RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 SNX21Q969T3 373 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 IER2Q9BTL4 223 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 EFCAB5A4FU69 1503 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 EVC2Q86UK5 1308 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 CASKIN1Q8WXD9 1431 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 FGD5Q6ZNL6 1462 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 GOLGA6L10A6NI86 522 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 LDHCP07864 332 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 PSME1Q06323 249 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 LRP8Q14114 963 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 SLC4A8Q2Y0W8 1093 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 CCDC150Q8NCX0 1101 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDH1-205ENST00000562836 MAK16Q9BXY0 300 aaKnown RBP10.69□□□□□ -0.7
CDH1-205ENST00000562836 DNAJC5BQ9UF47 199 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 TBK1Q9UHD2 729 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 HSPA1AP0DMV8 641 aaKnown RBP10.68□□□□□ -0.7
CDH1-205ENST00000562836 HSPA1BP0DMV9 641 aaKnown RBP10.68□□□□□ -0.7
CDH1-205ENST00000562836 EIF2S2P20042 333 aaKnown RBP10.68□□□□□ -0.7
CDH1-205ENST00000562836 CSE1LP55060 971 aaKnown RBP10.68□□□□□ -0.7
CDH1-205ENST00000562836 GORASP1Q9BQQ3 440 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 ABCF3Q9NUQ8 709 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 CNPY2Q9Y2B0 182 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 FGD6Q6ZV73 1430 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 RPS6KA5O75582 802 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 GFPT2O94808 682 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 INPP5BP32019 993 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 POLR2FP61218 127 aaKnown RBP10.68□□□□□ -0.7
CDH1-205ENST00000562836 SMC1AQ14683 1233 aaKnown RBP10.68□□□□□ -0.7
CDH1-205ENST00000562836 SKIDA1Q1XH10 827 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 CAPRIN2Q6IMN6 1127 aaKnown RBP10.68□□□□□ -0.7
CDH1-205ENST00000562836 RCSD1Q6JBY9 416 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 KIAA1958Q8N8K9 716 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 GSDMAQ96QA5 445 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 PRKRIP1Q9H875 184 aaPredicted RBP10.68□□□□□ -0.7
CDH1-205ENST00000562836 DNAI1Q9UI46 699 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 KIAA1107Q9UPP5 1409 aa10.68□□□□□ -0.7
CDH1-205ENST00000562836 SETD1BQ9UPS6 1966 aaKnown RBP10.68□□□□□ -0.7
CDH1-205ENST00000562836 MTRF1O75570 445 aaKnown RBP10.67□□□□□ -0.7
CDH1-205ENST00000562836 CFAP58Q5T655 872 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 LILRB2Q8N423 598 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 ALS2CR12Q96Q35 445 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 UBXN6Q9BZV1 441 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 KCNF1Q9H3M0 494 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 CROTQ9UKG9 612 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 MAFFQ9ULX9 164 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 KDM5BQ9UGL1 1544 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 SEPT2Q15019 361 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 EMC10Q5UCC4 262 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 ANKRD13DQ6ZTN6 518 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 SLC15A3Q8IY34 581 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 ERO1AQ96HE7 468 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 RPS6KC1Q96S38 1066 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
CDH1-205ENST00000562836 ZNHIT6Q9NWK9 470 aaKnown RBP10.67□□□□□ -0.7
CDH1-205ENST00000562836 AATFQ9NY61 560 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDH1-205ENST00000562836 ADCY5O95622 1261 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 ENDOUP21128 410 aaKnown RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 ROR2Q01974 943 aaKnown RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 RASSF7Q02833 373 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 ACTN3Q08043 901 aaPredicted RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 PALB2Q86YC2 1186 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDH1-205ENST00000562836 ATRIPQ8WXE1 791 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 FAM107BQ9H098 131 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 SYNCQ9H7C4 482 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 PAPOLBQ9NRJ5 636 aaKnown RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 SBNO2Q9Y2G9 1366 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 PTPN23Q9H3S7 1636 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 PLEKHG3A1L390 1219 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 PABPN1LA6NDY0 278 aaKnown RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 CHGAP10645 457 aaKnown RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 GBP2P32456 591 aaPredicted RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 GCLCP48506 637 aaPredicted RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 SLC8A3P57103 927 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 RC3H1Q5TC82 1133 aaKnown RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 THOC7Q6I9Y2 204 aaKnown RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 TMCO3Q6UWJ1 677 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 MCM10Q7L590 875 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 CEP57Q86XR8 500 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 NDUFAF2Q8N183 169 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 LILRB1Q8NHL6 650 aaPredicted RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 ZNF512BQ96KM6 892 aaPredicted RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 ATP6V0A2Q9Y487 856 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 BZW2Q9Y6E2 419 aaKnown RBP10.66□□□□□ -0.7
CDH1-205ENST00000562836 NCOA2Q15596 1464 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 SCAPERQ9BY12 1400 aa10.66□□□□□ -0.7
CDH1-205ENST00000562836 P4HA2O15460 535 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 MAP3K9P80192 1104 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 MCTP1Q6DN14 999 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
CDH1-205ENST00000562836 BARGINQ6ZT62 677 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 RELL1Q8IUW5 271 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 TMEM151BQ8IW70 566 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 ZNF713Q8N859 430 aaPredicted RBP10.65□□□□□ -0.7
CDH1-205ENST00000562836 GSDMBQ8TAX9 411 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 SREK1Q8WXA9 508 aaKnown RBP10.65□□□□□ -0.7
CDH1-205ENST00000562836 JAKMIP2Q96AA8 810 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 ARGLU1Q9NWB6 273 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms