RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 TRAPPC3LQ5T215 181 aa4.97□□□□□ -1.61
SPG11-225ENST00000561391 SAMD5Q5TGI4 173 aa4.97□□□□□ -1.61
SPG11-225ENST00000561391 GAS2L2Q8NHY3 880 aa4.97□□□□□ -1.61
SPG11-225ENST00000561391 RRP7BPQ9NSQ0 103 aa4.97□□□□□ -1.61
SPG11-225ENST00000561391 ZNF358Q9NW07 568 aa4.97□□□□□ -1.61
SPG11-225ENST00000561391 STK32BQ9NY57 414 aa4.97□□□□□ -1.61
SPG11-225ENST00000561391 USP35Q9P2H5 1018 aa4.97□□□□□ -1.61
SPG11-225ENST00000561391 TNS2Q63HR2 1409 aa4.97□□□□□ -1.61
SPG11-225ENST00000561391 CASKIN1Q8WXD9 1431 aa4.97□□□□□ -1.61
SPG11-225ENST00000561391 METP08581 1390 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 KANK1Q14678 1352 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 MYO5BQ9ULV0 1848 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 TMEM88BA6NKF7 163 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 BACH1O14867 736 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 EFSO43281 561 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 PRMT3O60678 531 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 TOMM70O94826 608 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 DKK1O94907 266 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 MBTPS1Q14703 1052 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 SLC15A2Q16348 729 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 TBCELQ5QJ74 424 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 C8orf86Q6ZUL3 223 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 TXNRD3Q86VQ6 643 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 AEBP1Q8IUX7 1158 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 TP53INP1Q96A56 240 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 PRIMPOLQ96LW4 560 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 NEUROD4Q9HD90 331 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 PRDM6Q9NQX0 595 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 TMEM131LA2VDJ0 1609 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 LAMC1P11047 1609 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 CASZ1Q86V15 1759 aa4.96□□□□□ -1.62
SPG11-225ENST00000561391 PXDNQ92626 1479 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 LRPPRCP42704 1394 aaKnown RBP4.95□□□□□ -1.62
SPG11-225ENST00000561391 ADARB2-AS1A8MUL3 147 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 PLSCR1O15162 318 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 NID1P14543 1247 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 ADH7P40394 386 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 RAC1P63000 192 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 NRG1Q02297 640 aaPredicted RBP4.95□□□□□ -1.62
SPG11-225ENST00000561391 ADGRE1Q14246 886 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 MCTP1Q6DN14 999 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 PTF1AQ7RTS3 328 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 MICALL1Q8N3F8 863 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 TNFRSF25Q93038 417 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 USTQ9Y2C2 406 aa4.95□□□□□ -1.62
SPG11-225ENST00000561391 USP32Q8NFA0 1604 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 PLCH1Q4KWH8 1693 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 A6NJY4 79 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 LILRB5O75023 590 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 ELNP15502 786 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 TBC1D8BQ0IIM8 1120 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 COL9A3Q14050 684 aaPredicted RBP4.94□□□□□ -1.62
SPG11-225ENST00000561391 LRRC69Q6ZNQ3 347 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 PARP3Q9Y6F1 533 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 NALCNQ8IZF0 1738 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 ADGRL2O95490 1459 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 PTPN23Q9H3S7 1636 aa4.94□□□□□ -1.62
SPG11-225ENST00000561391 MAP3K5Q99683 1374 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 CDK2AP1O14519 115 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 SELPP16109 830 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 POLD1P28340 1107 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 SWI5Q1ZZU3 235 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 RAB44Q7Z6P3 723 aaPredicted RBP4.93□□□□□ -1.62
SPG11-225ENST00000561391 SCG3Q8WXD2 468 aaKnown RBP4.93□□□□□ -1.62
SPG11-225ENST00000561391 MDFIQ99750 246 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 TRAIPQ9BWF2 469 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 TSPAN10Q9H1Z9 355 aaPredicted RBP4.93□□□□□ -1.62
SPG11-225ENST00000561391 STARD13Q9Y3M8 1113 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 FYCO1Q9BQS8 1478 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 SPATA31A1Q5TZJ5 1347 aa4.93□□□□□ -1.62
SPG11-225ENST00000561391 NWD2Q9ULI1 1742 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 ARID1BQ8NFD5 2236 aaPredicted RBP4.92□□□□□ -1.62
SPG11-225ENST00000561391 A0A0A0MRY4 1105 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 CCDC85CA6NKD9 419 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 M0R2N6 131 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 ATP2B4P23634 1241 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 SCNN1AP37088 669 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 TXLNAP40222 546 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 EVA1CP58658 441 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 SPEM2Q0P670 501 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 TXNRD1Q16881 649 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 ZNF326Q5BKZ1 582 aaKnown RBP4.92□□□□□ -1.62
SPG11-225ENST00000561391 SHISA2Q6UWI4 295 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 SLC9A9Q8IVB4 645 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 PMFBP1Q8TBY8 1022 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 CLP1Q92989 425 aaKnown RBP4.92□□□□□ -1.62
SPG11-225ENST00000561391 SLC4A9Q96Q91 983 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 SLC30A3Q99726 388 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 MKNK1Q9BUB5 465 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 IQSEC3Q9UPP2 1182 aaPredicted RBP4.92□□□□□ -1.62
SPG11-225ENST00000561391 USP3Q9Y6I4 520 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 EIF2AK4Q9P2K8 1649 aaKnown RBP4.92□□□□□ -1.62
SPG11-225ENST00000561391 GOLGB1Q14789 3259 aaKnown RBP4.92□□□□□ -1.62
SPG11-225ENST00000561391 WDR90Q96KV7 1748 aa4.92□□□□□ -1.62
SPG11-225ENST00000561391 PPP1R12BO60237 982 aaPredicted RBP4.91□□□□□ -1.62
SPG11-225ENST00000561391 SFSWAPQ12872 951 aaKnown RBP4.91□□□□□ -1.62
SPG11-225ENST00000561391 MTFR1Q15390 333 aa4.91□□□□□ -1.62
SPG11-225ENST00000561391 C16orf71Q8IYS4 520 aaPredicted RBP4.91□□□□□ -1.62
SPG11-225ENST00000561391 ZNF295-AS1Q8N0V1 137 aa4.91□□□□□ -1.62
SPG11-225ENST00000561391 VTI1AQ96AJ9 217 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms