RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 DACT2Q5SW24 774 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 SAPCD2Q86UD0 394 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 TRMT2AQ8IZ69 625 aaKnown RBP9.38□□□□□ -0.91
ZEB1-223ENST00000561304 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
ZEB1-223ENST00000561304 MPHOSPH8Q99549 860 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 SRCIN1Q9C0H9 1055 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 GGA3Q9NZ52 723 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 SCAF8Q9UPN6 1271 aaKnown RBP9.38□□□□□ -0.91
ZEB1-223ENST00000561304 UTYO14607 1347 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 CCER2I3L3R5 266 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 AOC2O75106 756 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 GRM1Q13255 1194 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
ZEB1-223ENST00000561304 CDC37L1Q7L3B6 337 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 PODNQ7Z5L7 613 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 AGBL3Q8NEM8 1001 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 FBXW7Q969H0 707 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 CAPNS2Q96L46 248 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 C9orf78Q9NZ63 289 aaPredicted RBP9.37□□□□□ -0.91
ZEB1-223ENST00000561304 LEMD3Q9Y2U8 911 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
ZEB1-223ENST00000561304 ANGEL2Q5VTE6 544 aaKnown RBP9.37□□□□□ -0.91
ZEB1-223ENST00000561304 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 ANKRD44Q8N8A2 993 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 ANKRD2Q9GZV1 360 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 COA1Q9GZY4 146 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 BICC1Q9H694 974 aaKnown RBP9.37□□□□□ -0.91
ZEB1-223ENST00000561304 MYOZ2Q9NPC6 264 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 WBP1LQ9NX94 342 aa9.37□□□□□ -0.91
ZEB1-223ENST00000561304 PTPRCP08575 1304 aa9.36□□□□□ -0.91
ZEB1-223ENST00000561304 USP17L8P0C7I0 530 aa9.36□□□□□ -0.91
ZEB1-223ENST00000561304 FOSBP53539 338 aa9.36□□□□□ -0.91
ZEB1-223ENST00000561304 SCARF1Q14162 830 aa9.36□□□□□ -0.91
ZEB1-223ENST00000561304 NBPF9Q3BBW0 867 aa9.36□□□□□ -0.91
ZEB1-223ENST00000561304 CERS5Q8N5B7 392 aa9.36□□□□□ -0.91
ZEB1-223ENST00000561304 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
ZEB1-223ENST00000561304 ZIC5Q96T25 663 aa9.36□□□□□ -0.91
ZEB1-223ENST00000561304 PUS3Q9BZE2 481 aaKnown RBP9.36□□□□□ -0.91
ZEB1-223ENST00000561304 PLIN1O60240 522 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 SASH1O94885 1247 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
ZEB1-223ENST00000561304 KCNJ4P48050 445 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 GTF2IP78347 998 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 CCDC57Q2TAC2 916 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 ALDH1L2Q3SY69 923 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 RABL6Q3YEC7 729 aaPredicted RBP9.35□□□□□ -0.91
ZEB1-223ENST00000561304 STRIP1Q5VSL9 837 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 LDHAL6AQ6ZMR3 332 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 C15orf52Q6ZUT6 534 aaKnown RBP9.35□□□□□ -0.91
ZEB1-223ENST00000561304 ZNF454Q8N9F8 522 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 DCPSQ96C86 337 aaKnown RBP9.35□□□□□ -0.91
ZEB1-223ENST00000561304 CDCA5Q96FF9 252 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 CD209Q9NNX6 404 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 SMC4Q9NTJ3 1288 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 JAG2Q9Y219 1238 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 PCDHAC2Q9Y5I4 1007 aa9.35□□□□□ -0.91
ZEB1-223ENST00000561304 AOX1Q06278 1338 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 ECE1P42892 770 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 LBX1P52954 281 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 HUNKP57058 714 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 LRRC24Q50LG9 513 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 TAF7LQ5H9L4 462 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 TTLL5Q6EMB2 1281 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 KIAA0825Q8IV33 1275 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 KLHDC4Q8TBB5 520 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 USP44Q9H0E7 712 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 GBA2Q9HCG7 927 aaPredicted RBP9.34□□□□□ -0.91
ZEB1-223ENST00000561304 CNNM1Q9NRU3 951 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 TSKSQ9UJT2 592 aa9.34□□□□□ -0.91
ZEB1-223ENST00000561304 MYO3BQ8WXR4 1341 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 PITPNM2Q9BZ72 1349 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 SSC5DA1L4H1 1573 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 FAM155AB1AL88 458 aaPredicted RBP9.33□□□□□ -0.92
ZEB1-223ENST00000561304 WNT10BO00744 389 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 IL1R1P14778 569 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 PRAMEF18Q5VWM3 479 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 MOB2Q70IA6 237 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 SULF1Q8IWU6 871 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 AIDAQ96BJ3 306 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 ZBED3Q96IU2 234 aaPredicted RBP9.33□□□□□ -0.92
ZEB1-223ENST00000561304 HHIPL1Q96JK4 782 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 RIPOR2Q9Y4F9 1068 aa9.33□□□□□ -0.92
ZEB1-223ENST00000561304 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
ZEB1-223ENST00000561304 GYG1P46976 350 aa9.32□□□□□ -0.92
ZEB1-223ENST00000561304 CTCFP49711 727 aaPredicted RBP9.32□□□□□ -0.92
ZEB1-223ENST00000561304 MAP2K1Q02750 393 aaPredicted RBP9.32□□□□□ -0.92
ZEB1-223ENST00000561304 ZNF804AQ7Z570 1209 aa9.32□□□□□ -0.92
ZEB1-223ENST00000561304 VGLL2Q8N8G2 317 aa9.32□□□□□ -0.92
ZEB1-223ENST00000561304 NOB1Q9ULX3 412 aaKnown RBP9.32□□□□□ -0.92
ZEB1-223ENST00000561304 COL1A1P02452 1464 aaPredicted RBP9.31□□□□□ -0.92
ZEB1-223ENST00000561304 MYH2Q9UKX2 1941 aa9.31□□□□□ -0.92
ZEB1-223ENST00000561304 F8W031 263 aaPredicted RBP9.31□□□□□ -0.92
ZEB1-223ENST00000561304 RFX5P48382 616 aaPredicted RBP9.31□□□□□ -0.92
ZEB1-223ENST00000561304 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
ZEB1-223ENST00000561304 FAM84BQ96KN1 310 aaPredicted RBP9.31□□□□□ -0.92
ZEB1-223ENST00000561304 PRDM10Q9NQV6 1147 aa9.31□□□□□ -0.92
ZEB1-223ENST00000561304 TNNQ9UQP3 1299 aa9.31□□□□□ -0.92
ZEB1-223ENST00000561304 MYO5AQ9Y4I1 1855 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms