RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RFC4P35249 363 aa22.55■■□□□ 1.2
SMPD3-203ENST00000563226 TPTE2Q6XPS3 522 aa22.55■■□□□ 1.2
SMPD3-203ENST00000563226 ZNF274Q96GC6 653 aaPredicted RBP22.55■■□□□ 1.2
SMPD3-203ENST00000563226 LLPHQ9BRT6 129 aaKnown RBP22.55■■□□□ 1.2
SMPD3-203ENST00000563226 BCL11BQ9C0K0 894 aaPredicted RBP22.55■■□□□ 1.2
SMPD3-203ENST00000563226 BRWD3Q6RI45 1802 aa22.55■■□□□ 1.2
SMPD3-203ENST00000563226 PTPDC1A2A3K4 754 aa22.54■■□□□ 1.2
SMPD3-203ENST00000563226 KLRK1P26718 216 aa22.54■■□□□ 1.2
SMPD3-203ENST00000563226 TRAPPC3LQ5T215 181 aa22.54■■□□□ 1.2
SMPD3-203ENST00000563226 RALYLQ86SE5 291 aaKnown RBP22.54■■□□□ 1.2
SMPD3-203ENST00000563226 UBR3Q6ZT12 1888 aa22.54■■□□□ 1.2
SMPD3-203ENST00000563226 PDIA4P13667 645 aaKnown RBP22.54■■□□□ 1.2
SMPD3-203ENST00000563226 EVCP57679 992 aa22.54■■□□□ 1.2
SMPD3-203ENST00000563226 RPS8P62241 208 aaKnown RBP22.54■■□□□ 1.2
SMPD3-203ENST00000563226 LCORLQ8N3X6 602 aa22.54■■□□□ 1.2
SMPD3-203ENST00000563226 QTRT2Q9H974 415 aaKnown RBP22.54■■□□□ 1.2
SMPD3-203ENST00000563226 PRKAB2O43741 272 aa22.53■■□□□ 1.2
SMPD3-203ENST00000563226 LRP2BPQ9P2M1 347 aa22.53■■□□□ 1.2
SMPD3-203ENST00000563226 SALL1Q9NSC2 1324 aa22.53■■□□□ 1.2
SMPD3-203ENST00000563226 PATL2C9JE40 543 aaKnown RBP22.53■■□□□ 1.2
SMPD3-203ENST00000563226 TM4SF1P30408 202 aa22.53■■□□□ 1.2
SMPD3-203ENST00000563226 UBE2HP62256 183 aa22.53■■□□□ 1.2
SMPD3-203ENST00000563226 IFNL3Q8IZI9 196 aa22.53■■□□□ 1.2
SMPD3-203ENST00000563226 FAM84BQ96KN1 310 aaPredicted RBP22.53■■□□□ 1.2
SMPD3-203ENST00000563226 FOSBP53539 338 aa22.52■■□□□ 1.2
SMPD3-203ENST00000563226 NFIXQ14938 502 aa22.52■■□□□ 1.2
SMPD3-203ENST00000563226 ALX1Q15699 326 aa22.52■■□□□ 1.2
SMPD3-203ENST00000563226 CYB5R4Q7L1T6 521 aa22.52■■□□□ 1.2
SMPD3-203ENST00000563226 ADGRA1Q86SQ6 560 aa22.52■■□□□ 1.2
SMPD3-203ENST00000563226 SLC51AQ86UW1 340 aa22.52■■□□□ 1.2
SMPD3-203ENST00000563226 MIGA1Q8NAN2 632 aa22.52■■□□□ 1.2
SMPD3-203ENST00000563226 FAM184AQ8NB25 1140 aa22.52■■□□□ 1.2
SMPD3-203ENST00000563226 CACNA1SQ13698 1873 aa22.52■■□□□ 1.2
SMPD3-203ENST00000563226 NEDD4P46934 1319 aa22.52■■□□□ 1.19
SMPD3-203ENST00000563226 LRSAM1Q6UWE0 723 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 RAB11FIP4Q86YS3 637 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 RBSNQ9H1K0 784 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 INCENPQ9NQS7 918 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 ABCF2Q9UG63 623 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 MYH13Q9UKX3 1938 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 KLF18A0A0U1RQI7 1052 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 GSG1L2A8MUP6 293 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 RESTQ13127 1097 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 TTC6Q86TZ1 520 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 HPS5Q9UPZ3 1129 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 TACC3Q9Y6A5 838 aa22.51■■□□□ 1.19
SMPD3-203ENST00000563226 ZMYM6O95789 1325 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 GNL3LQ9NVN8 582 aaKnown RBP22.5■■□□□ 1.19
SMPD3-203ENST00000563226 WDR19Q8NEZ3 1342 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 MYH15Q9Y2K3 1946 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.5■■□□□ 1.19
SMPD3-203ENST00000563226 B4E1Z4 1266 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 H3BQV1 296 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 KRT85P78386 507 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 CTDSPL2Q05D32 466 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 CAVIN4Q5BKX8 364 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 IFFO2Q5TF58 517 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 NAPBQ9H115 298 aa22.5■■□□□ 1.19
SMPD3-203ENST00000563226 TIAM2Q8IVF5 1701 aa22.49■■□□□ 1.19
SMPD3-203ENST00000563226 CARMIL3Q8ND23 1372 aa22.49■■□□□ 1.19
SMPD3-203ENST00000563226 PNPLA7Q6ZV29 1317 aa22.49■■□□□ 1.19
SMPD3-203ENST00000563226 GOLGA8BA8MQT2 603 aa22.49■■□□□ 1.19
SMPD3-203ENST00000563226 HMGN5P82970 282 aaKnown RBP22.49■■□□□ 1.19
SMPD3-203ENST00000563226 TRDNQ13061 729 aa22.49■■□□□ 1.19
SMPD3-203ENST00000563226 VPS37DQ86XT2 251 aa22.49■■□□□ 1.19
SMPD3-203ENST00000563226 NPHP1O15259 732 aa22.48■■□□□ 1.19
SMPD3-203ENST00000563226 CYP7A1P22680 504 aa22.48■■□□□ 1.19
SMPD3-203ENST00000563226 NASPP49321 788 aaPredicted RBP22.48■■□□□ 1.19
SMPD3-203ENST00000563226 TFCP2L1Q9NZI6 479 aa22.48■■□□□ 1.19
SMPD3-203ENST00000563226 RAI14Q9P0K7 980 aa22.48■■□□□ 1.19
SMPD3-203ENST00000563226 TFIP11Q9UBB9 837 aaKnown RBP22.48■■□□□ 1.19
SMPD3-203ENST00000563226 SLC4A4Q9Y6R1 1079 aa22.48■■□□□ 1.19
SMPD3-203ENST00000563226 FDPSP14324 419 aaKnown RBP22.48■■□□□ 1.19
SMPD3-203ENST00000563226 CSPP1Q1MSJ5 1256 aa22.48■■□□□ 1.19
SMPD3-203ENST00000563226 FBXO33Q7Z6M2 555 aa22.48■■□□□ 1.19
SMPD3-203ENST00000563226 SYAP1Q96A49 352 aaPredicted RBP22.48■■□□□ 1.19
SMPD3-203ENST00000563226 SENP2Q9HC62 589 aa22.47■■□□□ 1.19
SMPD3-203ENST00000563226 ZNF384Q8TF68 577 aa22.46■■□□□ 1.19
SMPD3-203ENST00000563226 SH2B2O14492 632 aaPredicted RBP22.46■■□□□ 1.19
SMPD3-203ENST00000563226 TRIM37O94972 964 aa22.45■■□□□ 1.18
SMPD3-203ENST00000563226 TDO2P48775 406 aa22.45■■□□□ 1.18
SMPD3-203ENST00000563226 TXNRD3Q86VQ6 643 aa22.45■■□□□ 1.18
SMPD3-203ENST00000563226 CNBD1Q8NA66 436 aa22.45■■□□□ 1.18
SMPD3-203ENST00000563226 ANKRD2Q9GZV1 360 aa22.45■■□□□ 1.18
SMPD3-203ENST00000563226 ANGEL1Q9UNK9 670 aaKnown RBP22.45■■□□□ 1.18
SMPD3-203ENST00000563226 GNAT2P19087 354 aa22.45■■□□□ 1.18
SMPD3-203ENST00000563226 GUCY1B3Q02153 619 aa22.45■■□□□ 1.18
SMPD3-203ENST00000563226 CCDC183Q5T5S1 534 aa22.45■■□□□ 1.18
SMPD3-203ENST00000563226 NAA16Q6N069 864 aaPredicted RBP22.45■■□□□ 1.18
SMPD3-203ENST00000563226 KRT27Q7Z3Y8 459 aa22.45■■□□□ 1.18
SMPD3-203ENST00000563226 RTN4Q9NQC3 1192 aaKnown RBP22.45■■□□□ 1.18
SMPD3-203ENST00000563226 ADRA2BP18089 450 aa22.44■■□□□ 1.18
SMPD3-203ENST00000563226 SDR42E1Q8WUS8 393 aa22.44■■□□□ 1.18
SMPD3-203ENST00000563226 ELP1O95163 1332 aa22.44■■□□□ 1.18
SMPD3-203ENST00000563226 GYS1P13807 737 aa22.43■■□□□ 1.18
SMPD3-203ENST00000563226 PRR5LQ6MZQ0 368 aa22.43■■□□□ 1.18
SMPD3-203ENST00000563226 BAZ2AQ9UIF9 1905 aaKnown RBP22.43■■□□□ 1.18
SMPD3-203ENST00000563226 MAGEB6P1A0A0J9YX57 407 aa22.43■■□□□ 1.18
SMPD3-203ENST00000563226 IGDCC4Q8TDY8 1250 aa22.43■■□□□ 1.18
SMPD3-203ENST00000563226 LEO1Q8WVC0 666 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms