RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 NFICP08651 508 aa7.85□□□□□ -1.15
USP8-216ENST00000561206 OGFOD3Q6PK18 319 aa7.85□□□□□ -1.15
USP8-216ENST00000561206 GPR152Q8TDT2 470 aa7.85□□□□□ -1.15
USP8-216ENST00000561206 HHIPQ96QV1 700 aa7.85□□□□□ -1.15
USP8-216ENST00000561206 GSX1Q9H4S2 264 aaPredicted RBP7.85□□□□□ -1.15
USP8-216ENST00000561206 ACSS3Q9H6R3 686 aa7.85□□□□□ -1.15
USP8-216ENST00000561206 C1GALT1Q9NS00 363 aa7.85□□□□□ -1.15
USP8-216ENST00000561206 FAM53CQ9NYF3 392 aa7.85□□□□□ -1.15
USP8-216ENST00000561206 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.85□□□□□ -1.15
USP8-216ENST00000561206 ACTL7BQ9Y614 415 aa7.85□□□□□ -1.15
USP8-216ENST00000561206 CD8BP10966 210 aa7.84□□□□□ -1.15
USP8-216ENST00000561206 BUD31P41223 144 aaPredicted RBP7.84□□□□□ -1.15
USP8-216ENST00000561206 RAP1GAPP47736 663 aa7.84□□□□□ -1.15
USP8-216ENST00000561206 XKR5Q6UX68 686 aa7.84□□□□□ -1.15
USP8-216ENST00000561206 LRRN4CLQ8ND94 238 aa7.84□□□□□ -1.15
USP8-216ENST00000561206 ZSCAN18Q8TBC5 510 aaPredicted RBP7.84□□□□□ -1.15
USP8-216ENST00000561206 NXPE3Q969Y0 559 aa7.84□□□□□ -1.15
USP8-216ENST00000561206 BNIP3Q12983 259 aa7.83□□□□□ -1.16
USP8-216ENST00000561206 OCLNQ16625 522 aa7.83□□□□□ -1.16
USP8-216ENST00000561206 FLAD1Q8NFF5 587 aa7.83□□□□□ -1.16
USP8-216ENST00000561206 FAM200AQ8TCP9 573 aa7.83□□□□□ -1.16
USP8-216ENST00000561206 LRRC10BA6NIK2 292 aa7.82□□□□□ -1.16
USP8-216ENST00000561206 UBTFP17480 764 aaKnown RBP7.82□□□□□ -1.16
USP8-216ENST00000561206 SWI5Q1ZZU3 235 aa7.82□□□□□ -1.16
USP8-216ENST00000561206 VAV3Q9UKW4 847 aa7.82□□□□□ -1.16
USP8-216ENST00000561206 ESRRAP11474 423 aaPredicted RBP7.81□□□□□ -1.16
USP8-216ENST00000561206 LRRC56Q8IYG6 542 aaPredicted RBP7.81□□□□□ -1.16
USP8-216ENST00000561206 PPP1R16BQ96T49 567 aa7.81□□□□□ -1.16
USP8-216ENST00000561206 TRPA1O75762 1119 aa7.8□□□□□ -1.16
USP8-216ENST00000561206 PRKCQQ04759 706 aa7.8□□□□□ -1.16
USP8-216ENST00000561206 NETO1Q8TDF5 533 aa7.8□□□□□ -1.16
USP8-216ENST00000561206 ZNF503-AS2A6NEH8 195 aa7.79□□□□□ -1.16
USP8-216ENST00000561206 ZBTB39O15060 712 aa7.79□□□□□ -1.16
USP8-216ENST00000561206 PRKCSHP14314 528 aaPredicted RBP7.79□□□□□ -1.16
USP8-216ENST00000561206 CES1P23141 567 aa7.79□□□□□ -1.16
USP8-216ENST00000561206 ZNF438Q7Z4V0 828 aa7.79□□□□□ -1.16
USP8-216ENST00000561206 C1orf127Q8N9H9 656 aa7.79□□□□□ -1.16
USP8-216ENST00000561206 BHLHE41Q9C0J9 482 aaPredicted RBP7.79□□□□□ -1.16
USP8-216ENST00000561206 STIM2Q9P246 746 aa7.79□□□□□ -1.16
USP8-216ENST00000561206 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
USP8-216ENST00000561206 ZSCAN22P10073 491 aaPredicted RBP7.78□□□□□ -1.16
USP8-216ENST00000561206 RAB6AP20340 208 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 FLIIQ13045 1269 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 CYP27C1Q4G0S4 372 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 AMIGO3Q86WK7 504 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 PLD6Q8N2A8 252 aaKnown RBP7.78□□□□□ -1.16
USP8-216ENST00000561206 FNBP4Q8N3X1 1017 aaPredicted RBP7.78□□□□□ -1.16
USP8-216ENST00000561206 ABTB2Q8N961 1025 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 PI4K2BQ8TCG2 481 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 PMEPA1Q969W9 287 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 PRIMPOLQ96LW4 560 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 FAM105AQ9NUU6 356 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 LMCD1Q9NZU5 365 aa7.78□□□□□ -1.16
USP8-216ENST00000561206 ZSWIM9Q86XI8 627 aa7.77□□□□□ -1.17
USP8-216ENST00000561206 CHRDQ9H2X0 955 aa7.77□□□□□ -1.17
USP8-216ENST00000561206 JAG2Q9Y219 1238 aa7.77□□□□□ -1.17
USP8-216ENST00000561206 ACIN1Q9UKV3 1341 aaKnown RBP7.77□□□□□ -1.17
USP8-216ENST00000561206 DYNC1LI2O43237 492 aaPredicted RBP7.76□□□□□ -1.17
USP8-216ENST00000561206 NUDT16Q96DE0 195 aaKnown RBP7.76□□□□□ -1.17
USP8-216ENST00000561206 ZKSCAN3Q9BRR0 538 aa7.76□□□□□ -1.17
USP8-216ENST00000561206 MKNK2Q9HBH9 465 aa7.76□□□□□ -1.17
USP8-216ENST00000561206 LMOD1P29536 600 aaPredicted RBP7.75□□□□□ -1.17
USP8-216ENST00000561206 HP1BP3Q5SSJ5 553 aaPredicted RBP7.75□□□□□ -1.17
USP8-216ENST00000561206 SLC23A3Q6PIS1 610 aa7.75□□□□□ -1.17
USP8-216ENST00000561206 OSMRQ99650 979 aa7.75□□□□□ -1.17
USP8-216ENST00000561206 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.74□□□□□ -1.17
USP8-216ENST00000561206 GSTM4Q03013 218 aa7.74□□□□□ -1.17
USP8-216ENST00000561206 MLANAQ16655 118 aa7.74□□□□□ -1.17
USP8-216ENST00000561206 CAPN12Q6ZSI9 719 aa7.74□□□□□ -1.17
USP8-216ENST00000561206 ANKLE2Q86XL3 938 aa7.74□□□□□ -1.17
USP8-216ENST00000561206 CRIM1Q9NZV1 1036 aa7.74□□□□□ -1.17
USP8-216ENST00000561206 PRMT3O60678 531 aa7.73□□□□□ -1.17
USP8-216ENST00000561206 KRT1P04264 644 aa7.73□□□□□ -1.17
USP8-216ENST00000561206 FAM69CQ0P6D2 419 aa7.73□□□□□ -1.17
USP8-216ENST00000561206 SYNGAP1Q96PV0 1343 aa7.73□□□□□ -1.17
USP8-216ENST00000561206 CTSBP07858 339 aa7.72□□□□□ -1.17
USP8-216ENST00000561206 ASPAP45381 313 aa7.72□□□□□ -1.17
USP8-216ENST00000561206 IFI16Q16666 785 aaKnown RBP7.72□□□□□ -1.17
USP8-216ENST00000561206 DYMQ7RTS9 669 aa7.72□□□□□ -1.17
USP8-216ENST00000561206 CXXC1Q9P0U4 656 aaPredicted RBP7.72□□□□□ -1.17
USP8-216ENST00000561206 ECM1Q16610 540 aa7.71□□□□□ -1.18
USP8-216ENST00000561206 ANGEL2Q5VTE6 544 aaKnown RBP7.71□□□□□ -1.18
USP8-216ENST00000561206 ZFYVE1Q9HBF4 777 aa7.71□□□□□ -1.18
USP8-216ENST00000561206 CYP11A1P05108 521 aa7.7□□□□□ -1.18
USP8-216ENST00000561206 MAOBP27338 520 aa7.7□□□□□ -1.18
USP8-216ENST00000561206 CD96P40200 585 aa7.7□□□□□ -1.18
USP8-216ENST00000561206 KCNMB1Q16558 191 aa7.7□□□□□ -1.18
USP8-216ENST00000561206 NOVA2Q9UNW9 492 aaKnown RBP7.7□□□□□ -1.18
USP8-216ENST00000561206 EDN3P14138 238 aa7.69□□□□□ -1.18
USP8-216ENST00000561206 AKAP4Q5JQC9 854 aa7.69□□□□□ -1.18
USP8-216ENST00000561206 FAM181AQ8N9Y4 354 aa7.69□□□□□ -1.18
USP8-216ENST00000561206 HRASLS5Q96KN8 279 aa7.69□□□□□ -1.18
USP8-216ENST00000561206 DAGLAQ9Y4D2 1042 aa7.69□□□□□ -1.18
USP8-216ENST00000561206 U3KQE9 123 aa7.69□□□□□ -1.18
USP8-216ENST00000561206 NAA30Q147X3 362 aaPredicted RBP7.68□□□□□ -1.18
USP8-216ENST00000561206 AOC3Q16853 763 aa7.68□□□□□ -1.18
USP8-216ENST00000561206 SYDE1Q6ZW31 735 aaPredicted RBP7.68□□□□□ -1.18
USP8-216ENST00000561206 CALR3Q96L12 384 aaKnown RBP7.68□□□□□ -1.18
USP8-216ENST00000561206 TMEM265A0A087WTH1 108 aa7.67□□□□□ -1.18
USP8-216ENST00000561206 ELOAQ14241 798 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms