RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 DHX37Q8IY37 1157 aaKnown RBP7.92□□□□□ -1.14
CAPN3-210ENST00000561817 KCNV2Q8TDN2 545 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 KCNB2Q92953 911 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 EDC3Q96F86 508 aaKnown RBP7.92□□□□□ -1.14
CAPN3-210ENST00000561817 CEP126Q9P2H0 1117 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 PALD1Q9ULE6 856 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 ABCC12Q96J65 1359 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 MED23Q9ULK4 1368 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 A0A1B0GUL6 1792 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 AKAP11Q9UKA4 1901 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 PLSCR1O15162 318 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 HSPA4P34932 840 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 DDIT3P35638 169 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 ANAPC15P60006 121 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 BECN1Q14457 450 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 RABEP1Q15276 862 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 ERFEQ4G0M1 354 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 LDHAL6AQ6ZMR3 332 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 XAGE2Q96GT9 111 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 ZNF512BQ96KM6 892 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-210ENST00000561817 SEC31BQ9NQW1 1179 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 RTCBQ9Y3I0 505 aaKnown RBP7.91□□□□□ -1.14
CAPN3-210ENST00000561817 RAD50Q92878 1312 aa7.91□□□□□ -1.14
CAPN3-210ENST00000561817 A0A0D9SFI3 127 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 FAM177BA6PVY3 158 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 C3orf80F5H4A9 247 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 PDE8BO95263 885 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 PTH1RQ03431 593 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 NMIQ13287 307 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-210ENST00000561817 ZNF827Q17R98 1081 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 NUDT18Q6ZVK8 323 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 FAM227BQ96M60 508 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 AKAP2Q9Y2D5 859 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 NDUFB9Q9Y6M9 179 aa7.9□□□□□ -1.14
CAPN3-210ENST00000561817 TNRC6CQ9HCJ0 1690 aaKnown RBP7.89□□□□□ -1.15
CAPN3-210ENST00000561817 MROH5Q6ZUA9 1318 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 HIP1O00291 1037 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 CHGBP05060 677 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 TM4SF1P30408 202 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 SCARF1Q14162 830 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 ATP2B3Q16720 1220 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 CCDC152Q4G0S7 254 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 TAF7LQ5H9L4 462 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 METTL24Q5JXM2 366 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 CWC27Q6UX04 472 aaKnown RBP7.89□□□□□ -1.15
CAPN3-210ENST00000561817 KBTBD3Q8NAB2 608 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 IL27Q8NEV9 243 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 NEUROD6Q96NK8 337 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 ANO2Q9NQ90 1003 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 DIAPH3Q9NSV4 1193 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 TFCP2L1Q9NZI6 479 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 TAF1P21675 1872 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 CACNA1SQ13698 1873 aa7.89□□□□□ -1.15
CAPN3-210ENST00000561817 CCDC171Q6TFL3 1326 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.88□□□□□ -1.15
CAPN3-210ENST00000561817 ZPR1O75312 459 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 TAF5LO75529 589 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 GYS1P13807 737 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 SSFA2P28290 1259 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 ARID4AP29374 1257 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-210ENST00000561817 NFIXQ14938 502 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 NECTIN1Q15223 517 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 TRAPPC3LQ5T215 181 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 DDX46Q7L014 1031 aaKnown RBP7.88□□□□□ -1.15
CAPN3-210ENST00000561817 ZNF589Q86UQ0 364 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-210ENST00000561817 RUFY2Q8WXA3 655 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 MAP4K1Q92918 833 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 SETDB2Q96T68 719 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 ANP32EQ9BTT0 268 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 FSD1Q9BTV5 496 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 NYXQ9GZU5 481 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 CNNM1Q9NRU3 951 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 PAG1Q9NWQ8 432 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 SNX14Q9Y5W7 946 aa7.88□□□□□ -1.15
CAPN3-210ENST00000561817 K7ELQ4 463 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-210ENST00000561817 SNAP23O00161 211 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 GOLIM4O00461 696 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 ZMYND10O75800 440 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 IFIT1P09914 478 aaKnown RBP7.87□□□□□ -1.15
CAPN3-210ENST00000561817 RFC4P35249 363 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 MCAMP43121 646 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 PUM3Q15397 648 aaKnown RBP7.87□□□□□ -1.15
CAPN3-210ENST00000561817 SLC15A2Q16348 729 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 ZMYM1Q5SVZ6 1142 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 BICDL1Q6ZP65 573 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 HSCBQ8IWL3 235 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 TTC13Q8NBP0 860 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 HELBQ8NG08 1087 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-210ENST00000561817 LPIN2Q92539 896 aa7.87□□□□□ -1.15
CAPN3-210ENST00000561817 DNAJC2Q99543 621 aaKnown RBP7.87□□□□□ -1.15
CAPN3-210ENST00000561817 NPDC1Q9NQX5 325 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-210ENST00000561817 CARMIL3Q8ND23 1372 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 IRS2Q9Y4H2 1338 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 RNF40O75150 1001 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 ZBTB7AO95365 584 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 MCCP23508 829 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 ZAP70P43403 619 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 PHKA1P46020 1223 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 CHRNDQ07001 517 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 TSGA10IPQ3SY00 556 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms