RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 ZBTB7BO15156 539 aaPredicted RBP9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 KCNC4Q03721 635 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 TCIRG1Q13488 830 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 UBE2Q1Q7Z7E8 422 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 DEFB123Q8N688 67 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 NECTIN2Q92692 538 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 ZC3H12CQ9C0D7 883 aaKnown RBP9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 SEC31BQ9NQW1 1179 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 MANSC4A6NHS7 340 aaPredicted RBP9.11□□□□□ -0.95
CNEP1R1-204ENST00000562576 UFL1O94874 794 aa9.11□□□□□ -0.95
CNEP1R1-204ENST00000562576 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
CNEP1R1-204ENST00000562576 CTGFP29279 349 aa9.11□□□□□ -0.95
CNEP1R1-204ENST00000562576 AIMP1Q12904 312 aaKnown RBP9.11□□□□□ -0.95
CNEP1R1-204ENST00000562576 AGBL3Q8NEM8 1001 aa9.11□□□□□ -0.95
CNEP1R1-204ENST00000562576 FAM89AQ96GI7 184 aa9.11□□□□□ -0.95
CNEP1R1-204ENST00000562576 SSC5DA1L4H1 1573 aa9.11□□□□□ -0.95
CNEP1R1-204ENST00000562576 LAMB4A4D0S4 1761 aa9.1□□□□□ -0.95
CNEP1R1-204ENST00000562576 PER1O15534 1290 aaPredicted RBP9.1□□□□□ -0.95
CNEP1R1-204ENST00000562576 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
CNEP1R1-204ENST00000562576 COPS6Q7L5N1 327 aa9.1□□□□□ -0.95
CNEP1R1-204ENST00000562576 ARMC9Q7Z3E5 817 aa9.1□□□□□ -0.95
CNEP1R1-204ENST00000562576 RTF1Q92541 710 aaKnown RBP9.1□□□□□ -0.95
CNEP1R1-204ENST00000562576 JARID2Q92833 1246 aaPredicted RBP9.1□□□□□ -0.95
CNEP1R1-204ENST00000562576 SH3TC1Q8TE82 1336 aa9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 EYSQ5T1H1 3165 aa9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 ATP5J2-PTCD1G3V325 749 aa9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 PACS2Q86VP3 889 aa9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 CCDC85AQ96PX6 553 aaPredicted RBP9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 EYA3Q99504 573 aa9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 MTMR10Q9NXD2 777 aa9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 TSR3Q9UJK0 312 aaKnown RBP9.09□□□□□ -0.95
CNEP1R1-204ENST00000562576 DDX60Q8IY21 1712 aaKnown RBP9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 USP17L3A6NCW0 530 aa9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 USP17L4A6NCW7 530 aa9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 SPDYE16A6NNV3 312 aaPredicted RBP9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 RPS8P62241 208 aaKnown RBP9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 SF3B3Q15393 1217 aaKnown RBP9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 DACT2Q5SW24 774 aa9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 USP17L1Q7RTZ2 530 aa9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 BRI3BPQ8WY22 251 aa9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 PRDM6Q9NQX0 595 aa9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 SEPT9Q9UHD8 586 aaPredicted RBP9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 STXBP5LQ9Y2K9 1186 aa9.08□□□□□ -0.96
CNEP1R1-204ENST00000562576 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 USP2O75604 605 aaPredicted RBP9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 NF2P35240 595 aa9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 INHBEP58166 350 aa9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 NBPF12Q5TAG4 269 aaPredicted RBP9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 TMC4Q7Z404 712 aa9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 NBPF11Q86T75 865 aa9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 TXNRD3Q86VQ6 643 aa9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 FAM43AQ8N2R8 423 aa9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 DEFB129Q9H1M3 183 aa9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 ELP3Q9H9T3 547 aa9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 ANKIB1Q9P2G1 1089 aa9.07□□□□□ -0.96
CNEP1R1-204ENST00000562576 ERBB4Q15303 1308 aa9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 PRUNE2Q8WUY3 3088 aa9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 LAMA2P24043 3122 aaKnown RBP9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 U2AF1L5P0DN76 240 aaPredicted RBP9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 ZBTB48P10074 688 aaPredicted RBP9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 U2AF1Q01081 240 aaKnown RBP eCLIP9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 KRT24Q2M2I5 525 aa9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 BBXQ8WY36 941 aaPredicted RBP9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 DDX12PQ92771 950 aa9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 ZBED3Q96IU2 234 aaPredicted RBP9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 GGA1Q9UJY5 639 aa9.06□□□□□ -0.96
CNEP1R1-204ENST00000562576 ZNF646O15015 1829 aaPredicted RBP9.05□□□□□ -0.96
CNEP1R1-204ENST00000562576 CCL5P13501 91 aa9.05□□□□□ -0.96
CNEP1R1-204ENST00000562576 KLRK1P26718 216 aa9.05□□□□□ -0.96
CNEP1R1-204ENST00000562576 MAP3K11Q16584 847 aa9.05□□□□□ -0.96
CNEP1R1-204ENST00000562576 KIAA0825Q8IV33 1275 aa9.05□□□□□ -0.96
CNEP1R1-204ENST00000562576 OPTNQ96CV9 577 aa9.05□□□□□ -0.96
CNEP1R1-204ENST00000562576 ZMYND8Q9ULU4 1186 aaPredicted RBP9.05□□□□□ -0.96
CNEP1R1-204ENST00000562576 PSME4Q14997 1843 aa9.04□□□□□ -0.96
CNEP1R1-204ENST00000562576 CLRN2A0PK11 232 aa9.04□□□□□ -0.96
CNEP1R1-204ENST00000562576 GJA8P48165 433 aa9.04□□□□□ -0.96
CNEP1R1-204ENST00000562576 TAF1CQ15572 869 aaPredicted RBP9.04□□□□□ -0.96
CNEP1R1-204ENST00000562576 FAM161BQ96MY7 647 aa9.04□□□□□ -0.96
CNEP1R1-204ENST00000562576 GUCD1Q96NT3 240 aa9.04□□□□□ -0.96
CNEP1R1-204ENST00000562576 ISCA1Q9BUE6 129 aa9.04□□□□□ -0.96
CNEP1R1-204ENST00000562576 IRS4O14654 1257 aaPredicted RBP9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 MAP3K7O43318 606 aa9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 SYN1P17600 705 aa9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 NBR1Q14596 966 aa9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 LAPTM4AQ15012 233 aa9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 DIS3LQ8TF46 1054 aaKnown RBP9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 TRIM47Q96LD4 638 aa9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 GDF15Q99988 308 aa9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 UNC93B1Q9H1C4 597 aa9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 NR2E3Q9Y5X4 410 aa9.03□□□□□ -0.96
CNEP1R1-204ENST00000562576 CCL15-CCL14A0A0B4J2E2 113 aa9.02□□□□□ -0.97
CNEP1R1-204ENST00000562576 HTATSF1O43719 755 aaKnown RBP9.02□□□□□ -0.97
CNEP1R1-204ENST00000562576 FARP2O94887 1054 aaPredicted RBP9.02□□□□□ -0.97
CNEP1R1-204ENST00000562576 PPP4CP60510 307 aa9.02□□□□□ -0.97
CNEP1R1-204ENST00000562576 EIF4G2P78344 907 aaKnown RBP eCLIP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms