 180 aaKnown RBP eCLIP9.82□□□□□ -0.84
TCF4-221ENST00000563888 ADM5C9JUS6 153 aa9.81□□□□□ -0.84
TCF4-221ENST00000563888 H7C1D1 291 aa9.81□□□□□ -0.84
TCF4-221ENST00000563888 RGS20O76081 388 aa9.81□□□□□ -0.84
TCF4-221ENST00000563888 FBXO45P0C2W1 286 aa9.81□□□□□ -0.84
TCF4-221ENST00000563888 EN2P19622 333 aaPredicted RBP9.81□□□□□ -0.84
TCF4-221ENST00000563888 RFX1P22670 979 aa9.81□□□□□ -0.84
TCF4-221ENST00000563888 PDXDC2PQ6P474 469 aa9.81□□□□□ -0.84
TCF4-221ENST00000563888 ADAMTS19Q8TE59 1207 aa9.81□□□□□ -0.84
TCF4-221ENST00000563888 RPGRQ92834 1020 aaKnown RBP9.81□□□□□ -0.84
TCF4-221ENST00000563888 TEX13AQ9BXU3 409 aaPredicted RBP9.81□□□□□ -0.84
TCF4-221ENST00000563888 GPR25O00155 361 aa9.8□□□□□ -0.84
TCF4-221ENST00000563888 ZNF652Q9Y2D9 606 aa9.8□□□□□ -0.84
TCF4-221ENST00000563888 GPSM3Q9Y4H4 160 aa9.8□□□□□ -0.84
TCF4-221ENST00000563888 H0YGN5 161 aa9.79□□□□□ -0.84
TCF4-221ENST00000563888 KCNC4Q03721 635 aa9.79□□□□□ -0.84
TCF4-221ENST00000563888 TNIP1Q15025 636 aa9.79□□□□□ -0.84
TCF4-221ENST00000563888 TBC1D10BQ4KMP7 808 aaPredicted RBP9.79□□□□□ -0.84
TCF4-221ENST00000563888 CDCA8Q53HL2 280 aa9.79□□□□□ -0.84
TCF4-221ENST00000563888 CLEC4GQ6UXB4 293 aa9.79□□□□□ -0.84
TCF4-221ENST00000563888 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
TCF4-221ENST00000563888 DCPSQ96C86 337 aaKnown RBP9.79□□□□□ -0.84
TCF4-221ENST00000563888 PPP1R12CQ9BZL4 782 aa9.79□□□□□ -0.84
TCF4-221ENST00000563888 UNC93B1Q9H1C4 597 aa9.79□□□□□ -0.84
TCF4-221ENST00000563888 TMX4Q9H1E5 349 aaPredicted RBP9.79□□□□□ -0.84
TCF4-221ENST00000563888 KIF20BQ96Q89 1820 aa9.78□□□□□ -0.84
TCF4-221ENST00000563888 PPEF1O14829 653 aaPredicted RBP9.78□□□□□ -0.84
TCF4-221ENST00000563888 FKTNO75072 461 aa9.78□□□□□ -0.84
TCF4-221ENST00000563888 S1PR4O95977 384 aa9.78□□□□□ -0.84
TCF4-221ENST00000563888 INTS3Q68E01 1043 aaKnown RBP9.78□□□□□ -0.84
TCF4-221ENST00000563888 ZBTB33Q86T24 672 aa9.78□□□□□ -0.84
TCF4-221ENST00000563888 RASAL3Q86YV0 1011 aa9.78□□□□□ -0.84
TCF4-221ENST00000563888 ARHGAP9Q9BRR9 750 aa9.78□□□□□ -0.84
TCF4-221ENST00000563888 SNED1Q8TER0 1413 aa9.78□□□□□ -0.84
TCF4-221ENST00000563888 UNC80Q8N2C7 3258 aa9.78□□□□□ -0.84
TCF4-221ENST00000563888 HEG1Q9ULI3 1381 aa9.77□□□□□ -0.84
TCF4-221ENST00000563888 ANKRD26Q9UPS8 1709 aa9.77□□□□□ -0.85
TCF4-221ENST00000563888 EGFRP00533 1210 aa9.77□□□□□ -0.85
TCF4-221ENST00000563888 MCCD1P59942 119 aaPredicted RBP9.77□□□□□ -0.85
TCF4-221ENST00000563888 AGERQ15109 404 aa9.77□□□□□ -0.85
TCF4-221ENST00000563888 ZNF790Q6PG37 636 aa9.77□□□□□ -0.85
TCF4-221ENST00000563888 TFIP11Q9UBB9 837 aaKnown RBP9.77□□□□□ -0.85
TCF4-221ENST00000563888 PALM3A6NDB9 673 aaPredicted RBP9.76□□□□□ -0.85
TCF4-221ENST00000563888 HMOX1P09601 288 aa9.76□□□□□ -0.85
TCF4-221ENST00000563888 TEFQ10587 303 aa9.76□□□□□ -0.85
TCF4-221ENST00000563888 MTHFSDQ2M296 383 aaKnown RBP9.76□□□□□ -0.85
TCF4-221ENST00000563888 CRY2Q49AN0 593 aa9.76□□□□□ -0.85
TCF4-221ENST00000563888 PTCRAQ6ISU1 281 aaPredicted RBP9.76□□□□□ -0.85
TCF4-221ENST00000563888 RBM17Q96I25 401 aaKnown RBP9.76□□□□□ -0.85
TCF4-221ENST00000563888 FMNL2Q96PY5 1086 aa9.76□□□□□ -0.85
TCF4-221ENST00000563888 POLR3GLQ9BT43 218 aa9.76□□□□□ -0.85
TCF4-221ENST00000563888 R3HDMLQ9H3Y0 253 aa9.76□□□□□ -0.85
TCF4-221ENST00000563888 FCF1Q9Y324 198 aaKnown RBP9.76□□□□□ -0.85
TCF4-221ENST00000563888 TRIM17Q9Y577 477 aa9.76□□□□□ -0.85
TCF4-221ENST00000563888 PCDHB9Q9Y5E1 797 aa9.76□□□□□ -0.85
TCF4-221ENST00000563888 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 SCN11AQ9UI33 1791 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 ARFGEF2Q9Y6D5 1785 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 MRC1P22897 1456 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 PRAMEF22A3QJZ6 481 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 ZBTB24O43167 697 aaPredicted RBP9.75□□□□□ -0.85
TCF4-221ENST00000563888 HOXA10P31260 410 aaPredicted RBP9.75□□□□□ -0.85
TCF4-221ENST00000563888 GGCXP38435 758 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 HLFQ16534 295 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 MOB2Q70IA6 237 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 CDCA5Q96FF9 252 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 USP16Q9Y5T5 823 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 CDHR2Q9BYE9 1310 aa9.75□□□□□ -0.85
TCF4-221ENST00000563888 SCN7AQ01118 1682 aa9.74□□□□□ -0.85
TCF4-221ENST00000563888 UBE2Q2LH0YL09 131 aa9.74□□□□□ -0.85
TCF4-221ENST00000563888 KCNQ3O43525 872 aa9.74□□□□□ -0.85
TCF4-221ENST00000563888 IL13P35225 146 aa9.74□□□□□ -0.85
TCF4-221ENST00000563888 DPP8Q6V1X1 898 aaPredicted RBP9.74□□□□□ -0.85
TCF4-221ENST00000563888 SUPT20HQ8NEM7 779 aa9.74□□□□□ -0.85
TCF4-221ENST00000563888 PBXIP1Q96AQ6 731 aa9.74□□□□□ -0.85
TCF4-221ENST00000563888 VPS33BQ9H267 617 aa9.74□□□□□ -0.85
TCF4-221ENST00000563888 ABCC12Q96J65 1359 aa9.74□□□□□ -0.85
TCF4-221ENST00000563888 MAGEB6P1A0A0J9YX57 407 aa9.73□□□□□ -0.85
TCF4-221ENST00000563888 YDJCA8MPS7 323 aa9.73□□□□□ -0.85
TCF4-221ENST00000563888 MYCP01106 439 aaPredicted RBP9.73□□□□□ -0.85
TCF4-221ENST00000563888 PDE4CQ08493 712 aa9.73□□□□□ -0.85
TCF4-221ENST00000563888 SLFNL1Q499Z3 407 aa9.73□□□□□ -0.85
TCF4-221ENST00000563888 NGEFQ8N5V2 710 aa9.73□□□□□ -0.85
TCF4-221ENST00000563888 BAP1Q92560 729 aa9.73□□□□□ -0.85
TCF4-221ENST00000563888 CRAMP1Q96RY5 1269 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms