RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CCDC144BQ3MJ40 725 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 CHGBP05060 677 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 SCRN1Q12765 414 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 CCDC152Q4G0S7 254 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 PHKBQ93100 1093 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 USP28Q96RU2 1077 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNF40-204ENST00000563683 DACH1Q9UI36 760 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 V9GYY5 206 aaPredicted RBP12.01□□□□□ -0.49
RNF40-204ENST00000563683 MBD4O95243 580 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 PI16Q6UXB8 463 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 CTCFLQ8NI51 663 aaPredicted RBP12.01□□□□□ -0.49
RNF40-204ENST00000563683 CDC5LQ99459 802 aaKnown RBP12.01□□□□□ -0.49
RNF40-204ENST00000563683 KCND1Q9NSA2 647 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 ANKARQ7Z5J8 1434 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 ZBTB22O15209 634 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 KCNB2Q92953 911 aa12.01□□□□□ -0.49
RNF40-204ENST00000563683 FTOQ9C0B1 505 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNF40-204ENST00000563683 ADGRL3Q9HAR2 1447 aa12□□□□□ -0.49
RNF40-204ENST00000563683 CLSTN1O94985 981 aa12□□□□□ -0.49
RNF40-204ENST00000563683 FAM160A1Q05DH4 1040 aa12□□□□□ -0.49
RNF40-204ENST00000563683 LLPHQ9BRT6 129 aaKnown RBP12□□□□□ -0.49
RNF40-204ENST00000563683 MKNK2Q9HBH9 465 aa12□□□□□ -0.49
RNF40-204ENST00000563683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.491e-6■□□□□ 10.2
RNF40-204ENST00000563683 JAG2Q9Y219 1238 aa12□□□□□ -0.49
RNF40-204ENST00000563683 A0A087WWV3 80 aa12□□□□□ -0.49
RNF40-204ENST00000563683 FGAP02671 866 aa12□□□□□ -0.49
RNF40-204ENST00000563683 CYP2C19P33261 490 aa12□□□□□ -0.49
RNF40-204ENST00000563683 USP5P45974 858 aa12□□□□□ -0.49
RNF40-204ENST00000563683 DDB1Q16531 1140 aa12□□□□□ -0.49
RNF40-204ENST00000563683 RTN1Q16799 776 aa12□□□□□ -0.49
RNF40-204ENST00000563683 ANKIB1Q9P2G1 1089 aa12□□□□□ -0.49
RNF40-204ENST00000563683 CEP131Q9UPN4 1083 aa12□□□□□ -0.49
RNF40-204ENST00000563683 VGLL3A8MV65 326 aa12□□□□□ -0.49
RNF40-204ENST00000563683 ERVV-2B6SEH9 535 aa12□□□□□ -0.49
RNF40-204ENST00000563683 ZPR1O75312 459 aa12□□□□□ -0.49
RNF40-204ENST00000563683 SNW1Q13573 536 aaKnown RBP12□□□□□ -0.49
RNF40-204ENST00000563683 CATIPQ7Z7H3 387 aa12□□□□□ -0.49
RNF40-204ENST00000563683 DSCC1Q9BVC3 393 aa12□□□□□ -0.49
RNF40-204ENST00000563683 SIGLEC1Q9BZZ2 1709 aa11.99□□□□□ -0.49
RNF40-204ENST00000563683 TULP2O00295 520 aa11.99□□□□□ -0.49
RNF40-204ENST00000563683 URI1O94763 535 aaPredicted RBP11.99□□□□□ -0.49
RNF40-204ENST00000563683 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
RNF40-204ENST00000563683 ARMT1Q9H993 441 aa11.99□□□□□ -0.49
RNF40-204ENST00000563683 NPHP4O75161 1426 aaPredicted RBP11.99□□□□□ -0.49
RNF40-204ENST00000563683 UBASH3AP57075 661 aa11.99□□□□□ -0.49
RNF40-204ENST00000563683 GPS2Q13227 327 aa11.99□□□□□ -0.49
RNF40-204ENST00000563683 UTP14AQ9BVJ6 771 aaKnown RBP11.99□□□□□ -0.49
RNF40-204ENST00000563683 IFNKQ9P0W0 207 aa11.99□□□□□ -0.49
RNF40-204ENST00000563683 CCP110O43303 1012 aa11.99□□□□□ -0.49
RNF40-204ENST00000563683 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
RNF40-204ENST00000563683 AFMP43652 599 aa11.99□□□□□ -0.49
RNF40-204ENST00000563683 ANGEL1Q9UNK9 670 aaKnown RBP11.99□□□□□ -0.49
RNF40-204ENST00000563683 USP27XA6NNY8 438 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 NLRP5P59047 1200 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 SPECC1Q5M775 1068 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 TXLNBQ8N3L3 684 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 NGLY1Q96IV0 654 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 KRT23Q9C075 422 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 IMPACTQ9P2X3 320 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 ZNF532Q9HCE3 1301 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 NRKQ7Z2Y5 1582 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 CEP170BQ9Y4F5 1589 aaPredicted RBP11.98□□□□□ -0.49
RNF40-204ENST00000563683 TSPY2A6NKD2 308 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 TMCO3Q6UWJ1 677 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 ANKRD18AQ8IVF6 992 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 TRIM34Q9BYJ4 488 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 PXDNLA1KZ92 1463 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 IQCB1Q15051 598 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 GPHNQ9NQX3 736 aaPredicted RBP11.98□□□□□ -0.49
RNF40-204ENST00000563683 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
RNF40-204ENST00000563683 AGLP35573 1532 aa11.98□□□□□ -0.49
RNF40-204ENST00000563683 H2AFXP16104 143 aaPredicted RBP11.97□□□□□ -0.49
RNF40-204ENST00000563683 CTDSPL2Q05D32 466 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 UBXN4Q92575 508 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 GREM2Q9H772 168 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 TECPR2O15040 1411 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 PFKFB2O60825 505 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 PRDM1O75626 825 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 PDIA3P30101 505 aaKnown RBP11.97□□□□□ -0.49
RNF40-204ENST00000563683 NAA16Q6N069 864 aaPredicted RBP11.97□□□□□ -0.49
RNF40-204ENST00000563683 CCDC150Q8NCX0 1101 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 ESR2Q92731 530 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 SMARCE1Q969G3 411 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 SH3TC1Q8TE82 1336 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 PDE8AO60658 829 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 CCZ1BP86790 482 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 CCZ1P86791 482 aaPredicted RBP11.97□□□□□ -0.49
RNF40-204ENST00000563683 ST3GAL1Q11201 340 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 BRAPQ7Z569 592 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 OSBP2Q969R2 916 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 L2HGDHQ9H9P8 463 aa11.97□□□□□ -0.49
RNF40-204ENST00000563683 NAP1L1P55209 391 aaKnown RBP11.96□□□□□ -0.49
RNF40-204ENST00000563683 CCDC24Q8N4L8 307 aa11.96□□□□□ -0.49
RNF40-204ENST00000563683 ALDH8A1Q9H2A2 487 aaPredicted RBP11.96□□□□□ -0.49
RNF40-204ENST00000563683 CNNM2Q9H8M5 875 aa11.96□□□□□ -0.49
RNF40-204ENST00000563683 MAST3O60307 1309 aa11.96□□□□□ -0.49
RNF40-204ENST00000563683 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms