RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
CDH13-205ENST00000562307 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 SLC16A10Q8TF71 515 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 AGXT2Q9BYV1 514 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 RAI14Q9P0K7 980 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 POLLQ9UGP5 575 aa11.33□□□□□ -0.6
CDH13-205ENST00000562307 MYO5AQ9Y4I1 1855 aaKnown RBP11.32□□□□□ -0.6
CDH13-205ENST00000562307 A0A0G2JLW4 131 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 GSG1L2A8MUP6 293 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 ZNF213O14771 459 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 FRAT2O75474 233 aaPredicted RBP11.32□□□□□ -0.6
CDH13-205ENST00000562307 CLEC17AQ6ZS10 378 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 ZNF384Q8TF68 577 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 NSUN4Q96CB9 384 aaKnown RBP11.32□□□□□ -0.6
CDH13-205ENST00000562307 RIOK1Q9BRS2 568 aaKnown RBP11.32□□□□□ -0.6
CDH13-205ENST00000562307 ARMT1Q9H993 441 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 CD209Q9NNX6 404 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 ABCF2Q9UG63 623 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
CDH13-205ENST00000562307 H0YIN7 160 aa11.31□□□□□ -0.6
CDH13-205ENST00000562307 MECOMQ03112 1051 aa11.31□□□□□ -0.6
CDH13-205ENST00000562307 NAA16Q6N069 864 aaPredicted RBP11.31□□□□□ -0.6
CDH13-205ENST00000562307 ADGRA1Q86SQ6 560 aa11.31□□□□□ -0.6
CDH13-205ENST00000562307 C2CD5Q86YS7 1000 aa11.31□□□□□ -0.6
CDH13-205ENST00000562307 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
CDH13-205ENST00000562307 EPB41L4AQ9HCS5 686 aaPredicted RBP11.31□□□□□ -0.6
CDH13-205ENST00000562307 TPCN1Q9ULQ1 816 aa11.31□□□□□ -0.6
CDH13-205ENST00000562307 WDR19Q8NEZ3 1342 aa11.31□□□□□ -0.6
CDH13-205ENST00000562307 CACNA1SQ13698 1873 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 MAGEB6P1A0A0J9YX57 407 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 LARGE1O95461 756 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 EVCP57679 992 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 CHAF1AQ13111 956 aaPredicted RBP11.3□□□□□ -0.6
CDH13-205ENST00000562307 ME3Q16798 604 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 GIMAP6Q6P9H5 292 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 Q6ZUG5 572 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
CDH13-205ENST00000562307 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
CDH13-205ENST00000562307 MPNDQ8N594 471 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.3□□□□□ -0.6
CDH13-205ENST00000562307 SLC4A4Q9Y6R1 1079 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 FAM205AQ6ZU69 1335 aa11.3□□□□□ -0.6
CDH13-205ENST00000562307 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 PRKAB2O43741 272 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 APPP05067 770 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 NCOA7Q8NI08 942 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 TNPO1Q92973 898 aaKnown RBP11.29□□□□□ -0.6
CDH13-205ENST00000562307 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 GPR101Q96P66 508 aaPredicted RBP11.29□□□□□ -0.6
CDH13-205ENST00000562307 LARP6Q9BRS8 491 aaKnown RBP11.29□□□□□ -0.6
CDH13-205ENST00000562307 NACAP1Q9BZK3 213 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 NAPBQ9H115 298 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 ZDHHC9Q9Y397 364 aa11.29□□□□□ -0.6
CDH13-205ENST00000562307 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
CDH13-205ENST00000562307 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 LDHBP07195 334 aaKnown RBP11.28□□□□□ -0.6
CDH13-205ENST00000562307 PRDX5P30044 214 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 MCM4P33991 863 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 MCM5P33992 734 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 PPP4CP60510 307 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 HAND2P61296 217 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 GSTO1P78417 241 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 NBR1Q14596 966 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 MIGA1Q8NAN2 632 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 C7orf43Q8WVR3 580 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 TCEANC2Q96MN5 208 aa11.28□□□□□ -0.6
CDH13-205ENST00000562307 RTFDC1Q9BY42 306 aaPredicted RBP11.28□□□□□ -0.6
CDH13-205ENST00000562307 TMX4Q9H1E5 349 aaPredicted RBP11.28□□□□□ -0.6
CDH13-205ENST00000562307 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
CDH13-205ENST00000562307 BRD1O95696 1058 aa11.27□□□□□ -0.61
CDH13-205ENST00000562307 LDHCP07864 332 aa11.27□□□□□ -0.61
CDH13-205ENST00000562307 PDIA4P13667 645 aaKnown RBP11.27□□□□□ -0.61
CDH13-205ENST00000562307 DYNLL1P63167 89 aaKnown RBP11.27□□□□□ -0.61
CDH13-205ENST00000562307 CC2D2BQ6DHV5 1058 aa11.27□□□□□ -0.61
CDH13-205ENST00000562307 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.61
CDH13-205ENST00000562307 TBC1D10CQ8IV04 446 aa11.27□□□□□ -0.61
CDH13-205ENST00000562307 BRF1Q92994 677 aa11.27□□□□□ -0.61
CDH13-205ENST00000562307 ZNF622Q969S3 477 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDH13-205ENST00000562307 ZNF274Q96GC6 653 aaPredicted RBP11.27□□□□□ -0.61
CDH13-205ENST00000562307 FAM163AQ96GL9 167 aaPredicted RBP11.27□□□□□ -0.61
CDH13-205ENST00000562307 EYA3Q99504 573 aa11.27□□□□□ -0.61
CDH13-205ENST00000562307 ZC3H12CQ9C0D7 883 aaKnown RBP11.27□□□□□ -0.61
CDH13-205ENST00000562307 PDGFDQ9GZP0 370 aaPredicted RBP11.27□□□□□ -0.61
CDH13-205ENST00000562307 PRC1O43663 620 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 PFKFB2O60825 505 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 ANTXR2P58335 489 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 TRDNQ13061 729 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 PKP1Q13835 747 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 GRIK5Q16478 980 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 AKNAD1Q5T1N1 836 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 OLFM4Q6UX06 510 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 RALYLQ86SE5 291 aaKnown RBP11.26□□□□□ -0.61
CDH13-205ENST00000562307 DZIP1Q86YF9 867 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms