RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 SPATA31C1P0DKV0 1188 aa9.28□□□□□ -0.92
DENND4A-204ENST00000562028 RLBP1P12271 317 aa9.28□□□□□ -0.92
DENND4A-204ENST00000562028 AP3B2Q13367 1082 aa9.28□□□□□ -0.92
DENND4A-204ENST00000562028 SAMM50Q9Y512 469 aa9.28□□□□□ -0.92
DENND4A-204ENST00000562028 FAM229AH3BQW9 127 aa9.27□□□□□ -0.93
DENND4A-204ENST00000562028 RNF225M0QZC1 329 aaPredicted RBP9.27□□□□□ -0.93
DENND4A-204ENST00000562028 CYP11A1P05108 521 aa9.27□□□□□ -0.93
DENND4A-204ENST00000562028 NME2P22392 152 aa9.27□□□□□ -0.93
DENND4A-204ENST00000562028 COL8A1P27658 744 aa9.27□□□□□ -0.93
DENND4A-204ENST00000562028 ZNF76P36508 570 aa9.27□□□□□ -0.93
DENND4A-204ENST00000562028 FANCCQ00597 558 aa9.27□□□□□ -0.93
DENND4A-204ENST00000562028 TRIM56Q9BRZ2 755 aaKnown RBP9.27□□□□□ -0.93
DENND4A-204ENST00000562028 NRSN2Q9GZP1 204 aa9.27□□□□□ -0.93
DENND4A-204ENST00000562028 CELA3AP09093 270 aa9.26□□□□□ -0.93
DENND4A-204ENST00000562028 FOXD4L6Q3SYB3 417 aaPredicted RBP9.26□□□□□ -0.93
DENND4A-204ENST00000562028 IGF2-ASQ6U949 168 aa9.26□□□□□ -0.93
DENND4A-204ENST00000562028 FOXD4L3Q6VB84 417 aaPredicted RBP9.26□□□□□ -0.93
DENND4A-204ENST00000562028 HS2ST1Q7LGA3 356 aa9.25□□□□□ -0.93
DENND4A-204ENST00000562028 RNF34Q969K3 372 aa9.25□□□□□ -0.93
DENND4A-204ENST00000562028 RSRP1Q9BUV0 290 aa9.25□□□□□ -0.93
DENND4A-204ENST00000562028 EMILIN2Q9BXX0 1053 aa9.25□□□□□ -0.93
DENND4A-204ENST00000562028 KCNK4Q9NYG8 393 aa9.25□□□□□ -0.93
DENND4A-204ENST00000562028 DDX3YO15523 660 aaKnown RBP9.24□□□□□ -0.93
DENND4A-204ENST00000562028 ADAM11O75078 769 aa9.24□□□□□ -0.93
DENND4A-204ENST00000562028 PAGE1O75459 146 aa9.24□□□□□ -0.93
DENND4A-204ENST00000562028 TCF3P15923 654 aa9.24□□□□□ -0.93
DENND4A-204ENST00000562028 BMP6P22004 513 aa9.24□□□□□ -0.93
DENND4A-204ENST00000562028 ARNTP27540 789 aa9.24□□□□□ -0.93
DENND4A-204ENST00000562028 NLRP12P59046 1061 aa9.24□□□□□ -0.93
DENND4A-204ENST00000562028 POU4F3Q15319 338 aa9.24□□□□□ -0.93
DENND4A-204ENST00000562028 SULF2Q8IWU5 870 aa9.24□□□□□ -0.93
DENND4A-204ENST00000562028 IGSF5Q9NSI5 407 aa9.24□□□□□ -0.93
DENND4A-204ENST00000562028 RPS26P62854 115 aaKnown RBP9.23□□□□□ -0.93
DENND4A-204ENST00000562028 PWP1Q13610 501 aa9.23□□□□□ -0.93
DENND4A-204ENST00000562028 GRIK4Q16099 956 aa9.23□□□□□ -0.93
DENND4A-204ENST00000562028 PCNX4Q63HM2 1172 aa9.23□□□□□ -0.93
DENND4A-204ENST00000562028 ERMP1Q7Z2K6 904 aa9.23□□□□□ -0.93
DENND4A-204ENST00000562028 NACC1Q96RE7 527 aa9.23□□□□□ -0.93
DENND4A-204ENST00000562028 CORO1BQ9BR76 489 aa9.23□□□□□ -0.93
DENND4A-204ENST00000562028 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
DENND4A-204ENST00000562028 CYP8B1Q9UNU6 501 aa9.23□□□□□ -0.93
DENND4A-204ENST00000562028 MAOBP27338 520 aa9.22□□□□□ -0.93
DENND4A-204ENST00000562028 LIG3P49916 1009 aa9.22□□□□□ -0.93
DENND4A-204ENST00000562028 HDLBPQ00341 1268 aaKnown RBP9.22□□□□□ -0.93
DENND4A-204ENST00000562028 LRRC14Q15048 493 aa9.22□□□□□ -0.93
DENND4A-204ENST00000562028 DUOXA2Q1HG44 320 aa9.22□□□□□ -0.93
DENND4A-204ENST00000562028 SCARA3Q6AZY7 606 aa9.22□□□□□ -0.93
DENND4A-204ENST00000562028 TTBK2Q6IQ55 1244 aa9.22□□□□□ -0.93
DENND4A-204ENST00000562028 PDZD3Q86UT5 571 aa9.22□□□□□ -0.93
DENND4A-204ENST00000562028 STK35Q8TDR2 534 aa9.22□□□□□ -0.93
DENND4A-204ENST00000562028 LENG1Q96BZ8 264 aaPredicted RBP9.22□□□□□ -0.93
DENND4A-204ENST00000562028 GGT7Q9UJ14 662 aa9.22□□□□□ -0.93
DENND4A-204ENST00000562028 LOC100289279A0A1B0GTE1 492 aa9.21□□□□□ -0.94
DENND4A-204ENST00000562028 GSTP1P09211 210 aaKnown RBP9.21□□□□□ -0.94
DENND4A-204ENST00000562028 SELPP16109 830 aa9.21□□□□□ -0.94
DENND4A-204ENST00000562028 ZNF252P-AS1Q0IIN9 211 aa9.21□□□□□ -0.94
DENND4A-204ENST00000562028 HP1BP3Q5SSJ5 553 aaPredicted RBP9.21□□□□□ -0.94
DENND4A-204ENST00000562028 AGMOQ6ZNB7 445 aa9.21□□□□□ -0.94
DENND4A-204ENST00000562028 METTL16Q86W50 562 aaKnown RBP9.21□□□□□ -0.94
DENND4A-204ENST00000562028 RELL1Q8IUW5 271 aa9.21□□□□□ -0.94
DENND4A-204ENST00000562028 TMEM130Q8N3G9 435 aa9.21□□□□□ -0.94
DENND4A-204ENST00000562028 USP26Q9BXU7 913 aa9.21□□□□□ -0.94
DENND4A-204ENST00000562028 C9orf172C9J069 976 aa9.2□□□□□ -0.94
DENND4A-204ENST00000562028 APBA3O96018 575 aa9.2□□□□□ -0.94
DENND4A-204ENST00000562028 NRG1Q02297 640 aaPredicted RBP9.2□□□□□ -0.94
DENND4A-204ENST00000562028 MAP3K11Q16584 847 aa9.2□□□□□ -0.94
DENND4A-204ENST00000562028 SHISA2Q6UWI4 295 aa9.2□□□□□ -0.94
DENND4A-204ENST00000562028 TMEM74Q96NL1 305 aa9.2□□□□□ -0.94
DENND4A-204ENST00000562028 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
DENND4A-204ENST00000562028 KRT82Q9NSB4 513 aa9.2□□□□□ -0.94
DENND4A-204ENST00000562028 WISP1O95388 367 aa9.19□□□□□ -0.94
DENND4A-204ENST00000562028 ECEL1O95672 775 aa9.19□□□□□ -0.94
DENND4A-204ENST00000562028 HNRNPUQ00839 825 aaKnown RBP eCLIP9.19□□□□□ -0.94
DENND4A-204ENST00000562028 LLGL2Q6P1M3 1020 aa9.19□□□□□ -0.94
DENND4A-204ENST00000562028 PHC3Q8NDX5 983 aa9.19□□□□□ -0.94
DENND4A-204ENST00000562028 UBASH3BQ8TF42 649 aa9.19□□□□□ -0.94
DENND4A-204ENST00000562028 MEGF11A6BM72 1044 aa9.18□□□□□ -0.94
DENND4A-204ENST00000562028 KCNMA1Q12791 1236 aa9.18□□□□□ -0.94
DENND4A-204ENST00000562028 EXOSC6Q5RKV6 272 aaKnown RBP9.18□□□□□ -0.94
DENND4A-204ENST00000562028 RASIP1Q5U651 963 aa9.18□□□□□ -0.94
DENND4A-204ENST00000562028 KIAA1211Q6ZU35 1233 aa9.18□□□□□ -0.94
DENND4A-204ENST00000562028 ACAD11Q709F0 780 aa9.18□□□□□ -0.94
DENND4A-204ENST00000562028 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.18□□□□□ -0.94
DENND4A-204ENST00000562028 GRIN3AQ8TCU5 1115 aa9.18□□□□□ -0.94
DENND4A-204ENST00000562028 COPRSQ9NQ92 184 aa9.18□□□□□ -0.94
DENND4A-204ENST00000562028 KBTBD4Q9NVX7 518 aa9.18□□□□□ -0.94
DENND4A-204ENST00000562028 CACNA2D2Q9NY47 1150 aa9.18□□□□□ -0.94
DENND4A-204ENST00000562028 TRIM37O94972 964 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 DLGAP3O95886 979 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 CTSBP07858 339 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 GBP2P32456 591 aaPredicted RBP9.17□□□□□ -0.94
DENND4A-204ENST00000562028 NT5DC4Q86YG4 428 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 KCNB2Q92953 911 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 DCAF5Q96JK2 942 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 RUSC1Q9BVN2 902 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 TMPRSS13Q9BYE2 586 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 RNF208Q9H0X6 261 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 CCDC86Q9H6F5 360 aaKnown RBP9.17□□□□□ -0.94
DENND4A-204ENST00000562028 USP21Q9UK80 565 aa9.17□□□□□ -0.94
DENND4A-204ENST00000562028 TLR6Q9Y2C9 796 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms