RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TRIM34Q9BYJ4 488 aa12.98□□□□□ -0.33
TPM1-229ENST00000561242 LNPKQ9C0E8 428 aa12.98□□□□□ -0.33
TPM1-229ENST00000561242 ZNF408Q9H9D4 720 aa12.98□□□□□ -0.33
TPM1-229ENST00000561242 MYH3P11055 1940 aa12.98□□□□□ -0.33
TPM1-229ENST00000561242 SALL1Q9NSC2 1324 aa12.97□□□□□ -0.33
TPM1-229ENST00000561242 GOLIM4O00461 696 aa12.97□□□□□ -0.33
TPM1-229ENST00000561242 MX1P20591 662 aa12.97□□□□□ -0.33
TPM1-229ENST00000561242 ZAP70P43403 619 aa12.97□□□□□ -0.33
TPM1-229ENST00000561242 SUPT20HL1Q3ZLR7 823 aa12.97□□□□□ -0.33
TPM1-229ENST00000561242 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
TPM1-229ENST00000561242 HHIPL2Q6UWX4 724 aa12.97□□□□□ -0.33
TPM1-229ENST00000561242 ZSCAN29Q8IWY8 852 aaPredicted RBP12.97□□□□□ -0.33
TPM1-229ENST00000561242 USP40Q9NVE5 1235 aa12.97□□□□□ -0.33
TPM1-229ENST00000561242 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
TPM1-229ENST00000561242 ZNF609O15014 1411 aa12.96□□□□□ -0.33
TPM1-229ENST00000561242 SNED1Q8TER0 1413 aa12.96□□□□□ -0.33
TPM1-229ENST00000561242 KIF3CO14782 793 aa12.96□□□□□ -0.33
TPM1-229ENST00000561242 CYP7A1P22680 504 aa12.96□□□□□ -0.33
TPM1-229ENST00000561242 MCAMP43121 646 aa12.96□□□□□ -0.33
TPM1-229ENST00000561242 MAP1SQ66K74 1059 aaPredicted RBP12.96□□□□□ -0.33
TPM1-229ENST00000561242 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
TPM1-229ENST00000561242 USP48Q86UV5 1035 aa12.96□□□□□ -0.33
TPM1-229ENST00000561242 C2orf69Q8N8R5 385 aa12.96□□□□□ -0.33
TPM1-229ENST00000561242 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
TPM1-229ENST00000561242 GGA3Q9NZ52 723 aa12.96□□□□□ -0.33
TPM1-229ENST00000561242 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
TPM1-229ENST00000561242 MAP4K4O95819 1239 aaPredicted RBP12.95□□□□□ -0.34
TPM1-229ENST00000561242 IGHDP01880 384 aa12.95□□□□□ -0.34
TPM1-229ENST00000561242 USP5P45974 858 aa12.95□□□□□ -0.34
TPM1-229ENST00000561242 NUCB1Q02818 461 aa12.95□□□□□ -0.34
TPM1-229ENST00000561242 SLC9C2Q5TAH2 1124 aa12.95□□□□□ -0.34
TPM1-229ENST00000561242 TBC1D9Q6ZT07 1266 aa12.95□□□□□ -0.34
TPM1-229ENST00000561242 RILPL2Q969X0 211 aa12.95□□□□□ -0.34
TPM1-229ENST00000561242 GMLQ99445 158 aa12.95□□□□□ -0.34
TPM1-229ENST00000561242 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
TPM1-229ENST00000561242 TLR7Q9NYK1 1049 aaKnown RBP12.95□□□□□ -0.34
TPM1-229ENST00000561242 BRCA1P38398 1863 aaKnown RBP12.94□□□□□ -0.34
TPM1-229ENST00000561242 FER1L6Q2WGJ9 1857 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 CLRN2A0PK11 232 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 WNT10BO00744 389 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 ZBTB22O15209 634 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 PPP1R12BO60237 982 aaPredicted RBP12.94□□□□□ -0.34
TPM1-229ENST00000561242 ZFYP08048 801 aaPredicted RBP12.94□□□□□ -0.34
TPM1-229ENST00000561242 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 PRDX5P30044 214 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 MECOMQ03112 1051 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 MAGEB6Q8N7X4 407 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 TRPM4Q8TD43 1214 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 HAUS7Q99871 368 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
TPM1-229ENST00000561242 ABT1Q9ULW3 272 aaKnown RBP12.94□□□□□ -0.34
TPM1-229ENST00000561242 PPP2R3BQ9Y5P8 575 aa12.94□□□□□ -0.34
TPM1-229ENST00000561242 PITPNM2Q9BZ72 1349 aa12.93□□□□□ -0.34
TPM1-229ENST00000561242 IRS2Q9Y4H2 1338 aa12.93□□□□□ -0.34
TPM1-229ENST00000561242 POTECB2RU33 542 aa12.93□□□□□ -0.34
TPM1-229ENST00000561242 TCP10L2B9ZVM9 353 aa12.93□□□□□ -0.34
TPM1-229ENST00000561242 HIP1O00291 1037 aa12.93□□□□□ -0.34
TPM1-229ENST00000561242 NBPF9Q3BBW0 867 aa12.93□□□□□ -0.34
TPM1-229ENST00000561242 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
TPM1-229ENST00000561242 ARMC9Q7Z3E5 817 aa12.93□□□□□ -0.34
TPM1-229ENST00000561242 CERS5Q8N5B7 392 aa12.93□□□□□ -0.34
TPM1-229ENST00000561242 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
TPM1-229ENST00000561242 BTDP43251 543 aa12.92□□□□□ -0.34
TPM1-229ENST00000561242 MFAP1P55081 439 aaKnown RBP12.92□□□□□ -0.34
TPM1-229ENST00000561242 DCAF15Q66K64 600 aa12.92□□□□□ -0.34
TPM1-229ENST00000561242 TEX11Q8IYF3 940 aa12.92□□□□□ -0.34
TPM1-229ENST00000561242 AIDAQ96BJ3 306 aa12.92□□□□□ -0.34
TPM1-229ENST00000561242 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
TPM1-229ENST00000561242 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
TPM1-229ENST00000561242 CRNKL1Q9BZJ0 848 aaKnown RBP12.92□□□□□ -0.34
TPM1-229ENST00000561242 ZNF70Q9UC06 446 aaPredicted RBP12.92□□□□□ -0.34
TPM1-229ENST00000561242 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 MAGEB6P1A0A0J9YX57 407 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 TMEM88BA6NKF7 163 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 CELF2O95319 508 aaKnown RBP12.91□□□□□ -0.34
TPM1-229ENST00000561242 APPP05067 770 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 HLA-DOAP06340 250 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 APLP1P51693 650 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 PICALMQ13492 652 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 DIXDC1Q155Q3 683 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 GLIS2Q9BZE0 524 aaPredicted RBP12.91□□□□□ -0.34
TPM1-229ENST00000561242 DEFB129Q9H1M3 183 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.91□□□□□ -0.34
TPM1-229ENST00000561242 TAF1P21675 1872 aa12.91□□□□□ -0.34
TPM1-229ENST00000561242 MROH7-TTC4A0A0A0MT08 1334 aa12.9□□□□□ -0.34
TPM1-229ENST00000561242 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.34
TPM1-229ENST00000561242 CHD4Q14839 1912 aa12.9□□□□□ -0.34
TPM1-229ENST00000561242 SHTN1A0MZ66 631 aa12.9□□□□□ -0.34
TPM1-229ENST00000561242 IREB2P48200 963 aaKnown RBP12.9□□□□□ -0.34
TPM1-229ENST00000561242 PDE1AP54750 535 aa12.9□□□□□ -0.34
TPM1-229ENST00000561242 NSUN4Q96CB9 384 aaKnown RBP12.9□□□□□ -0.34
TPM1-229ENST00000561242 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.34
TPM1-229ENST00000561242 NACAP1Q9BZK3 213 aa12.9□□□□□ -0.34
TPM1-229ENST00000561242 DIAPH3Q9NSV4 1193 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms