RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 NEK4P51957 841 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 MECOMQ03112 1051 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 SUPT20HQ8NEM7 779 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 TBC1D22AQ8WUA7 517 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 PIM2Q9P1W9 311 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 CTNNA3Q9UI47 895 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 JAG2Q9Y219 1238 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 MAST2Q6P0Q8 1798 aa16.78■□□□□ 0.28
SPG7-206ENST00000562775 LDHBP07195 334 aaKnown RBP16.77■□□□□ 0.28
SPG7-206ENST00000562775 CCDC93Q567U6 631 aa16.77■□□□□ 0.28
SPG7-206ENST00000562775 ZNF384Q8TF68 577 aa16.77■□□□□ 0.28
SPG7-206ENST00000562775 CCDC88AQ3V6T2 1871 aa16.77■□□□□ 0.28
SPG7-206ENST00000562775 G3V3G9 751 aa16.77■□□□□ 0.27
SPG7-206ENST00000562775 CD2BP2O95400 341 aaKnown RBP16.77■□□□□ 0.27
SPG7-206ENST00000562775 CYP21A2P08686 494 aa16.77■□□□□ 0.27
SPG7-206ENST00000562775 GNAT2P19087 354 aa16.77■□□□□ 0.27
SPG7-206ENST00000562775 KRT32Q14532 448 aa16.77■□□□□ 0.27
SPG7-206ENST00000562775 DCAF8Q5TAQ9 597 aa16.77■□□□□ 0.27
SPG7-206ENST00000562775 ADGRA1Q86SQ6 560 aa16.77■□□□□ 0.27
SPG7-206ENST00000562775 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.27
SPG7-206ENST00000562775 ARMT1Q9H993 441 aa16.77■□□□□ 0.27
SPG7-206ENST00000562775 MAGEB6P1A0A0J9YX57 407 aa16.76■□□□□ 0.27
SPG7-206ENST00000562775 PATL2C9JE40 543 aaKnown RBP16.76■□□□□ 0.27
SPG7-206ENST00000562775 FGAP02671 866 aa16.76■□□□□ 0.27
SPG7-206ENST00000562775 PSMA5P28066 241 aa16.76■□□□□ 0.27
SPG7-206ENST00000562775 DOK7Q18PE1 504 aa16.76■□□□□ 0.27
SPG7-206ENST00000562775 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
SPG7-206ENST00000562775 SOGA3Q5TF21 947 aa16.76■□□□□ 0.27
SPG7-206ENST00000562775 PODNQ7Z5L7 613 aa16.76■□□□□ 0.27
SPG7-206ENST00000562775 DZIP1Q86YF9 867 aaKnown RBP16.76■□□□□ 0.27
SPG7-206ENST00000562775 MIGA1Q8NAN2 632 aa16.76■□□□□ 0.27
SPG7-206ENST00000562775 JAKMIP1Q96N16 626 aaKnown RBP16.76■□□□□ 0.27
SPG7-206ENST00000562775 UPF3BQ9BZI7 483 aaKnown RBP16.76■□□□□ 0.27
SPG7-206ENST00000562775 ZSWIM6Q9HCJ5 1215 aa16.76■□□□□ 0.27
SPG7-206ENST00000562775 RPAP1Q9BWH6 1393 aaPredicted RBP16.75■□□□□ 0.27
SPG7-206ENST00000562775 K7ELQ4 463 aaPredicted RBP16.75■□□□□ 0.27
SPG7-206ENST00000562775 GTF2IP78347 998 aa16.75■□□□□ 0.27
SPG7-206ENST00000562775 ALX1Q15699 326 aa16.75■□□□□ 0.27
SPG7-206ENST00000562775 LCORLQ8N3X6 602 aa16.75■□□□□ 0.27
SPG7-206ENST00000562775 RIOK1Q9BRS2 568 aaKnown RBP16.75■□□□□ 0.27
SPG7-206ENST00000562775 CHD4Q14839 1912 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 APPP05067 770 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
SPG7-206ENST00000562775 MCM2P49736 904 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 GSTO1P78417 241 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 KIAA2012Q0VF49 1180 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
SPG7-206ENST00000562775 MFSD14BQ5SR56 506 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 TTLL5Q6EMB2 1281 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 PSMD1Q99460 953 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 PPP1R1BQ9UD71 204 aaPredicted RBP16.74■□□□□ 0.27
SPG7-206ENST00000562775 TAF6LQ9Y6J9 622 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 ZMYM6O95789 1325 aa16.74■□□□□ 0.27
SPG7-206ENST00000562775 LDHCP07864 332 aa16.73■□□□□ 0.27
SPG7-206ENST00000562775 DALRD3Q5D0E6 543 aaKnown RBP16.73■□□□□ 0.27
SPG7-206ENST00000562775 SUGT1Q9Y2Z0 365 aa16.73■□□□□ 0.27
SPG7-206ENST00000562775 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
SPG7-206ENST00000562775 SLC4A4Q9Y6R1 1079 aa16.73■□□□□ 0.27
SPG7-206ENST00000562775 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 GRIK5Q16478 980 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 RUFY3Q7L099 469 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 IFNL3Q8IZI9 196 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 TTC14Q96N46 770 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 NACAP1Q9BZK3 213 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 DBNDD1Q9H9R9 158 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 BRCA1P38398 1863 aaKnown RBP16.72■□□□□ 0.27
SPG7-206ENST00000562775 DYNLL1P63167 89 aaKnown RBP16.72■□□□□ 0.27
SPG7-206ENST00000562775 AOC3Q16853 763 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 BLOC1S2Q6QNY1 142 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 ILDR2Q71H61 639 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 KLHL34Q8N239 644 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 VPS33BQ9H267 617 aa16.72■□□□□ 0.27
SPG7-206ENST00000562775 ZNF213O14771 459 aa16.71■□□□□ 0.27
SPG7-206ENST00000562775 PPIP5K2O43314 1243 aa16.71■□□□□ 0.27
SPG7-206ENST00000562775 PRKAB2O43741 272 aa16.71■□□□□ 0.27
SPG7-206ENST00000562775 ECE2O60344 883 aa16.71■□□□□ 0.27
SPG7-206ENST00000562775 SLF2Q8IX21 1173 aa16.71■□□□□ 0.27
SPG7-206ENST00000562775 NAPBQ9H115 298 aa16.71■□□□□ 0.27
SPG7-206ENST00000562775 EPB41L4AQ9HCS5 686 aaPredicted RBP16.71■□□□□ 0.27
SPG7-206ENST00000562775 E7EWF7 191 aa16.7■□□□□ 0.26
SPG7-206ENST00000562775 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
SPG7-206ENST00000562775 CPA1P15085 419 aa16.7■□□□□ 0.26
SPG7-206ENST00000562775 PPP4CP60510 307 aa16.7■□□□□ 0.26
SPG7-206ENST00000562775 FKBP1AP62942 108 aaKnown RBP16.7■□□□□ 0.26
SPG7-206ENST00000562775 STOX1Q6ZVD7 989 aa16.7■□□□□ 0.26
SPG7-206ENST00000562775 FBXW7Q969H0 707 aa16.7■□□□□ 0.26
SPG7-206ENST00000562775 FAM163AQ96GL9 167 aaPredicted RBP16.7■□□□□ 0.26
SPG7-206ENST00000562775 PDRG1Q9NUG6 133 aa16.7■□□□□ 0.26
SPG7-206ENST00000562775 AATFQ9NY61 560 aaKnown RBP eCLIP16.7■□□□□ 0.26
SPG7-206ENST00000562775 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
SPG7-206ENST00000562775 BAG3O95817 575 aa16.69■□□□□ 0.26
SPG7-206ENST00000562775 RPS6KB1P23443 525 aa16.69■□□□□ 0.26
SPG7-206ENST00000562775 HAND2P61296 217 aa16.69■□□□□ 0.26
SPG7-206ENST00000562775 DIXDC1Q155Q3 683 aa16.69■□□□□ 0.26
SPG7-206ENST00000562775 STRIP1Q5VSL9 837 aa16.69■□□□□ 0.26
SPG7-206ENST00000562775 GIMAP6Q6P9H5 292 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms